Gene annotation
Transcriptome id Sobic.010G157100.1
Synonym Sb10g020980
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
zinc finger, C3HC4 type domain containing protein, expressed
UniProt A0A1W0VTC0
Pfam PF13639
Panther DB PTHR14155 PTHR14155:SF146
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008270; zinc ion binding GO:0005515protein binding


Orthologs (automatic annotation)
TAIR AT2G35000 : RING/U-box superfamily protein
RAP-DB (Rice) LOC_Os06g34400.1 : zinc finger, C3HC4 type domain containing protein, expressed
MaizeGDB (Corn) Zm00025a050945
Brachypodium PNT75842 , PNT71338
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G305400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytokinin-O-glucosyltransferase 2, putative, expressed -
2 Sobic.009G087900 transmembrane amino acid transporter protein, putative, expressed -
3 Sobic.003G206100 THION27 - Plant thionin family protein precursor, expressed -
4 Sobic.006G251301 - -
5 Sobic.002G334400 CSLF3 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed -
6 Sobic.001G153800 Os10bglu34 - beta-glucosidase homologue, similar to Os3bglu6, expressed K01188: beta-glucosidase
7 Sobic.008G189800 CHCH domain containing protein, expressed -
8 Sobic.001G359100 cytochrome P450, putative, expressed -
9 Sobic.003G070200 THION18 - Plant thionin family protein precursor, expressed -
10 Sobic.003G162500 expressed protein -
11 Sobic.006G059400 - -
12 Sobic.010G005900 nodulin, putative, expressed -
13 Sobic.004G090700 - -
14 Sobic.003G206200 THION27 - Plant thionin family protein precursor, expressed -
15 Sobic.004G159200 LEML2 - Anther-specific LEM1 family protein precursor, expressed -
16 Sobic.003G413400 LEML1 - Anther-specific LEM1 family protein precursor, expressed -
17 Sobic.008G138300 expressed protein -
18 Sobic.002G129600 LTPL62 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -
19 Sobic.007G073300 OsSCP38 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
20 Sobic.003G062900 OsSCP1 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II


Gene co-expression network
sample Sobic010G157100 Sobic010G157100 Sobic002G305400 Sobic002G305400 Sobic010G157100--Sobic002G305400 Sobic009G087900 Sobic009G087900 Sobic010G157100--Sobic009G087900 Sobic003G206100 Sobic003G206100 Sobic010G157100--Sobic003G206100 Sobic006G251301 Sobic006G251301 Sobic010G157100--Sobic006G251301 Sobic002G334400 Sobic002G334400 Sobic010G157100--Sobic002G334400 Sobic001G153800 Sobic001G153800 Sobic010G157100--Sobic001G153800 Sobic008G189800 Sobic008G189800 Sobic010G157100--Sobic008G189800 Sobic001G359100 Sobic001G359100 Sobic010G157100--Sobic001G359100 Sobic003G070200 Sobic003G070200 Sobic010G157100--Sobic003G070200 Sobic002G305400--Sobic009G087900 Sobic002G305400--Sobic002G334400 Sobic002G305400--Sobic001G153800 Sobic002G305400--Sobic001G359100 Sobic002G305400--Sobic003G070200 Sobic006G059400 Sobic006G059400 Sobic002G305400--Sobic006G059400 Sobic010G005900 Sobic010G005900 Sobic002G305400--Sobic010G005900 Sobic002G305400--Sobic003G206100 Sobic002G305400--Sobic006G251301 Sobic009G087900--Sobic002G305400 Sobic009G087900--Sobic002G334400 Sobic009G087900--Sobic001G153800 Sobic009G087900--Sobic001G359100 Sobic009G087900--Sobic003G070200 Sobic009G087900--Sobic006G059400 Sobic009G087900--Sobic010G005900 Sobic009G087900--Sobic003G206100 Sobic002G260100 Sobic002G260100 Sobic009G087900--Sobic002G260100 Sobic003G206100--Sobic006G251301 Sobic003G206100--Sobic008G189800 Sobic003G162500 Sobic003G162500 Sobic003G206100--Sobic003G162500 Sobic004G090700 Sobic004G090700 Sobic003G206100--Sobic004G090700 Sobic003G206200 Sobic003G206200 Sobic003G206100--Sobic003G206200 Sobic004G159200 Sobic004G159200 Sobic003G206100--Sobic004G159200 Sobic003G413400 Sobic003G413400 Sobic003G206100--Sobic003G413400 Sobic008G138300 Sobic008G138300 Sobic003G206100--Sobic008G138300 Sobic002G129600 Sobic002G129600 Sobic003G206100--Sobic002G129600 Sobic006G251301--Sobic003G206100 Sobic006G251301--Sobic008G189800 Sobic006G251301--Sobic003G162500 Sobic006G251301--Sobic004G090700 Sobic006G251301--Sobic003G206200 Sobic006G251301--Sobic004G159200 Sobic006G251301--Sobic003G413400 Sobic007G073300 Sobic007G073300 Sobic006G251301--Sobic007G073300 Sobic006G251301--Sobic002G129600 Sobic002G334400--Sobic001G153800 Sobic002G334400--Sobic001G359100 Sobic002G334400--Sobic003G070200 Sobic002G334400--Sobic006G059400 Sobic002G334400--Sobic009G087900 Sobic002G334400--Sobic002G305400 Sobic002G334400--Sobic002G260100 Sobic003G062900 Sobic003G062900 Sobic002G334400--Sobic003G062900 Sobic002G334400--Sobic010G005900 Sobic001G153800--Sobic002G334400 Sobic001G153800--Sobic001G359100 Sobic001G153800--Sobic003G070200 Sobic001G153800--Sobic006G059400 Sobic001G153800--Sobic009G087900 Sobic001G153800--Sobic002G305400 Sobic001G153800--Sobic002G260100 Sobic001G153800--Sobic003G062900 Sobic001G153800--Sobic010G005900 Sobic008G189800--Sobic006G251301 Sobic008G189800--Sobic003G162500 Sobic008G189800--Sobic003G206100 Sobic008G189800--Sobic004G090700 Sobic008G189800--Sobic003G206200 Sobic008G189800--Sobic004G159200 Sobic008G189800--Sobic003G413400 Sobic003G205700 Sobic003G205700 Sobic008G189800--Sobic003G205700 Sobic008G189800--Sobic002G129600 Sobic001G359100--Sobic003G070200 Sobic001G359100--Sobic006G059400 Sobic001G359100--Sobic001G153800 Sobic001G359100--Sobic002G334400 Sobic001G359100--Sobic009G087900 Sobic001G359100--Sobic002G305400 Sobic001G359100--Sobic002G260100 Sobic001G359100--Sobic003G062900 Sobic001G359100--Sobic010G005900 Sobic003G070200--Sobic001G359100 Sobic003G070200--Sobic006G059400 Sobic003G070200--Sobic001G153800 Sobic003G070200--Sobic002G334400 Sobic003G070200--Sobic009G087900 Sobic003G070200--Sobic002G305400 Sobic003G070200--Sobic002G260100 Sobic003G070200--Sobic003G062900 Sobic003G070200--Sobic010G005900
Octagon: transcription factors


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