Gene annotation
Transcriptome id Sobic.007G205400.1
Synonym ethylene response factor 88, Sb07g027280, SbERF88
Functional annotation Not investigated (PubMedID : 23766026)
AP2 domain containing protein, expressed
UniProt A0A1Z5RAV9
Pfam PF00847
Panther DB PTHR31241 PTHR31241:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT5G21960 : Integrase-type DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os06g09810.1 : ethylene-responsive transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a005140
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G186300 - -
2 Sobic.002G192600 no apical meristem protein, putative, expressed -
3 Sobic.010G060100 leucoanthocyanidin dioxygenase, putative, expressed -
4 Sobic.004G133600 Sugar transporter(PubMedID : 27330561)@"ZmSWEET4c(Ortholog in maize:Sosso et al., 2015(PubMedID : 31659882)@Zhang et al., 2015)"(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
5 Sobic.009G061900 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
6 Sobic.002G078800 LTPL169 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
7 Sobic.001G200900 LTPL160 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
8 Sobic.002G409250 - -
9 Sobic.002G409300 expressed protein -
10 Sobic.006G015750 - -
11 Sobic.003G091400 seven in absentia protein family domain containing protein, expressed -
12 Sobic.009G052400 inorganic H+ pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
13 Sobic.007G187100 terpene synthase, putative, expressed -
14 Sobic.001G129900 indole-3-acetate beta-glucosyltransferase, putative, expressed K13692: UDP-glucose:(indol-3-yl)acetate beta-D-glucosyltransferase
15 Sobic.005G077900 OsFBX411 - F-box domain containing protein, expressed -
16 Sobic.005G174000 - -
17 Sobic.006G080500 helix-loop-helix DNA-binding domain containing protein, expressed -
18 Sobic.002G381600 uncharacterized glycosyl hydrolase Rv2006/MT2062, putative, expressed K01087: trehalose 6-phosphate phosphatase
19 Sobic.005G079300 terpene synthase, putative, expressed -
20 Sobic.002G293100 ZOS9-17 - C2H2 zinc finger protein, expressed -


Gene co-expression network
sample Sobic007G205400 Sobic007G205400 Sobic005G186300 Sobic005G186300 Sobic007G205400--Sobic005G186300 Sobic002G192600 Sobic002G192600 Sobic007G205400--Sobic002G192600 Sobic010G060100 Sobic010G060100 Sobic007G205400--Sobic010G060100 Sobic004G133600 Sobic004G133600 Sobic007G205400--Sobic004G133600 Sobic009G061900 Sobic009G061900 Sobic007G205400--Sobic009G061900 Sobic002G078800 Sobic002G078800 Sobic007G205400--Sobic002G078800 Sobic001G200900 Sobic001G200900 Sobic007G205400--Sobic001G200900 Sobic002G409250 Sobic002G409250 Sobic007G205400--Sobic002G409250 Sobic002G409300 Sobic002G409300 Sobic007G205400--Sobic002G409300 Sobic005G186300--Sobic002G192600 Sobic005G186300--Sobic009G061900 Sobic005G186300--Sobic007G205400 Sobic005G186300--Sobic002G409300 Sobic005G186300--Sobic001G200900 Sobic007G187100 Sobic007G187100 Sobic005G186300--Sobic007G187100 Sobic005G186300--Sobic004G133600 Sobic005G186300--Sobic002G078800 Sobic005G174000 Sobic005G174000 Sobic005G186300--Sobic005G174000 Sobic002G192600--Sobic004G133600 Sobic002G192600--Sobic005G186300 Sobic009G052400 Sobic009G052400 Sobic002G192600--Sobic009G052400 Sobic002G192600--Sobic002G078800 Sobic001G129900 Sobic001G129900 Sobic002G192600--Sobic001G129900 Sobic002G192600--Sobic009G061900 Sobic002G192600--Sobic007G205400 Sobic006G080500 Sobic006G080500 Sobic002G192600--Sobic006G080500 Sobic006G015750 Sobic006G015750 Sobic002G192600--Sobic006G015750 Sobic010G060100--Sobic004G133600 Sobic010G060100--Sobic007G205400 Sobic010G060100--Sobic002G192600 Sobic010G060100--Sobic001G129900 Sobic002G381600 Sobic002G381600 Sobic010G060100--Sobic002G381600 Sobic010G060100--Sobic007G187100 Sobic010G060100--Sobic009G061900 Sobic010G060100--Sobic009G052400 Sobic005G079300 Sobic005G079300 Sobic010G060100--Sobic005G079300 Sobic004G133600--Sobic002G192600 Sobic004G133600--Sobic010G060100 Sobic004G133600--Sobic009G052400 Sobic004G133600--Sobic001G129900 Sobic004G133600--Sobic007G205400 Sobic004G133600--Sobic002G381600 Sobic004G133600--Sobic006G080500 Sobic004G133600--Sobic005G079300 Sobic004G133600--Sobic009G061900 Sobic009G061900--Sobic007G187100 Sobic009G061900--Sobic005G186300 Sobic009G061900--Sobic001G200900 Sobic009G061900--Sobic002G192600 Sobic009G061900--Sobic002G409300 Sobic009G061900--Sobic009G052400 Sobic009G061900--Sobic001G129900 Sobic009G061900--Sobic004G133600 Sobic009G061900--Sobic005G174000 Sobic002G078800--Sobic006G015750 Sobic003G091400 Sobic003G091400 Sobic002G078800--Sobic003G091400 Sobic002G078800--Sobic002G409250 Sobic002G078800--Sobic002G192600 Sobic002G078800--Sobic006G080500 Sobic006G178400 Sobic006G178400 Sobic002G078800--Sobic006G178400 Sobic002G078800--Sobic009G052400 Sobic003G135000 Sobic003G135000 Sobic002G078800--Sobic003G135000 Sobic005G193700 Sobic005G193700 Sobic002G078800--Sobic005G193700 Sobic001G200900--Sobic005G174000 Sobic004G171600 Sobic004G171600 Sobic001G200900--Sobic004G171600 Sobic001G200900--Sobic009G061900 Sobic005G077900 Sobic005G077900 Sobic001G200900--Sobic005G077900 Sobic001G200900--Sobic005G186300 Sobic001G200900--Sobic002G192600 Sobic002G293100 Sobic002G293100 Sobic001G200900--Sobic002G293100 Sobic001G200900--Sobic009G052400 Sobic001G233600 Sobic001G233600 Sobic001G200900--Sobic001G233600 Sobic002G409250--Sobic003G091400 Sobic002G409250--Sobic006G015750 Sobic002G409250--Sobic002G078800 Sobic002G409250--Sobic005G193700 Sobic001G253400 Sobic001G253400 Sobic002G409250--Sobic001G253400 Sobic002G409250--Sobic006G178400 Sobic002G409250--Sobic002G192600 Sobic002G409250--Sobic006G080500 Sobic002G409250--Sobic003G135000 Sobic009G021400 Sobic009G021400 Sobic002G409300--Sobic009G021400 Sobic002G409300--Sobic009G061900 Sobic002G409300--Sobic005G186300 Sobic003G106400 Sobic003G106400 Sobic002G409300--Sobic003G106400 Sobic001G274025 Sobic001G274025 Sobic002G409300--Sobic001G274025 Sobic002G409300--Sobic007G187100 Sobic001G489075 Sobic001G489075 Sobic002G409300--Sobic001G489075 Sobic002G409300--Sobic001G200900 Sobic002G409300--Sobic007G205400
Octagon: transcription factors


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