Gene annotation
Transcriptome id Sobic.010G151325.1,Sobic.010G151325.2
Synonym -
Functional annotation -
UniProt A0A1W0VT91 , A0A1W0VT77
Pfam PF03101 PF10551
Panther DB PTHR31669 PTHR31669:SF52
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated


Orthologs (automatic annotation)
TAIR AT4G38180 : FAR1-related sequence 5
RAP-DB (Rice) LOC_Os04g28580.1 : transposon protein, putative, unclassified, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G246700 MBTB57 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
2 Sobic.003G021700 flavonol synthase/flavanone 3-hydroxylase, putative, expressed K05278: flavonol synthase
3 Sobic.007G151650 - -
4 Sobic.001G495100 expressed protein -
5 Sobic.004G113500 tRNA-splicing endonuclease positive effector-related, putative, expressed K10706: SETX, senataxin
6 Sobic.002G074600 - -
7 Sobic.008G146801 - -
8 Sobic.001G374301 - -
9 Sobic.007G146800 late embryogenesis abundant protein, putative, expressed -
10 Sobic.002G064450 - -
11 Sobic.005G017632 - -
12 Sobic.004G246950 - -
13 Sobic.001G018700 RD26, putative, expressed -
14 Sobic.001G018700 RD26, putative, expressed -
15 Sobic.001G018700 RD26, putative, expressed -
16 Sobic.001G018700 RD26, putative, expressed -
17 Sobic.001G018700 RD26, putative, expressed -
18 Sobic.001G018700 RD26, putative, expressed -
19 Sobic.001G018700 RD26, putative, expressed -
20 Sobic.001G018700 RD26, putative, expressed -


Gene co-expression network
sample Sobic010G151325 Sobic010G151325 Sobic006G246700 Sobic006G246700 Sobic010G151325--Sobic006G246700 Sobic003G021700 Sobic003G021700 Sobic010G151325--Sobic003G021700 Sobic007G151650 Sobic007G151650 Sobic010G151325--Sobic007G151650 Sobic001G495100 Sobic001G495100 Sobic010G151325--Sobic001G495100 Sobic004G113500 Sobic004G113500 Sobic010G151325--Sobic004G113500 Sobic002G074600 Sobic002G074600 Sobic010G151325--Sobic002G074600 Sobic008G146801 Sobic008G146801 Sobic010G151325--Sobic008G146801 Sobic001G374301 Sobic001G374301 Sobic010G151325--Sobic001G374301 Sobic007G146800 Sobic007G146800 Sobic010G151325--Sobic007G146800 Sobic006G246700--Sobic007G151650 Sobic006G246700--Sobic010G151325 Sobic006G246700--Sobic004G113500 Sobic006G246700--Sobic008G146801 Sobic006G246700--Sobic001G374301 Sobic005G017632 Sobic005G017632 Sobic006G246700--Sobic005G017632 Sobic001G018700 Sobic001G018700 Sobic006G246700--Sobic001G018700 Sobic003G021700--Sobic001G495100 Sobic003G021700--Sobic007G146800 Sobic003G021700--Sobic001G018700 Sobic007G151650--Sobic001G018700 Sobic001G495100--Sobic003G021700 Sobic001G495100--Sobic007G146800 Sobic001G040900 Sobic001G040900 Sobic001G495100--Sobic001G040900 Sobic010G140300 Sobic010G140300 Sobic001G495100--Sobic010G140300 Sobic008G082450 Sobic008G082450 Sobic001G495100--Sobic008G082450 Sobic001G495100--Sobic001G018700 Sobic002G032033 Sobic002G032033 Sobic004G113500--Sobic002G032033 Sobic004G113500--Sobic006G246700 Sobic001G183900 Sobic001G183900 Sobic004G113500--Sobic001G183900 Sobic004G113500--Sobic007G151650 Sobic005G216866 Sobic005G216866 Sobic004G113500--Sobic005G216866 Sobic004G224350 Sobic004G224350 Sobic004G113500--Sobic004G224350 Sobic003G072100 Sobic003G072100 Sobic004G113500--Sobic003G072100 Sobic004G246950 Sobic004G246950 Sobic004G113500--Sobic004G246950 Sobic005G167600 Sobic005G167600 Sobic004G113500--Sobic005G167600 Sobic002G074600--Sobic003G021700 Sobic010G230100 Sobic010G230100 Sobic002G074600--Sobic010G230100 Sobic002G074600--Sobic001G495100 Sobic002G074600--Sobic005G017632 Sobic004G007550 Sobic004G007550 Sobic002G074600--Sobic004G007550 Sobic003G329100 Sobic003G329100 Sobic002G074600--Sobic003G329100 Sobic001G273600 Sobic001G273600 Sobic002G074600--Sobic001G273600 Sobic002G074600--Sobic007G146800 Sobic002G074600--Sobic007G151650 Sobic009G219601 Sobic009G219601 Sobic008G146801--Sobic009G219601 Sobic008G146801--Sobic007G151650 Sobic003G094850 Sobic003G094850 Sobic008G146801--Sobic003G094850 Sobic005G102750 Sobic005G102750 Sobic008G146801--Sobic005G102750 Sobic003G066200 Sobic003G066200 Sobic008G146801--Sobic003G066200 Sobic008G146801--Sobic001G018700 Sobic001G374301--Sobic001G018700 Sobic007G146800--Sobic010G140300 Sobic007G146800--Sobic008G082450 Sobic006G089200 Sobic006G089200 Sobic007G146800--Sobic006G089200 Sobic007G146800--Sobic001G018700
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.