Gene annotation
Transcriptome id Sobic.006G141900.1
Synonym Sb06g022080
Functional annotation expressed protein
UniProt A0A1Z5RDU0
Pfam PF02365
Panther DB PTHR31989 PTHR31989:SF34
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT5G22380 : NAC domain containing protein 90
RAP-DB (Rice) LOC_Os04g42940.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium KQJ83490
Barley HORVU0Hr1G005130.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G182601 - -
2 Sobic.003G178101 - K09490: HSPA5, endoplasmic reticulum chaperone BiP
3 Sobic.002G099500 expressed protein -
4 Sobic.003G053001 - -
5 Sobic.001G030800 RD26, putative, expressed -
6 Sobic.001G183900 expressed protein -
7 Sobic.003G384650 - -
8 Sobic.003G072100 D-mannose binding lectin family protein, expressed -
9 Sobic.004G123801 - -
10 Sobic.006G190950 - K10706: SETX, senataxin
11 Sobic.002G032033 - -
12 Sobic.004G171350 - -
13 Sobic.004G246950 - -
14 Sobic.005G216866 - -
15 Sobic.001G539100 - -
16 Sobic.002G430601 - -
17 Sobic.004G224350 - -
18 Sobic.001G018700 RD26, putative, expressed -
19 Sobic.001G018700 RD26, putative, expressed -
20 Sobic.001G018700 RD26, putative, expressed -


Gene co-expression network
sample Sobic006G141900 Sobic006G141900 Sobic002G182601 Sobic002G182601 Sobic006G141900--Sobic002G182601 Sobic003G178101 Sobic003G178101 Sobic006G141900--Sobic003G178101 Sobic002G099500 Sobic002G099500 Sobic006G141900--Sobic002G099500 Sobic003G053001 Sobic003G053001 Sobic006G141900--Sobic003G053001 Sobic001G030800 Sobic001G030800 Sobic006G141900--Sobic001G030800 Sobic001G183900 Sobic001G183900 Sobic006G141900--Sobic001G183900 Sobic003G384650 Sobic003G384650 Sobic006G141900--Sobic003G384650 Sobic003G072100 Sobic003G072100 Sobic006G141900--Sobic003G072100 Sobic004G123801 Sobic004G123801 Sobic006G141900--Sobic004G123801 Sobic005G102750 Sobic005G102750 Sobic002G182601--Sobic005G102750 Sobic003G094850 Sobic003G094850 Sobic002G182601--Sobic003G094850 Sobic005G190400 Sobic005G190400 Sobic002G182601--Sobic005G190400 Sobic001G539100 Sobic001G539100 Sobic002G182601--Sobic001G539100 Sobic002G182601--Sobic001G030800 Sobic003G066200 Sobic003G066200 Sobic002G182601--Sobic003G066200 Sobic002G182601--Sobic003G178101 Sobic005G193900 Sobic005G193900 Sobic002G182601--Sobic005G193900 Sobic004G171350 Sobic004G171350 Sobic002G182601--Sobic004G171350 Sobic003G178101--Sobic003G384650 Sobic003G178101--Sobic001G030800 Sobic001G018700 Sobic001G018700 Sobic003G178101--Sobic001G018700 Sobic002G099500--Sobic003G384650 Sobic002G099500--Sobic003G178101 Sobic002G099500--Sobic003G072100 Sobic002G099500--Sobic001G018700 Sobic002G064450 Sobic002G064450 Sobic003G053001--Sobic002G064450 Sobic003G053001--Sobic004G123801 Sobic003G053001--Sobic004G171350 Sobic004G098650 Sobic004G098650 Sobic003G053001--Sobic004G098650 Sobic003G053001--Sobic003G178101 Sobic003G053001--Sobic001G030800 Sobic009G072066 Sobic009G072066 Sobic003G053001--Sobic009G072066 Sobic003G053001--Sobic003G384650 Sobic003G053001--Sobic001G018700 Sobic001G030800--Sobic001G018700 Sobic001G183900--Sobic003G072100 Sobic004G246950 Sobic004G246950 Sobic001G183900--Sobic004G246950 Sobic002G032033 Sobic002G032033 Sobic001G183900--Sobic002G032033 Sobic001G183900--Sobic001G018700 Sobic003G384650--Sobic003G178101 Sobic003G384650--Sobic001G018700 Sobic006G089200 Sobic006G089200 Sobic003G072100--Sobic006G089200 Sobic003G072100--Sobic001G018700 Sobic004G123801--Sobic003G178101 Sobic004G123801--Sobic001G030800 Sobic004G123801--Sobic003G384650 Sobic004G123801--Sobic001G018700
Octagon: transcription factors


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