Gene annotation
Transcriptome id Sobic.003G210500.1
Synonym Sb03g027070
Functional annotation leucine rich repeat protein, putative, expressed
UniProt C5XQ87
Pfam PF08263 PF00560 PF13855
Panther DB PTHR27004 PTHR27004:SF14
NCBI CDD KOG0472; Leucine-rich repeat protein
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT2G34930 : disease resistance family protein / LRR family protein
RAP-DB (Rice) LOC_Os01g41770.1 : leucine rich repeat protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU7Hr1G006610.3 , HORVU7Hr1G006610.1 , HORVU4Hr1G001040.7 , HORVU4Hr1G001040.6
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G175000 carrier, putative, expressed -
2 Sobic.005G150700 resistance protein, putative, expressed -
3 Sobic.009G218450 - K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
4 Sobic.007G175100 carrier, putative, expressed -
5 Sobic.006G117800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@receptor-like protein kinase, putative, expressed -
6 Sobic.002G219100 - -
7 Sobic.001G221700 NB-ARC domain containing protein, expressed -
8 Sobic.009G037500 expressed protein -
9 Sobic.002G219600 RIO1 family protein, expressed K08818: cell division cycle 2-like
10 Sobic.006G054200 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@multidrug resistance-associated protein 9("PubMedID : 26759170,PubMedID : 24597475")@multidrug resistance-associated protein, putative, expressed -
11 Sobic.001G145550 - -
12 Sobic.007G149500 expressed protein -
13 Sobic.001G174200 GRAS family transcription factor containing protein, expressed -
14 Sobic.010G274700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@receptor kinase, putative, expressed -
15 Sobic.001G187900 disease resistance protein, putative, expressed -
16 Sobic.002G375500 protein kinase domain containing protein, expressed -
17 Sobic.008G056000 nifU, putative, expressed -
18 Sobic.010G174000 1-aminocyclopropane-1-carboxylate oxidase protein, putative, expressed K05933: aminocyclopropanecarboxylate oxidase
19 Sobic.008G060800 expressed protein -
20 Sobic.002G262250 - -


Gene co-expression network
sample Sobic003G210500 Sobic003G210500 Sobic007G175000 Sobic007G175000 Sobic003G210500--Sobic007G175000 Sobic005G150700 Sobic005G150700 Sobic003G210500--Sobic005G150700 Sobic009G218450 Sobic009G218450 Sobic003G210500--Sobic009G218450 Sobic007G175100 Sobic007G175100 Sobic003G210500--Sobic007G175100 Sobic006G117800 Sobic006G117800 Sobic003G210500--Sobic006G117800 Sobic002G219100 Sobic002G219100 Sobic003G210500--Sobic002G219100 Sobic001G221700 Sobic001G221700 Sobic003G210500--Sobic001G221700 Sobic009G037500 Sobic009G037500 Sobic003G210500--Sobic009G037500 Sobic002G219600 Sobic002G219600 Sobic003G210500--Sobic002G219600 Sobic007G175000--Sobic007G175100 Sobic007G175000--Sobic003G210500 Sobic007G038100 Sobic007G038100 Sobic007G175000--Sobic007G038100 Sobic001G174200 Sobic001G174200 Sobic007G175000--Sobic001G174200 Sobic002G375500 Sobic002G375500 Sobic007G175000--Sobic002G375500 Sobic007G175000--Sobic009G037500 Sobic001G145550 Sobic001G145550 Sobic007G175000--Sobic001G145550 Sobic007G149950 Sobic007G149950 Sobic007G175000--Sobic007G149950 Sobic007G175000--Sobic005G150700 Sobic005G150700--Sobic002G219100 Sobic005G150700--Sobic009G037500 Sobic010G025600 Sobic010G025600 Sobic005G150700--Sobic010G025600 Sobic005G150700--Sobic003G210500 Sobic001G279800 Sobic001G279800 Sobic005G150700--Sobic001G279800 Sobic003G012750 Sobic003G012750 Sobic005G150700--Sobic003G012750 Sobic005G150700--Sobic007G175000 Sobic008G053500 Sobic008G053500 Sobic005G150700--Sobic008G053500 Sobic003G068200 Sobic003G068200 Sobic005G150700--Sobic003G068200 Sobic001G195866 Sobic001G195866 Sobic009G218450--Sobic001G195866 Sobic008G064200 Sobic008G064200 Sobic009G218450--Sobic008G064200 Sobic009G218450--Sobic003G210500 Sobic006G027800 Sobic006G027800 Sobic009G218450--Sobic006G027800 Sobic009G180900 Sobic009G180900 Sobic009G218450--Sobic009G180900 Sobic009G218450--Sobic007G149950 Sobic009G218450--Sobic007G175000 Sobic001G187900 Sobic001G187900 Sobic009G218450--Sobic001G187900 Sobic009G218450--Sobic005G150700 Sobic007G175100--Sobic002G375500 Sobic007G175100--Sobic007G175000 Sobic007G175100--Sobic007G038100 Sobic007G175100--Sobic001G174200 Sobic010G274700 Sobic010G274700 Sobic007G175100--Sobic010G274700 Sobic003G057000 Sobic003G057000 Sobic007G175100--Sobic003G057000 Sobic001G174100 Sobic001G174100 Sobic007G175100--Sobic001G174100 Sobic007G175100--Sobic001G145550 Sobic001G422001 Sobic001G422001 Sobic007G175100--Sobic001G422001 Sobic001G074601 Sobic001G074601 Sobic006G117800--Sobic001G074601 Sobic006G117800--Sobic002G219600 Sobic003G251000 Sobic003G251000 Sobic006G117800--Sobic003G251000 Sobic006G145300 Sobic006G145300 Sobic006G117800--Sobic006G145300 Sobic006G117800--Sobic001G145550 Sobic006G117800--Sobic003G210500 Sobic010G174000 Sobic010G174000 Sobic006G117800--Sobic010G174000 Sobic002G163400 Sobic002G163400 Sobic006G117800--Sobic002G163400 Sobic008G056000 Sobic008G056000 Sobic006G117800--Sobic008G056000 Sobic002G219100--Sobic005G150700 Sobic002G219100--Sobic001G279800 Sobic002G219100--Sobic009G037500 Sobic002G219100--Sobic010G025600 Sobic008G147600 Sobic008G147600 Sobic002G219100--Sobic008G147600 Sobic002G219100--Sobic003G210500 Sobic002G219100--Sobic003G012750 Sobic001G144100 Sobic001G144100 Sobic002G219100--Sobic001G144100 Sobic002G219100--Sobic009G180900 Sobic008G060800 Sobic008G060800 Sobic001G221700--Sobic008G060800 Sobic001G221700--Sobic001G195866 Sobic002G262250 Sobic002G262250 Sobic001G221700--Sobic002G262250 Sobic003G348300 Sobic003G348300 Sobic001G221700--Sobic003G348300 Sobic001G221700--Sobic003G210500 Sobic008G187450 Sobic008G187450 Sobic001G221700--Sobic008G187450 Sobic002G290900 Sobic002G290900 Sobic001G221700--Sobic002G290900 Sobic001G486400 Sobic001G486400 Sobic001G221700--Sobic001G486400 Sobic004G092950 Sobic004G092950 Sobic001G221700--Sobic004G092950 Sobic009G037500--Sobic001G145550 Sobic009G037500--Sobic001G422001 Sobic009G037500--Sobic005G150700 Sobic009G020600 Sobic009G020600 Sobic009G037500--Sobic009G020600 Sobic007G149500 Sobic007G149500 Sobic009G037500--Sobic007G149500 Sobic009G037500--Sobic001G279800 Sobic009G037500--Sobic002G219100 Sobic006G094900 Sobic006G094900 Sobic009G037500--Sobic006G094900 Sobic009G037500--Sobic007G175000 Sobic002G219600--Sobic006G117800 Sobic002G025900 Sobic002G025900 Sobic002G219600--Sobic002G025900 Sobic010G045966 Sobic010G045966 Sobic002G219600--Sobic010G045966 Sobic007G134700 Sobic007G134700 Sobic002G219600--Sobic007G134700 Sobic003G254850 Sobic003G254850 Sobic002G219600--Sobic003G254850 Sobic001G440401 Sobic001G440401 Sobic002G219600--Sobic001G440401 Sobic007G179266 Sobic007G179266 Sobic002G219600--Sobic007G179266 Sobic002G219600--Sobic008G056000 Sobic002G219600--Sobic005G150700
Octagon: transcription factors


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