Gene annotation
Transcriptome id Sobic.009G115950.1
Synonym -
Functional annotation -
UniProt A0A1Z5R275
Pfam PF00628 PF12165
Panther DB PTHR12321 PTHR12321:SF39
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0006355regulation of transcription, DNA-templated


Orthologs (automatic annotation)
TAIR AT5G05610 : alfin-like 1
RAP-DB (Rice) LOC_Os03g60390.1 : PHD finger protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G461500 expressed protein -
2 Sobic.002G028300 MBTB48 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
3 Sobic.007G150500 expressed protein -
4 Sobic.002G027401 - -
5 Sobic.001G331401 - -
6 Sobic.006G003800 no apical meristem protein, putative, expressed -
7 Sobic.001G244000 MTN26L2 - MtN26 family protein precursor, expressed -
8 Sobic.004G230000 expressed protein -
9 Sobic.004G230000 expressed protein -
10 Sobic.004G230000 expressed protein -
11 Sobic.004G230000 expressed protein -
12 Sobic.004G230000 expressed protein -
13 Sobic.004G230000 expressed protein -
14 Sobic.004G230000 expressed protein -
15 Sobic.004G230000 expressed protein -
16 Sobic.003G344501 - -
17 Sobic.006G061500 ulp1 protease family protein, putative, expressed -
18 Sobic.004G187501 - -
19 Sobic.002G125400 - -
20 Sobic.003G069300 transferase family protein, putative, expressed -


Gene co-expression network
sample Sobic009G115950 Sobic009G115950 Sobic001G461500 Sobic001G461500 Sobic009G115950--Sobic001G461500 Sobic002G028300 Sobic002G028300 Sobic009G115950--Sobic002G028300 Sobic007G150500 Sobic007G150500 Sobic009G115950--Sobic007G150500 Sobic002G027401 Sobic002G027401 Sobic009G115950--Sobic002G027401 Sobic001G331401 Sobic001G331401 Sobic009G115950--Sobic001G331401 Sobic006G003800 Sobic006G003800 Sobic009G115950--Sobic006G003800 Sobic001G244000 Sobic001G244000 Sobic009G115950--Sobic001G244000 Sobic004G230000 Sobic004G230000 Sobic009G115950--Sobic004G230000 Sobic001G461500--Sobic002G027401 Sobic001G461500--Sobic002G028300 Sobic003G081200 Sobic003G081200 Sobic001G461500--Sobic003G081200 Sobic001G461500--Sobic001G331401 Sobic009G147450 Sobic009G147450 Sobic001G461500--Sobic009G147450 Sobic001G461500--Sobic009G115950 Sobic004G024350 Sobic004G024350 Sobic001G461500--Sobic004G024350 Sobic001G461500--Sobic004G230000 Sobic002G028300--Sobic002G027401 Sobic002G028300--Sobic004G230000 Sobic002G357950 Sobic002G357950 Sobic007G150500--Sobic002G357950 Sobic007G150500--Sobic009G115950 Sobic007G150500--Sobic006G003800 Sobic005G211801 Sobic005G211801 Sobic007G150500--Sobic005G211801 Sobic005G198400 Sobic005G198400 Sobic007G150500--Sobic005G198400 Sobic005G110466 Sobic005G110466 Sobic007G150500--Sobic005G110466 Sobic005G150300 Sobic005G150300 Sobic007G150500--Sobic005G150300 Sobic001G221350 Sobic001G221350 Sobic007G150500--Sobic001G221350 Sobic003G325800 Sobic003G325800 Sobic007G150500--Sobic003G325800 Sobic002G027401--Sobic004G230000 Sobic003G344501 Sobic003G344501 Sobic002G027401--Sobic003G344501 Sobic004G187501 Sobic004G187501 Sobic001G331401--Sobic004G187501 Sobic001G331401--Sobic004G024350 Sobic002G310400 Sobic002G310400 Sobic001G331401--Sobic002G310400 Sobic001G331401--Sobic002G028300 Sobic001G331401--Sobic009G147450 Sobic001G331401--Sobic004G230000 Sobic006G003800--Sobic007G150500 Sobic009G103300 Sobic009G103300 Sobic006G003800--Sobic009G103300 Sobic006G003800--Sobic009G115950 Sobic006G003800--Sobic005G211801 Sobic010G029800 Sobic010G029800 Sobic006G003800--Sobic010G029800 Sobic005G042400 Sobic005G042400 Sobic006G003800--Sobic005G042400 Sobic004G008700 Sobic004G008700 Sobic006G003800--Sobic004G008700 Sobic008G069000 Sobic008G069000 Sobic006G003800--Sobic008G069000 Sobic006G003800--Sobic005G198400 Sobic001G244000--Sobic004G230000 Sobic001G244000--Sobic003G344501 Sobic004G230000--Sobic004G230000 Sobic004G230000--Sobic003G344501 Sobic006G061500 Sobic006G061500 Sobic004G230000--Sobic006G061500
Octagon: transcription factors


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