Gene annotation
Transcriptome id Sobic.008G153900.1
Synonym PIF4, SRL2, Sb08g020290
Functional annotation helix-loop-helix DNA-binding domain containing protein, expressed
UniProt A0A1Z5R6W9
Pfam PF00010
Panther DB PTHR12565 PTHR12565:SF134
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G20180 : phytochrome interacting factor 3-like 5
RAP-DB (Rice) LOC_Os12g40590.1 : helix-loop-helix DNA-binding domain containing protein, expressed
MaizeGDB (Corn) Zm00025a004582
Brachypodium KQJ85972
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G141001 - -
2 Sobic.004G082200 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed -
3 Sobic.006G053500 expressed protein K10990: RMI1, RecQ-mediated genome instability protein 1
4 Sobic.004G019900 GTP-binding protein, putative, expressed -
5 Sobic.003G091100 seven in absentia protein family domain containing protein, expressed -
6 Sobic.004G131350 - -
7 Sobic.010G091366 - -
8 Sobic.001G218701 - -
9 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
10 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
11 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
12 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
13 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
14 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
15 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
16 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
17 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
18 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
19 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
20 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic008G153900 Sobic008G153900 Sobic007G141001 Sobic007G141001 Sobic008G153900--Sobic007G141001 Sobic004G082200 Sobic004G082200 Sobic008G153900--Sobic004G082200 Sobic006G053500 Sobic006G053500 Sobic008G153900--Sobic006G053500 Sobic004G019900 Sobic004G019900 Sobic008G153900--Sobic004G019900 Sobic003G091100 Sobic003G091100 Sobic008G153900--Sobic003G091100 Sobic004G131350 Sobic004G131350 Sobic008G153900--Sobic004G131350 Sobic010G091366 Sobic010G091366 Sobic008G153900--Sobic010G091366 Sobic001G218701 Sobic001G218701 Sobic008G153900--Sobic001G218701 Sobic001G272300 Sobic001G272300 Sobic008G153900--Sobic001G272300 Sobic007G141001--Sobic001G218701 Sobic008G154000 Sobic008G154000 Sobic007G141001--Sobic008G154000 Sobic007G141001--Sobic003G091100 Sobic007G141001--Sobic001G272300 Sobic007G005800 Sobic007G005800 Sobic004G082200--Sobic007G005800 Sobic001G497750 Sobic001G497750 Sobic004G082200--Sobic001G497750 Sobic007G154901 Sobic007G154901 Sobic004G082200--Sobic007G154901 Sobic004G082200--Sobic008G154000 Sobic004G082200--Sobic003G091100 Sobic001G530650 Sobic001G530650 Sobic004G082200--Sobic001G530650 Sobic004G082200--Sobic001G272300 Sobic003G034250 Sobic003G034250 Sobic006G053500--Sobic003G034250 Sobic006G053500--Sobic008G154000 Sobic006G053500--Sobic003G091100 Sobic010G229200 Sobic010G229200 Sobic006G053500--Sobic010G229200 Sobic006G053500--Sobic001G218701 Sobic007G024900 Sobic007G024900 Sobic006G053500--Sobic007G024900 Sobic007G100275 Sobic007G100275 Sobic006G053500--Sobic007G100275 Sobic003G058400 Sobic003G058400 Sobic006G053500--Sobic003G058400 SobicK042700 SobicK042700 Sobic006G053500--SobicK042700 Sobic006G178200 Sobic006G178200 Sobic004G019900--Sobic006G178200 Sobic005G082950 Sobic005G082950 Sobic004G019900--Sobic005G082950 Sobic009G147100 Sobic009G147100 Sobic004G019900--Sobic009G147100 Sobic004G019900--Sobic003G091100 Sobic002G302400 Sobic002G302400 Sobic004G019900--Sobic002G302400 Sobic004G019900--Sobic001G272300 Sobic003G091100--SobicK042700 Sobic003G091100--Sobic001G272300 Sobic004G131350--Sobic008G153900 Sobic004G131350--Sobic006G053500 Sobic004G131350--Sobic010G091366 Sobic001G318366 Sobic001G318366 Sobic004G131350--Sobic001G318366 Sobic004G131350--Sobic004G082200 Sobic004G131350--Sobic007G141001 Sobic004G338400 Sobic004G338400 Sobic004G131350--Sobic004G338400 Sobic001G041450 Sobic001G041450 Sobic004G131350--Sobic001G041450 Sobic005G156800 Sobic005G156800 Sobic004G131350--Sobic005G156800 Sobic005G181700 Sobic005G181700 Sobic010G091366--Sobic005G181700 Sobic002G069601 Sobic002G069601 Sobic010G091366--Sobic002G069601 Sobic003G318400 Sobic003G318400 Sobic010G091366--Sobic003G318400 Sobic007G059800 Sobic007G059800 Sobic010G091366--Sobic007G059800 Sobic010G091366--Sobic003G034250 Sobic010G091366--Sobic006G053500 Sobic010G091366--Sobic004G082200 Sobic009G150100 Sobic009G150100 Sobic010G091366--Sobic009G150100 Sobic004G201200 Sobic004G201200 Sobic010G091366--Sobic004G201200 Sobic001G218701--Sobic001G272300 Sobic001G272300--Sobic001G272300
Octagon: transcription factors


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