Gene annotation
Transcriptome id Sobic.004G131350.1
Synonym -
Functional annotation -
UniProt A0A1Z5RM59
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os07g22110.1 : retrotransposon, putative, centromere-specific, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G153900 helix-loop-helix DNA-binding domain containing protein, expressed -
2 Sobic.006G053500 expressed protein K10990: RMI1, RecQ-mediated genome instability protein 1
3 Sobic.010G091366 - -
4 Sobic.001G318366 - -
5 Sobic.004G082200 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed -
6 Sobic.007G141001 - -
7 Sobic.004G338400 "TH1(Ortholog in rice:Li et al., 2012)"(PubMedID : 31659894)@DUF640 domain containing protein, putative, expressed -
8 Sobic.001G041450 - -
9 Sobic.005G156800 UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed -
10 Sobic.002G380750 - -
11 Sobic.001G267400 - -
12 Sobic.001G452400 OsFBX81 - F-box domain containing protein, expressed -
13 Sobic.003G091100 seven in absentia protein family domain containing protein, expressed -
14 Sobic.008G154000 helix-loop-helix DNA-binding domain containing protein, expressed -
15 Sobic.010G021600 - -
16 Sobic.003G034250 - -
17 Sobic.001G493300 glycerol-3-phosphate acyltransferase, putative, expressed -
18 Sobic.007G154901 - K01674: carbonic anhydrase
19 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
20 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic004G131350 Sobic004G131350 Sobic008G153900 Sobic008G153900 Sobic004G131350--Sobic008G153900 Sobic006G053500 Sobic006G053500 Sobic004G131350--Sobic006G053500 Sobic010G091366 Sobic010G091366 Sobic004G131350--Sobic010G091366 Sobic001G318366 Sobic001G318366 Sobic004G131350--Sobic001G318366 Sobic004G082200 Sobic004G082200 Sobic004G131350--Sobic004G082200 Sobic007G141001 Sobic007G141001 Sobic004G131350--Sobic007G141001 Sobic004G338400 Sobic004G338400 Sobic004G131350--Sobic004G338400 Sobic001G041450 Sobic001G041450 Sobic004G131350--Sobic001G041450 Sobic005G156800 Sobic005G156800 Sobic004G131350--Sobic005G156800 Sobic008G153900--Sobic007G141001 Sobic008G153900--Sobic004G082200 Sobic008G153900--Sobic006G053500 Sobic004G019900 Sobic004G019900 Sobic008G153900--Sobic004G019900 Sobic003G091100 Sobic003G091100 Sobic008G153900--Sobic003G091100 Sobic008G153900--Sobic004G131350 Sobic008G153900--Sobic010G091366 Sobic001G218701 Sobic001G218701 Sobic008G153900--Sobic001G218701 Sobic001G272300 Sobic001G272300 Sobic008G153900--Sobic001G272300 Sobic003G034250 Sobic003G034250 Sobic006G053500--Sobic003G034250 Sobic008G154000 Sobic008G154000 Sobic006G053500--Sobic008G154000 Sobic006G053500--Sobic003G091100 Sobic010G229200 Sobic010G229200 Sobic006G053500--Sobic010G229200 Sobic006G053500--Sobic001G218701 Sobic007G024900 Sobic007G024900 Sobic006G053500--Sobic007G024900 Sobic007G100275 Sobic007G100275 Sobic006G053500--Sobic007G100275 Sobic003G058400 Sobic003G058400 Sobic006G053500--Sobic003G058400 SobicK042700 SobicK042700 Sobic006G053500--SobicK042700 Sobic005G181700 Sobic005G181700 Sobic010G091366--Sobic005G181700 Sobic002G069601 Sobic002G069601 Sobic010G091366--Sobic002G069601 Sobic003G318400 Sobic003G318400 Sobic010G091366--Sobic003G318400 Sobic007G059800 Sobic007G059800 Sobic010G091366--Sobic007G059800 Sobic010G091366--Sobic003G034250 Sobic010G091366--Sobic006G053500 Sobic010G091366--Sobic004G082200 Sobic009G150100 Sobic009G150100 Sobic010G091366--Sobic009G150100 Sobic004G201200 Sobic004G201200 Sobic010G091366--Sobic004G201200 Sobic001G530650 Sobic001G530650 Sobic001G318366--Sobic001G530650 Sobic001G497750 Sobic001G497750 Sobic001G318366--Sobic001G497750 Sobic007G005800 Sobic007G005800 Sobic001G318366--Sobic007G005800 Sobic009G147100 Sobic009G147100 Sobic001G318366--Sobic009G147100 Sobic001G318366--Sobic001G272300 Sobic004G082200--Sobic007G005800 Sobic004G082200--Sobic001G497750 Sobic007G154901 Sobic007G154901 Sobic004G082200--Sobic007G154901 Sobic004G082200--Sobic008G154000 Sobic004G082200--Sobic003G091100 Sobic004G082200--Sobic001G530650 Sobic004G082200--Sobic001G272300 Sobic007G141001--Sobic001G218701 Sobic007G141001--Sobic008G154000 Sobic007G141001--Sobic003G091100 Sobic007G141001--Sobic001G272300 Sobic004G338400--Sobic010G091366 Sobic004G338400--Sobic005G156800 Sobic004G338400--Sobic004G082200 Sobic002G380750 Sobic002G380750 Sobic004G338400--Sobic002G380750 Sobic004G338400--Sobic006G053500 Sobic004G338400--Sobic005G181700 Sobic001G307450 Sobic001G307450 Sobic004G338400--Sobic001G307450 Sobic004G338400--Sobic007G141001 Sobic004G338400--Sobic003G034250 Sobic001G041450--Sobic001G272300 Sobic005G156800--Sobic002G380750 Sobic001G452400 Sobic001G452400 Sobic005G156800--Sobic001G452400 Sobic010G021600 Sobic010G021600 Sobic005G156800--Sobic010G021600 Sobic001G493300 Sobic001G493300 Sobic005G156800--Sobic001G493300 Sobic005G156800--Sobic001G272300
Octagon: transcription factors


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