Gene annotation
Transcriptome id Sobic.008G108800.2
Synonym Sb08g016320, FRS5
Functional annotation FAR1 family protein, expressed
UniProt A0A1Z5R5Z4
Pfam PF04434 PF03101 PF10551
Panther DB PTHR31669 PTHR31669:SF52
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008270; zinc ion binding GO:0006355regulation of transcription, DNA-templated


Orthologs (automatic annotation)
TAIR AT4G38180 : FAR1-related sequence 5
RAP-DB (Rice) LOC_Os01g19050.1 : transposon protein, putative, unclassified, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G048100 - -
2 Sobic.004G243700 - -
3 Sobic.002G384600 expressed protein -
4 Sobic.002G153900 ZOS9-02 - C2H2 zinc finger protein, expressed -
5 Sobic.003G126750 - -
6 Sobic.004G358200 RING-H2 finger protein, putative, expressed -
7 Sobic.002G026150 - -
8 Sobic.006G109600 - -
9 Sobic.005G031901 - -
10 Sobic.006G026300 expressed protein -
11 Sobic.010G147300 CAF1 family ribonuclease containing protein, putative, expressed K12581: CNOT7_8, CAF1, CCR4-NOT transcription complex subunit 7/8
12 Sobic.004G358301 - -
13 Sobic.001G261464 - -
14 Sobic.002G100100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.008G139250 - -
16 Sobic.002G397300 thiol protease SEN102 precursor, putative, expressed -
17 Sobic.002G175700 STE_MEK_ste7_MAP2K.3 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K04368: MAP2K1, mitogen-activated protein kinase kinase 1
18 Sobic.007G064000 expressed protein -
19 Sobic.007G048400 berberine and berberine like domain containing protein, expressed -
20 Sobic.002G397650 - -


Gene co-expression network
sample Sobic008G108800 Sobic008G108800 Sobic005G048100 Sobic005G048100 Sobic008G108800--Sobic005G048100 Sobic004G243700 Sobic004G243700 Sobic008G108800--Sobic004G243700 Sobic002G384600 Sobic002G384600 Sobic008G108800--Sobic002G384600 Sobic002G153900 Sobic002G153900 Sobic008G108800--Sobic002G153900 Sobic003G126750 Sobic003G126750 Sobic008G108800--Sobic003G126750 Sobic004G358200 Sobic004G358200 Sobic008G108800--Sobic004G358200 Sobic002G026150 Sobic002G026150 Sobic008G108800--Sobic002G026150 Sobic006G109600 Sobic006G109600 Sobic008G108800--Sobic006G109600 Sobic005G031901 Sobic005G031901 Sobic008G108800--Sobic005G031901 Sobic005G048100--Sobic004G358200 Sobic005G048100--Sobic003G126750 Sobic001G261464 Sobic001G261464 Sobic005G048100--Sobic001G261464 Sobic008G139250 Sobic008G139250 Sobic005G048100--Sobic008G139250 Sobic005G048100--Sobic002G026150 Sobic005G048100--Sobic004G243700 Sobic006G026300 Sobic006G026300 Sobic005G048100--Sobic006G026300 Sobic005G048100--Sobic006G109600 Sobic005G048100--Sobic002G153900 Sobic004G243700--Sobic003G126750 Sobic004G243700--Sobic001G261464 Sobic002G100100 Sobic002G100100 Sobic004G243700--Sobic002G100100 Sobic004G243700--Sobic006G109600 Sobic004G243700--Sobic005G031901 Sobic010G147300 Sobic010G147300 Sobic004G243700--Sobic010G147300 Sobic004G243700--Sobic002G026150 Sobic004G243700--Sobic006G026300 Sobic004G243700--Sobic004G358200 Sobic002G384600--Sobic002G153900 Sobic002G384600--Sobic006G026300 Sobic004G358301 Sobic004G358301 Sobic002G384600--Sobic004G358301 Sobic002G384600--Sobic005G031901 Sobic002G384600--Sobic004G358200 Sobic002G384600--Sobic001G261464 Sobic002G384600--Sobic006G109600 Sobic002G384600--Sobic002G026150 Sobic002G384600--Sobic010G147300 Sobic002G153900--Sobic003G126750 Sobic002G153900--Sobic004G358200 Sobic002G153900--Sobic001G261464 Sobic002G153900--Sobic002G026150 Sobic002G153900--Sobic006G026300 Sobic002G153900--Sobic006G109600 Sobic002G153900--Sobic005G031901 Sobic002G153900--Sobic004G358301 Sobic002G153900--Sobic002G100100 Sobic003G126750--Sobic006G109600 Sobic003G126750--Sobic005G031901 Sobic003G126750--Sobic002G026150 Sobic003G126750--Sobic001G261464 Sobic003G126750--Sobic010G147300 Sobic003G126750--Sobic002G100100 Sobic003G126750--Sobic004G358301 Sobic003G126750--Sobic004G243700 Sobic003G126750--Sobic002G153900 Sobic004G358200--Sobic001G261464 Sobic004G358200--Sobic003G126750 Sobic004G358200--Sobic002G153900 Sobic004G358200--Sobic005G031901 Sobic004G358200--Sobic006G109600 Sobic004G358200--Sobic006G026300 Sobic004G358200--Sobic002G100100 Sobic004G358200--Sobic004G243700 Sobic004G358200--Sobic002G026150 Sobic002G026150--Sobic003G126750 Sobic002G026150--Sobic006G109600 Sobic002G026150--Sobic005G031901 Sobic002G026150--Sobic001G261464 Sobic002G026150--Sobic010G147300 Sobic002G026150--Sobic004G358301 Sobic002G026150--Sobic002G100100 Sobic002G026150--Sobic002G153900 Sobic002G026150--Sobic004G243700 Sobic006G109600--Sobic003G126750 Sobic006G109600--Sobic005G031901 Sobic006G109600--Sobic010G147300 Sobic006G109600--Sobic001G261464 Sobic006G109600--Sobic002G100100 Sobic006G109600--Sobic002G026150 Sobic002G175700 Sobic002G175700 Sobic006G109600--Sobic002G175700 Sobic006G109600--Sobic004G358301 Sobic006G109600--Sobic004G243700 Sobic005G031901--Sobic010G147300 Sobic005G031901--Sobic006G109600 Sobic005G031901--Sobic003G126750 Sobic005G031901--Sobic001G261464 Sobic005G031901--Sobic004G358301 Sobic005G031901--Sobic002G100100 Sobic005G031901--Sobic002G026150 Sobic005G031901--Sobic002G175700 Sobic007G064000 Sobic007G064000 Sobic005G031901--Sobic007G064000
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.