Gene annotation
Transcriptome id Sobic.006G246700.1
Synonym BPM1, ATBPM1
Functional annotation MBTB57 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed
UniProt A0A1B6PNR3
Pfam PF00651
Panther DB PTHR26379 PTHR26379:SF167
NCBI CDD KOG1987; Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G19000 : BTB-POZ and MATH domain 1
RAP-DB (Rice) LOC_Os10g29790.1 : MBTB57 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU5Hr1G094190.1 , HORVU5Hr1G094190.2
Wheat TraesCS5B02G385800
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G151650 - -
2 Sobic.010G151325 - -
3 Sobic.004G113500 tRNA-splicing endonuclease positive effector-related, putative, expressed K10706: SETX, senataxin
4 Sobic.008G146801 - -
5 Sobic.001G374301 - -
6 Sobic.005G017632 - -
7 Sobic.001G018700 RD26, putative, expressed -
8 Sobic.001G018700 RD26, putative, expressed -
9 Sobic.001G018700 RD26, putative, expressed -
10 Sobic.001G018700 RD26, putative, expressed -
11 Sobic.001G018700 RD26, putative, expressed -
12 Sobic.001G018700 RD26, putative, expressed -
13 Sobic.001G018700 RD26, putative, expressed -
14 Sobic.001G018700 RD26, putative, expressed -
15 Sobic.001G018700 RD26, putative, expressed -
16 Sobic.001G018700 RD26, putative, expressed -
17 Sobic.001G018700 RD26, putative, expressed -
18 Sobic.001G018700 RD26, putative, expressed -
19 Sobic.001G018700 RD26, putative, expressed -
20 Sobic.001G018700 RD26, putative, expressed -


Gene co-expression network
sample Sobic006G246700 Sobic006G246700 Sobic007G151650 Sobic007G151650 Sobic006G246700--Sobic007G151650 Sobic010G151325 Sobic010G151325 Sobic006G246700--Sobic010G151325 Sobic004G113500 Sobic004G113500 Sobic006G246700--Sobic004G113500 Sobic008G146801 Sobic008G146801 Sobic006G246700--Sobic008G146801 Sobic001G374301 Sobic001G374301 Sobic006G246700--Sobic001G374301 Sobic005G017632 Sobic005G017632 Sobic006G246700--Sobic005G017632 Sobic001G018700 Sobic001G018700 Sobic006G246700--Sobic001G018700 Sobic007G151650--Sobic001G018700 Sobic010G151325--Sobic006G246700 Sobic003G021700 Sobic003G021700 Sobic010G151325--Sobic003G021700 Sobic010G151325--Sobic007G151650 Sobic001G495100 Sobic001G495100 Sobic010G151325--Sobic001G495100 Sobic010G151325--Sobic004G113500 Sobic002G074600 Sobic002G074600 Sobic010G151325--Sobic002G074600 Sobic010G151325--Sobic008G146801 Sobic010G151325--Sobic001G374301 Sobic007G146800 Sobic007G146800 Sobic010G151325--Sobic007G146800 Sobic002G032033 Sobic002G032033 Sobic004G113500--Sobic002G032033 Sobic004G113500--Sobic006G246700 Sobic001G183900 Sobic001G183900 Sobic004G113500--Sobic001G183900 Sobic004G113500--Sobic007G151650 Sobic005G216866 Sobic005G216866 Sobic004G113500--Sobic005G216866 Sobic004G224350 Sobic004G224350 Sobic004G113500--Sobic004G224350 Sobic003G072100 Sobic003G072100 Sobic004G113500--Sobic003G072100 Sobic004G246950 Sobic004G246950 Sobic004G113500--Sobic004G246950 Sobic005G167600 Sobic005G167600 Sobic004G113500--Sobic005G167600 Sobic009G219601 Sobic009G219601 Sobic008G146801--Sobic009G219601 Sobic008G146801--Sobic007G151650 Sobic003G094850 Sobic003G094850 Sobic008G146801--Sobic003G094850 Sobic005G102750 Sobic005G102750 Sobic008G146801--Sobic005G102750 Sobic003G066200 Sobic003G066200 Sobic008G146801--Sobic003G066200 Sobic008G146801--Sobic001G018700 Sobic001G374301--Sobic001G018700 Sobic005G017632--Sobic001G018700 Sobic001G018700--Sobic001G018700
Octagon: transcription factors


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