Gene annotation
| Transcriptome id | Sobic.001G142900.1 |
|---|---|
| Synonym | ZIP10, Sb01g012440 |
| Functional annotation | metal cation transporter, putative, expressed |
| UniProt | C5WQB2 |
| Pfam | PF02535 |
| Panther DB | PTHR11040 PTHR11040:SF78 |
| NCBI CDD | KOG1558; Fe2+/Zn2+ regulated transporter |
| KEGG Orthology | K14709; SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3 |
| Gene Ontology | GO:0016020; membrane |
Orthologs (automatic annotation)
| TAIR | AT1G31260 : zinc transporter 10 precursor |
|---|---|
| RAP-DB (Rice) | LOC_Os03g46470.1 : metal cation transporter, putative, expressed |
| MaizeGDB (Corn) | Zm00025a009177 , Zm00025a007526 |
| Brachypodium | KQK13846 , KQK20303 |
| Barley | HORVU6Hr1G073380.1 , HORVU5Hr1G122110.1 , HORVU4Hr1G003050.1 , HORVU4Hr1G003050.2 , HORVU4Hr1G003050.3 , HORVU4Hr1G003050.4 , HORVU4Hr1G003050.5 |
| Wheat | TraesCS7D02G098100 , TraesCS4A02G294200 , TraesCS4D02G017600 , TraesCS4A02G294300 , TraesCS4A02G403300 , TraesCS4B02G019300 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.009G076300 | expressed protein | - |
| 2 | Sobic.003G204300 | expressed protein | - |
| 3 | Sobic.002G009100 | expressed protein | - |
| 4 | Sobic.002G009100 | expressed protein | - |
| 5 | Sobic.002G009100 | expressed protein | - |
| 6 | Sobic.002G009100 | expressed protein | - |
| 7 | Sobic.002G009100 | expressed protein | - |
| 8 | Sobic.002G009100 | expressed protein | - |
| 9 | Sobic.002G009100 | expressed protein | - |
| 10 | Sobic.002G009100 | expressed protein | - |
| 11 | Sobic.002G009100 | expressed protein | - |
| 12 | Sobic.002G009100 | expressed protein | - |
| 13 | Sobic.002G009100 | expressed protein | - |
| 14 | Sobic.002G009100 | expressed protein | - |
| 15 | Sobic.002G009100 | expressed protein | - |
| 16 | Sobic.005G220300 | OsWAK123 - OsWAK receptor-like protein kinase, expressed | - |
| 17 | Sobic.004G008300 | sphingolipid C4-hydroxylase SUR2, putative, expressed | K04713: sphinganine C4-monooxygenase |
| 18 | Sobic.002G258900 | "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@auxin responsive protein, putative, expressed | K14488: SAUR family protein |
| 19 | Sobic.002G178000 | senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed | - |
| 20 | Sobic.009G004950 | - | - |
Gene co-expression network
Octagon: transcription factors
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