Gene annotation
Transcriptome id Sobic.007G193900.1
Synonym Sb07g026250
Functional annotation expressed protein
UniProt A0A1B6PIM1
Pfam PF00400
Panther DB PTHR22847 PTHR22847:SF408
NCBI CDD KOG0296; Angio-associated migratory cell protein (contains WD40 repeats) KOG0265U5 snRNP-specific protein-like factor and related proteins KOG0643Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) KOG0286G-protein beta subunit
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G50410 : -
RAP-DB (Rice) LOC_Os08g41900.1 : expressed protein
MaizeGDB (Corn) Zm00025a057082 , Zm00025a030395
Brachypodium PNT68493
Barley HORVU7Hr1G054140.15 , HORVU7Hr1G054140.14 , HORVU7Hr1G054140.17 , HORVU7Hr1G054140.16 , HORVU7Hr1G054140.11 , HORVU7Hr1G054140.10 , HORVU7Hr1G054140.13 , HORVU7Hr1G054140.12 , HORVU7Hr1G054140.19 , HORVU7Hr1G054140.18 , HORVU7Hr1G054140.1 , HORVU7Hr1G054140.3 , HORVU7Hr1G054140.2 , HORVU7Hr1G054140.5 , HORVU7Hr1G054140.4 , HORVU7Hr1G054140.7 , HORVU7Hr1G054140.6 , HORVU7Hr1G054140.9 , HORVU7Hr1G054140.8 , HORVU7Hr1G054140.20 , HORVU7Hr1G054140.21
Wheat TraesCS7A02G260200 , TraesCS7B02G158200 , TraesCS7D02G261200 , TraesCS7D02G261200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G336600 COBRA-like protein precursor, putative, expressed -
2 Sobic.009G160900 expressed protein -
3 Sobic.002G260500 - -
4 Sobic.004G013400 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed K01802: peptidylprolyl isomerase
5 Sobic.008G175933 - -
6 Sobic.003G210701 - -
7 Sobic.009G258200 - -
8 Sobic.005G201800 OsFBX230 - F-box domain containing protein, expressed -
9 Sobic.007G027400 MBTB16 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
10 Sobic.003G190701 - -
11 Sobic.001G358101 - -
12 Sobic.002G046500 gibberellin 20 oxidase 1-B, putative, expressed -
13 Sobic.001G045300 ubiquitin family protein, putative, expressed -
14 Sobic.001G200400 - -
15 Sobic.004G162800 - -
16 Sobic.004G122700 UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed -
17 Sobic.001G234700 AP2 domain containing protein, expressed -
18 Sobic.001G234700 AP2 domain containing protein, expressed -
19 Sobic.001G234700 AP2 domain containing protein, expressed -
20 Sobic.001G234700 AP2 domain containing protein, expressed -


Gene co-expression network
sample Sobic007G193900 Sobic007G193900 Sobic001G336600 Sobic001G336600 Sobic007G193900--Sobic001G336600 Sobic009G160900 Sobic009G160900 Sobic007G193900--Sobic009G160900 Sobic002G260500 Sobic002G260500 Sobic007G193900--Sobic002G260500 Sobic004G013400 Sobic004G013400 Sobic007G193900--Sobic004G013400 Sobic008G175933 Sobic008G175933 Sobic007G193900--Sobic008G175933 Sobic003G210701 Sobic003G210701 Sobic007G193900--Sobic003G210701 Sobic009G258200 Sobic009G258200 Sobic007G193900--Sobic009G258200 Sobic005G201800 Sobic005G201800 Sobic007G193900--Sobic005G201800 Sobic007G027400 Sobic007G027400 Sobic007G193900--Sobic007G027400 Sobic001G336600--Sobic007G193900 Sobic003G352750 Sobic003G352750 Sobic001G336600--Sobic003G352750 Sobic008G131601 Sobic008G131601 Sobic001G336600--Sobic008G131601 Sobic001G336600--Sobic009G160900 Sobic006G144900 Sobic006G144900 Sobic001G336600--Sobic006G144900 Sobic009G203600 Sobic009G203600 Sobic001G336600--Sobic009G203600 Sobic001G336600--Sobic002G260500 Sobic003G387400 Sobic003G387400 Sobic001G336600--Sobic003G387400 Sobic002G345100 Sobic002G345100 Sobic001G336600--Sobic002G345100 Sobic009G160900--Sobic002G260500 Sobic004G173800 Sobic004G173800 Sobic009G160900--Sobic004G173800 Sobic009G160900--Sobic004G013400 Sobic006G004700 Sobic006G004700 Sobic009G160900--Sobic006G004700 Sobic002G063500 Sobic002G063500 Sobic009G160900--Sobic002G063500 Sobic008G053700 Sobic008G053700 Sobic009G160900--Sobic008G053700 Sobic007G087500 Sobic007G087500 Sobic009G160900--Sobic007G087500 Sobic008G069901 Sobic008G069901 Sobic009G160900--Sobic008G069901 Sobic003G046000 Sobic003G046000 Sobic009G160900--Sobic003G046000 Sobic002G260500--Sobic004G173800 Sobic002G260500--Sobic008G053700 Sobic002G260500--Sobic006G004700 Sobic002G260500--Sobic003G046000 Sobic002G260500--Sobic008G069901 Sobic006G076700 Sobic006G076700 Sobic002G260500--Sobic006G076700 Sobic004G184900 Sobic004G184900 Sobic002G260500--Sobic004G184900 Sobic006G258200 Sobic006G258200 Sobic002G260500--Sobic006G258200 Sobic001G160300 Sobic001G160300 Sobic002G260500--Sobic001G160300 Sobic001G190600 Sobic001G190600 Sobic004G013400--Sobic001G190600 Sobic008G008601 Sobic008G008601 Sobic004G013400--Sobic008G008601 Sobic004G122700 Sobic004G122700 Sobic004G013400--Sobic004G122700 Sobic006G137900 Sobic006G137900 Sobic004G013400--Sobic006G137900 Sobic001G452300 Sobic001G452300 Sobic004G013400--Sobic001G452300 Sobic001G138500 Sobic001G138500 Sobic004G013400--Sobic001G138500 Sobic008G008701 Sobic008G008701 Sobic004G013400--Sobic008G008701 Sobic005G207550 Sobic005G207550 Sobic004G013400--Sobic005G207550 Sobic003G120050 Sobic003G120050 Sobic004G013400--Sobic003G120050 Sobic004G090900 Sobic004G090900 Sobic008G175933--Sobic004G090900 Sobic008G175933--Sobic004G122700 Sobic008G175933--Sobic008G008701 Sobic001G033701 Sobic001G033701 Sobic008G175933--Sobic001G033701 Sobic002G046500 Sobic002G046500 Sobic008G175933--Sobic002G046500 Sobic001G045300 Sobic001G045300 Sobic008G175933--Sobic001G045300 Sobic008G175933--Sobic007G027400 Sobic009G142600 Sobic009G142600 Sobic008G175933--Sobic009G142600 Sobic002G084100 Sobic002G084100 Sobic008G175933--Sobic002G084100 Sobic001G234700 Sobic001G234700 Sobic003G210701--Sobic001G234700 Sobic008G045900 Sobic008G045900 Sobic009G258200--Sobic008G045900 Sobic009G258200--Sobic009G142600 Sobic005G205000 Sobic005G205000 Sobic009G258200--Sobic005G205000 Sobic003G083100 Sobic003G083100 Sobic009G258200--Sobic003G083100 Sobic005G120433 Sobic005G120433 Sobic009G258200--Sobic005G120433 Sobic008G045100 Sobic008G045100 Sobic009G258200--Sobic008G045100 Sobic009G258200--Sobic001G234700 Sobic001G200400 Sobic001G200400 Sobic005G201800--Sobic001G200400 Sobic003G190701 Sobic003G190701 Sobic005G201800--Sobic003G190701 Sobic005G201800--Sobic001G234700 Sobic007G027400--Sobic001G045300 Sobic007G027400--Sobic002G046500 Sobic001G358101 Sobic001G358101 Sobic007G027400--Sobic001G358101 Sobic007G027400--Sobic004G090900 Sobic004G162800 Sobic004G162800 Sobic007G027400--Sobic004G162800 Sobic003G245101 Sobic003G245101 Sobic007G027400--Sobic003G245101 Sobic007G027400--Sobic002G084100 Sobic007G027400--Sobic003G190701 Sobic007G027400--Sobic008G008701
Octagon: transcription factors


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