Gene annotation
Transcriptome id Sobic.009G079801.1
Synonym -
Functional annotation -
UniProt A0A1Z5R1F7
Pfam PF00071
Panther DB PTHR24073 PTHR24073:SF553
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0007264; small GTPase mediated signal transduction GO:0005525GTP binding


Orthologs (automatic annotation)
TAIR AT1G16920 : RAB GTPase homolog A1B
RAP-DB (Rice) LOC_Os06g35814.1 : ras-related protein, putative, expressed
MaizeGDB (Corn) Zm00025a039651 , Zm00025a046500 , Zm00025a036613 , Zm00025a044235 , Zm00025a008844 , Zm00025a037063 , Zm00025a043281 , Zm00025a016417 , Zm00025a028122 , Zm00025a042339 , Zm00025a008978 , Zm00025a051086 , Zm00025a044575 , Zm00025a013755 , Zm00025a038289
Brachypodium KQK10571 , KQK12398 , KQK06841 , KQK12397 , KQK09101 , PNT64397 , KQJ98137 , KQJ98073 , KQK12193 , KQK08122 , PNT73882 , KQK18040 , KQK10572 , KQK09739
Barley HORVU7Hr1G089120.1 , HORVU7Hr1G089120.2 , HORVU5Hr1G056470.1 , HORVU5Hr1G120210.2 , HORVU5Hr1G120210.1 , HORVU5Hr1G120210.4 , HORVU3Hr1G071740.6 , HORVU3Hr1G071740.4 , HORVU3Hr1G071740.1 , HORVU3Hr1G061000.1 , HORVU3Hr1G061000.3 , HORVU3Hr1G061000.4 , HORVU3Hr1G061000.5 , HORVU3Hr1G061000.6 , HORVU3Hr1G061000.7 , HORVU3Hr1G061000.8 , HORVU3Hr1G071740.2 , HORVU3Hr1G071740.3 , HORVU5Hr1G114250.1 , HORVU5Hr1G114250.2 , HORVU3Hr1G071740.5 , HORVU1Hr1G001920.3 , HORVU1Hr1G001920.2 , HORVU3Hr1G085710.4 , HORVU3Hr1G085710.2 , HORVU3Hr1G085710.1
Wheat TraesCS7B02G273300 , TraesCS5D02G498600 , TraesCS1A02G015400 , TraesCS3B02G272300 , TraesCS3B02G396200 , TraesCS5A02G184100 , TraesCS3A02G289600 , TraesCS5D02G188900 , TraesCS7D02G368300 , TraesCS3D02G357500 , TraesCS3B02G324300 , TraesCS5B02G182200 , TraesCS4A02G343500 , TraesCS1D02G405900 , TraesCS5D02G529500 , TraesCS1A02G398400 , TraesCS1B02G426300 , TraesCS1B02G018900 , TraesCS3D02G289400 , TraesCS7A02G354400 , TraesCS3A02G364100 , TraesCS3A02G247000 , TraesCS1D02G013300 , TraesCS5B02G530800 , TraesCS5B02G498600 , TraesCS5A02G485100 , TraesCS3D02G244500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G179100 protein transport protein Sec61 subunit alpha isoform 1, putative, expressed K10956: protein transport protein SEC61 subunit alpha
2 Sobic.007G111901 - -
3 Sobic.004G075301 - -
4 Sobic.003G426750 - -
5 Sobic.008G153801 - -
6 Sobic.009G248700 C4-dicarboxylate transporter/malic acid transport protein, expressed -
7 Sobic.006G204850 - -
8 Sobic.007G007250 - -
9 Sobic.009G072066 - -
10 Sobic.001G236950 - -
11 Sobic.001G273600 expressed protein -
12 Sobic.009G092100 WRKY69, expressed -
13 Sobic.003G434500 expressed protein -
14 Sobic.005G167600 resistance protein, putative, expressed -
15 Sobic.009G062150 - -
16 Sobic.002G397001 - -
17 Sobic.005G017632 - -
18 Sobic.009G037400 cytokinin inducible protein, putative, expressed -
19 Sobic.010G140300 - -
20 Sobic.008G082450 - -


Gene co-expression network
sample Sobic009G079801 Sobic009G079801 Sobic004G179100 Sobic004G179100 Sobic009G079801--Sobic004G179100 Sobic007G111901 Sobic007G111901 Sobic009G079801--Sobic007G111901 Sobic004G075301 Sobic004G075301 Sobic009G079801--Sobic004G075301 Sobic003G426750 Sobic003G426750 Sobic009G079801--Sobic003G426750 Sobic008G153801 Sobic008G153801 Sobic009G079801--Sobic008G153801 Sobic009G248700 Sobic009G248700 Sobic009G079801--Sobic009G248700 Sobic006G204850 Sobic006G204850 Sobic009G079801--Sobic006G204850 Sobic007G007250 Sobic007G007250 Sobic009G079801--Sobic007G007250 Sobic009G072066 Sobic009G072066 Sobic009G079801--Sobic009G072066 Sobic004G179100--Sobic004G075301 Sobic004G179100--Sobic009G072066 Sobic002G397001 Sobic002G397001 Sobic004G179100--Sobic002G397001 Sobic001G273600 Sobic001G273600 Sobic004G179100--Sobic001G273600 Sobic004G179100--Sobic009G248700 Sobic007G146800 Sobic007G146800 Sobic004G179100--Sobic007G146800 Sobic003G434500 Sobic003G434500 Sobic004G179100--Sobic003G434500 Sobic006G089200 Sobic006G089200 Sobic004G179100--Sobic006G089200 Sobic001G018700 Sobic001G018700 Sobic004G179100--Sobic001G018700 Sobic007G111901--Sobic004G179100 Sobic007G111901--Sobic004G075301 Sobic007G111901--Sobic009G072066 Sobic007G111901--Sobic002G397001 Sobic004G123801 Sobic004G123801 Sobic007G111901--Sobic004G123801 Sobic010G180750 Sobic010G180750 Sobic007G111901--Sobic010G180750 Sobic009G219601 Sobic009G219601 Sobic007G111901--Sobic009G219601 Sobic002G218350 Sobic002G218350 Sobic007G111901--Sobic002G218350 Sobic010G158300 Sobic010G158300 Sobic007G111901--Sobic010G158300 Sobic004G075301--Sobic009G072066 Sobic004G075301--Sobic001G018700 Sobic003G426750--Sobic008G153801 Sobic003G426750--Sobic006G204850 Sobic009G062150 Sobic009G062150 Sobic003G426750--Sobic009G062150 Sobic005G017632 Sobic005G017632 Sobic003G426750--Sobic005G017632 Sobic002G400050 Sobic002G400050 Sobic003G426750--Sobic002G400050 Sobic001G196950 Sobic001G196950 Sobic003G426750--Sobic001G196950 Sobic004G098650 Sobic004G098650 Sobic003G426750--Sobic004G098650 Sobic003G426750--Sobic001G018700 Sobic008G153801--Sobic006G204850 Sobic008G153801--Sobic003G426750 Sobic008G153801--Sobic005G017632 Sobic008G153801--Sobic009G062150 Sobic008G153801--Sobic001G018700 Sobic009G248700--Sobic003G434500 Sobic009G248700--Sobic001G273600 Sobic005G167600 Sobic005G167600 Sobic009G248700--Sobic005G167600 Sobic009G037400 Sobic009G037400 Sobic009G248700--Sobic009G037400 Sobic009G248700--Sobic001G018700 Sobic006G204850--Sobic008G153801 Sobic006G204850--Sobic005G017632 Sobic006G204850--Sobic001G018700 Sobic005G207900 Sobic005G207900 Sobic007G007250--Sobic005G207900 Sobic003G090100 Sobic003G090100 Sobic007G007250--Sobic003G090100 Sobic007G007250--Sobic001G273600 Sobic007G007250--Sobic001G018700 Sobic009G072066--Sobic004G075301 Sobic009G072066--Sobic001G018700
Octagon: transcription factors


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