Gene annotation
Transcriptome id Sobic.006G117800.1
Synonym Sb06g019890, RLK1
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence (PubMedID : 27586543)
receptor-like protein kinase, putative, expressed
UniProt A0A1Z5RDF3
Pfam PF01453 PF00069
Panther DB PTHR27002 PTHR27002:SF54
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT5G60900 : receptor-like protein kinase 1
RAP-DB (Rice) LOC_Os04g12540.1 : receptor-like protein kinase, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G074601 - -
2 Sobic.002G219600 RIO1 family protein, expressed K08818: cell division cycle 2-like
3 Sobic.003G251000 S-locus-like receptor protein kinase, putative, expressed -
4 Sobic.006G145300 Os4bglu14 - monolignol beta-glucoside homologue without catalytic acid/base, expressed -
5 Sobic.001G145550 - -
6 Sobic.003G210500 leucine rich repeat protein, putative, expressed -
7 Sobic.010G174000 1-aminocyclopropane-1-carboxylate oxidase protein, putative, expressed K05933: aminocyclopropanecarboxylate oxidase
8 Sobic.002G163400 - -
9 Sobic.008G056000 nifU, putative, expressed -
10 Sobic.007G175100 carrier, putative, expressed -
11 Sobic.006G094900 DUF567 domain containing protein, putative, expressed -
12 Sobic.007G175000 carrier, putative, expressed -
13 Sobic.009G037500 expressed protein -
14 Sobic.002G375500 protein kinase domain containing protein, expressed -
15 Sobic.001G440401 - -
16 Sobic.007G179266 - -
17 Sobic.007G149950 - -
18 Sobic.008G060800 expressed protein -
19 Sobic.005G109101 - -
20 Sobic.010G274700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@receptor kinase, putative, expressed -


Gene co-expression network
sample Sobic006G117800 Sobic006G117800 Sobic001G074601 Sobic001G074601 Sobic006G117800--Sobic001G074601 Sobic002G219600 Sobic002G219600 Sobic006G117800--Sobic002G219600 Sobic003G251000 Sobic003G251000 Sobic006G117800--Sobic003G251000 Sobic006G145300 Sobic006G145300 Sobic006G117800--Sobic006G145300 Sobic001G145550 Sobic001G145550 Sobic006G117800--Sobic001G145550 Sobic003G210500 Sobic003G210500 Sobic006G117800--Sobic003G210500 Sobic010G174000 Sobic010G174000 Sobic006G117800--Sobic010G174000 Sobic002G163400 Sobic002G163400 Sobic006G117800--Sobic002G163400 Sobic008G056000 Sobic008G056000 Sobic006G117800--Sobic008G056000 Sobic001G074601--Sobic006G117800 Sobic007G149500 Sobic007G149500 Sobic001G074601--Sobic007G149500 Sobic001G524750 Sobic001G524750 Sobic001G074601--Sobic001G524750 Sobic002G086900 Sobic002G086900 Sobic001G074601--Sobic002G086900 Sobic001G074601--Sobic006G145300 Sobic007G133733 Sobic007G133733 Sobic001G074601--Sobic007G133733 Sobic001G187900 Sobic001G187900 Sobic001G074601--Sobic001G187900 Sobic001G162600 Sobic001G162600 Sobic001G074601--Sobic001G162600 Sobic007G149950 Sobic007G149950 Sobic001G074601--Sobic007G149950 Sobic002G219600--Sobic006G117800 Sobic002G025900 Sobic002G025900 Sobic002G219600--Sobic002G025900 Sobic010G045966 Sobic010G045966 Sobic002G219600--Sobic010G045966 Sobic007G134700 Sobic007G134700 Sobic002G219600--Sobic007G134700 Sobic003G254850 Sobic003G254850 Sobic002G219600--Sobic003G254850 Sobic001G440401 Sobic001G440401 Sobic002G219600--Sobic001G440401 Sobic007G179266 Sobic007G179266 Sobic002G219600--Sobic007G179266 Sobic002G219600--Sobic008G056000 Sobic005G150700 Sobic005G150700 Sobic002G219600--Sobic005G150700 Sobic006G149900 Sobic006G149900 Sobic003G251000--Sobic006G149900 Sobic002G154450 Sobic002G154450 Sobic003G251000--Sobic002G154450 Sobic010G052100 Sobic010G052100 Sobic003G251000--Sobic010G052100 Sobic009G094100 Sobic009G094100 Sobic003G251000--Sobic009G094100 Sobic004G127350 Sobic004G127350 Sobic003G251000--Sobic004G127350 Sobic005G176300 Sobic005G176300 Sobic003G251000--Sobic005G176300 Sobic006G037800 Sobic006G037800 Sobic003G251000--Sobic006G037800 Sobic004G072600 Sobic004G072600 Sobic003G251000--Sobic004G072600 Sobic007G103200 Sobic007G103200 Sobic003G251000--Sobic007G103200 Sobic004G209100 Sobic004G209100 Sobic006G145300--Sobic004G209100 Sobic006G223101 Sobic006G223101 Sobic006G145300--Sobic006G223101 Sobic008G115200 Sobic008G115200 Sobic006G145300--Sobic008G115200 Sobic005G090800 Sobic005G090800 Sobic006G145300--Sobic005G090800 Sobic006G145300--Sobic003G251000 Sobic010G235100 Sobic010G235100 Sobic006G145300--Sobic010G235100 Sobic007G004400 Sobic007G004400 Sobic006G145300--Sobic007G004400 Sobic010G136700 Sobic010G136700 Sobic006G145300--Sobic010G136700 Sobic003G232600 Sobic003G232600 Sobic006G145300--Sobic003G232600 Sobic009G037500 Sobic009G037500 Sobic001G145550--Sobic009G037500 Sobic001G422001 Sobic001G422001 Sobic001G145550--Sobic001G422001 Sobic009G213150 Sobic009G213150 Sobic001G145550--Sobic009G213150 Sobic001G145550--Sobic007G149500 Sobic006G094900 Sobic006G094900 Sobic001G145550--Sobic006G094900 Sobic002G094000 Sobic002G094000 Sobic001G145550--Sobic002G094000 Sobic004G278800 Sobic004G278800 Sobic001G145550--Sobic004G278800 Sobic003G142500 Sobic003G142500 Sobic001G145550--Sobic003G142500 Sobic002G375500 Sobic002G375500 Sobic001G145550--Sobic002G375500 Sobic007G175000 Sobic007G175000 Sobic003G210500--Sobic007G175000 Sobic003G210500--Sobic005G150700 Sobic009G218450 Sobic009G218450 Sobic003G210500--Sobic009G218450 Sobic007G175100 Sobic007G175100 Sobic003G210500--Sobic007G175100 Sobic003G210500--Sobic006G117800 Sobic002G219100 Sobic002G219100 Sobic003G210500--Sobic002G219100 Sobic001G221700 Sobic001G221700 Sobic003G210500--Sobic001G221700 Sobic003G210500--Sobic009G037500 Sobic003G210500--Sobic002G219600 Sobic010G174000--Sobic008G056000 Sobic010G174000--Sobic002G163400 Sobic010G174000--Sobic003G251000 Sobic009G030501 Sobic009G030501 Sobic010G174000--Sobic009G030501 Sobic010G174000--Sobic006G149900 Sobic010G174000--Sobic004G072600 Sobic010G174000--Sobic001G440401 Sobic010G011100 Sobic010G011100 Sobic010G174000--Sobic010G011100 Sobic006G223601 Sobic006G223601 Sobic010G174000--Sobic006G223601 Sobic002G163400--Sobic004G072600 Sobic002G149600 Sobic002G149600 Sobic002G163400--Sobic002G149600 Sobic002G074700 Sobic002G074700 Sobic002G163400--Sobic002G074700 Sobic002G163400--Sobic009G094100 Sobic003G263450 Sobic003G263450 Sobic002G163400--Sobic003G263450 Sobic002G163400--Sobic003G251000 Sobic001G154450 Sobic001G154450 Sobic002G163400--Sobic001G154450 Sobic002G163500 Sobic002G163500 Sobic002G163400--Sobic002G163500 Sobic002G163400--Sobic010G174000 Sobic008G056000--Sobic001G440401 Sobic008G056000--Sobic007G134700 Sobic010G149000 Sobic010G149000 Sobic008G056000--Sobic010G149000 Sobic003G288700 Sobic003G288700 Sobic008G056000--Sobic003G288700 Sobic008G056000--Sobic002G025900 Sobic008G056000--Sobic003G251000 Sobic002G168750 Sobic002G168750 Sobic008G056000--Sobic002G168750 Sobic006G065000 Sobic006G065000 Sobic008G056000--Sobic006G065000 Sobic008G056000--Sobic006G037800
Octagon: transcription factors


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