Gene annotation
Transcriptome id Sobic.009G218450.1
Synonym -
Functional annotation -
UniProt A0A1Z5R3M3
Pfam PF00005 PF00664
Panther DB PTHR24221 PTHR24221:SF220
NCBI CDD -
KEGG Orthology K05658; ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
Gene Ontology GO:0016887; ATPase activity GO:0005524ATP binding GO:0016021integral component of membrane GO:0006810transport


Orthologs (automatic annotation)
TAIR AT1G02520 : P-glycoprotein 11
RAP-DB (Rice) LOC_Os01g50160.1 : MDR-like ABC transporter, putative, expressed
MaizeGDB (Corn) Zm00025a036501 , Zm00025a036502 , Zm00025a027910 , Zm00025a032376
Brachypodium PNT70780 , PNT70778 , PNT70777 , PNT70779 , KQK07666 , KQK05061 , KQK09335 , PNT72653 , PNT72654
Barley HORVU2Hr1G115180.1 , HORVU2Hr1G115180.2 , HORVU2Hr1G115180.3 , HORVU2Hr1G115180.4 , HORVU2Hr1G115180.5 , HORVU2Hr1G115180.7 , HORVU1Hr1G078450.6 , HORVU1Hr1G078450.22 , HORVU1Hr1G078450.23 , HORVU1Hr1G078450.20 , HORVU1Hr1G078450.24 , HORVU1Hr1G078450.17 , HORVU1Hr1G078450.16 , HORVU1Hr1G078450.19 , HORVU1Hr1G078450.18 , HORVU1Hr1G078450.21
Wheat TraesCS2D02G523100 , TraesCS2D02G523100 , TraesCS2A02G521400 , TraesCS2A02G521400 , TraesCS2A02G521400 , TraesCS1A02G368500 , TraesCS1B02G387400 , TraesCS3D02G362700 , TraesCS3A02G369700 , TraesCS3A02G369700 , TraesCS1D02G374300
Populus PNT04248 , PNT50448


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G195866 - -
2 Sobic.008G064200 - -
3 Sobic.003G210500 leucine rich repeat protein, putative, expressed -
4 Sobic.006G027800 disease resistance RPP13-like protein 1, putative, expressed -
5 Sobic.009G180900 disease resistance RPP13-like protein 1, putative, expressed -
6 Sobic.007G149950 - -
7 Sobic.007G175000 carrier, putative, expressed -
8 Sobic.001G187900 disease resistance protein, putative, expressed -
9 Sobic.005G150700 resistance protein, putative, expressed -
10 Sobic.010G175100 S-locus-like receptor protein kinase, putative, expressed -
11 Sobic.004G347833 - -
12 Sobic.004G203633 - -
13 Sobic.003G177350 - -
14 Sobic.001G221700 NB-ARC domain containing protein, expressed -
15 Sobic.006G075200 Aluminium activated malate transporter("PubMedID : 26759170,PubMedID : 24597475")@aluminum-activated malate transporter, putative, expressed -
16 Sobic.001G074601 - -
17 Sobic.002G219100 - -
18 Sobic.006G117800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@receptor-like protein kinase, putative, expressed -
19 Sobic.010G274700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@receptor kinase, putative, expressed -
20 Sobic.002G365300 NBS-LRR type disease resistance protein, putative, expressed -


Gene co-expression network
sample Sobic009G218450 Sobic009G218450 Sobic001G195866 Sobic001G195866 Sobic009G218450--Sobic001G195866 Sobic008G064200 Sobic008G064200 Sobic009G218450--Sobic008G064200 Sobic003G210500 Sobic003G210500 Sobic009G218450--Sobic003G210500 Sobic006G027800 Sobic006G027800 Sobic009G218450--Sobic006G027800 Sobic009G180900 Sobic009G180900 Sobic009G218450--Sobic009G180900 Sobic007G149950 Sobic007G149950 Sobic009G218450--Sobic007G149950 Sobic007G175000 Sobic007G175000 Sobic009G218450--Sobic007G175000 Sobic001G187900 Sobic001G187900 Sobic009G218450--Sobic001G187900 Sobic005G150700 Sobic005G150700 Sobic009G218450--Sobic005G150700 Sobic001G195866--Sobic009G218450 Sobic010G135700 Sobic010G135700 Sobic001G195866--Sobic010G135700 Sobic001G221700 Sobic001G221700 Sobic001G195866--Sobic001G221700 Sobic003G348300 Sobic003G348300 Sobic001G195866--Sobic003G348300 Sobic002G221000 Sobic002G221000 Sobic001G195866--Sobic002G221000 Sobic002G262250 Sobic002G262250 Sobic001G195866--Sobic002G262250 Sobic008G154500 Sobic008G154500 Sobic001G195866--Sobic008G154500 Sobic003G217566 Sobic003G217566 Sobic001G195866--Sobic003G217566 Sobic001G486400 Sobic001G486400 Sobic001G195866--Sobic001G486400 Sobic008G064200--Sobic009G218450 Sobic004G347833 Sobic004G347833 Sobic008G064200--Sobic004G347833 Sobic005G083400 Sobic005G083400 Sobic008G064200--Sobic005G083400 Sobic008G064200--Sobic006G027800 Sobic006G075200 Sobic006G075200 Sobic008G064200--Sobic006G075200 Sobic008G064200--Sobic009G180900 Sobic001G074601 Sobic001G074601 Sobic008G064200--Sobic001G074601 Sobic008G064200--Sobic007G149950 Sobic008G064200--Sobic001G195866 Sobic003G210500--Sobic007G175000 Sobic003G210500--Sobic005G150700 Sobic003G210500--Sobic009G218450 Sobic007G175100 Sobic007G175100 Sobic003G210500--Sobic007G175100 Sobic006G117800 Sobic006G117800 Sobic003G210500--Sobic006G117800 Sobic002G219100 Sobic002G219100 Sobic003G210500--Sobic002G219100 Sobic003G210500--Sobic001G221700 Sobic009G037500 Sobic009G037500 Sobic003G210500--Sobic009G037500 Sobic002G219600 Sobic002G219600 Sobic003G210500--Sobic002G219600 Sobic006G027800--Sobic009G180900 Sobic006G027800--Sobic009G218450 Sobic010G175100 Sobic010G175100 Sobic006G027800--Sobic010G175100 Sobic006G027800--Sobic008G064200 Sobic006G027800--Sobic005G083400 Sobic010G201444 Sobic010G201444 Sobic006G027800--Sobic010G201444 Sobic001G005100 Sobic001G005100 Sobic006G027800--Sobic001G005100 Sobic007G174000 Sobic007G174000 Sobic006G027800--Sobic007G174000 Sobic004G221100 Sobic004G221100 Sobic006G027800--Sobic004G221100 Sobic004G074400 Sobic004G074400 Sobic009G180900--Sobic004G074400 Sobic009G180900--Sobic006G027800 Sobic009G180900--Sobic004G347833 Sobic008G147600 Sobic008G147600 Sobic009G180900--Sobic008G147600 Sobic004G279400 Sobic004G279400 Sobic009G180900--Sobic004G279400 Sobic009G180900--Sobic002G219100 Sobic009G180900--Sobic005G150700 Sobic009G180900--Sobic009G218450 Sobic009G180900--Sobic010G175100 Sobic007G149950--Sobic007G175100 Sobic007G149950--Sobic007G175000 Sobic003G057000 Sobic003G057000 Sobic007G149950--Sobic003G057000 Sobic007G149950--Sobic006G117800 Sobic007G149950--Sobic001G187900 Sobic007G149950--Sobic001G074601 Sobic007G149950--Sobic009G218450 Sobic002G086900 Sobic002G086900 Sobic007G149950--Sobic002G086900 Sobic007G038100 Sobic007G038100 Sobic007G149950--Sobic007G038100 Sobic007G175000--Sobic007G175100 Sobic007G175000--Sobic003G210500 Sobic007G175000--Sobic007G038100 Sobic001G174200 Sobic001G174200 Sobic007G175000--Sobic001G174200 Sobic002G375500 Sobic002G375500 Sobic007G175000--Sobic002G375500 Sobic007G175000--Sobic009G037500 Sobic001G145550 Sobic001G145550 Sobic007G175000--Sobic001G145550 Sobic007G175000--Sobic007G149950 Sobic007G175000--Sobic005G150700 Sobic001G187900--Sobic002G086900 Sobic007G149500 Sobic007G149500 Sobic001G187900--Sobic007G149500 Sobic002G208700 Sobic002G208700 Sobic001G187900--Sobic002G208700 Sobic007G137100 Sobic007G137100 Sobic001G187900--Sobic007G137100 Sobic006G215650 Sobic006G215650 Sobic001G187900--Sobic006G215650 Sobic010G042300 Sobic010G042300 Sobic001G187900--Sobic010G042300 Sobic002G046150 Sobic002G046150 Sobic001G187900--Sobic002G046150 Sobic006G165501 Sobic006G165501 Sobic001G187900--Sobic006G165501 Sobic003G329300 Sobic003G329300 Sobic001G187900--Sobic003G329300 Sobic005G150700--Sobic002G219100 Sobic005G150700--Sobic009G037500 Sobic010G025600 Sobic010G025600 Sobic005G150700--Sobic010G025600 Sobic005G150700--Sobic003G210500 Sobic001G279800 Sobic001G279800 Sobic005G150700--Sobic001G279800 Sobic003G012750 Sobic003G012750 Sobic005G150700--Sobic003G012750 Sobic005G150700--Sobic007G175000 Sobic008G053500 Sobic008G053500 Sobic005G150700--Sobic008G053500 Sobic003G068200 Sobic003G068200 Sobic005G150700--Sobic003G068200
Octagon: transcription factors


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