Gene annotation
Transcriptome id Sobic.001G167701.1
Synonym -
Functional annotation -
UniProt A0A1Z5S630
Pfam PF08263 PF00560
Panther DB PTHR27004 PTHR27004:SF43
NCBI CDD KOG0472; Leucine-rich repeat protein
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G44700 : Leucine-rich repeat transmembrane protein kinase
RAP-DB (Rice) LOC_Os08g16580.1 : Cf2/Cf5 disease resistance protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G104201 - -
2 Sobic.001G183900 expressed protein -
3 Sobic.002G032033 - -
4 Sobic.005G216866 - -
5 Sobic.004G246950 - -
6 Sobic.004G224350 - -
7 Sobic.003G072100 D-mannose binding lectin family protein, expressed -
8 Sobic.002G397001 - -
9 Sobic.007G146800 late embryogenesis abundant protein, putative, expressed -
10 Sobic.005G167600 resistance protein, putative, expressed -
11 Sobic.001G018700 RD26, putative, expressed -
12 Sobic.001G018700 RD26, putative, expressed -
13 Sobic.001G018700 RD26, putative, expressed -
14 Sobic.001G018700 RD26, putative, expressed -
15 Sobic.001G018700 RD26, putative, expressed -
16 Sobic.001G018700 RD26, putative, expressed -
17 Sobic.001G018700 RD26, putative, expressed -
18 Sobic.001G018700 RD26, putative, expressed -
19 Sobic.001G018700 RD26, putative, expressed -
20 Sobic.001G018700 RD26, putative, expressed -


Gene co-expression network
sample Sobic001G167701 Sobic001G167701 Sobic007G104201 Sobic007G104201 Sobic001G167701--Sobic007G104201 Sobic001G183900 Sobic001G183900 Sobic001G167701--Sobic001G183900 Sobic002G032033 Sobic002G032033 Sobic001G167701--Sobic002G032033 Sobic005G216866 Sobic005G216866 Sobic001G167701--Sobic005G216866 Sobic004G246950 Sobic004G246950 Sobic001G167701--Sobic004G246950 Sobic004G224350 Sobic004G224350 Sobic001G167701--Sobic004G224350 Sobic003G072100 Sobic003G072100 Sobic001G167701--Sobic003G072100 Sobic002G397001 Sobic002G397001 Sobic001G167701--Sobic002G397001 Sobic007G146800 Sobic007G146800 Sobic001G167701--Sobic007G146800 Sobic007G104201--Sobic001G167701 Sobic002G034900 Sobic002G034900 Sobic007G104201--Sobic002G034900 Sobic001G110150 Sobic001G110150 Sobic007G104201--Sobic001G110150 Sobic007G104201--Sobic001G183900 Sobic007G104201--Sobic002G032033 Sobic009G196500 Sobic009G196500 Sobic007G104201--Sobic009G196500 Sobic003G095750 Sobic003G095750 Sobic007G104201--Sobic003G095750 Sobic007G104201--Sobic005G216866 Sobic003G075632 Sobic003G075632 Sobic007G104201--Sobic003G075632 Sobic001G183900--Sobic003G072100 Sobic001G183900--Sobic004G246950 Sobic001G183900--Sobic002G032033 Sobic001G018700 Sobic001G018700 Sobic001G183900--Sobic001G018700 Sobic002G032033--Sobic001G183900 Sobic002G032033--Sobic005G216866 Sobic002G032033--Sobic004G224350 Sobic002G032033--Sobic004G246950 Sobic005G167600 Sobic005G167600 Sobic002G032033--Sobic005G167600 Sobic003G268650 Sobic003G268650 Sobic002G032033--Sobic003G268650 Sobic002G032033--Sobic003G072100 Sobic002G032033--Sobic001G167701 Sobic002G430601 Sobic002G430601 Sobic002G032033--Sobic002G430601 Sobic005G216866--Sobic001G183900 Sobic005G216866--Sobic002G032033 Sobic005G216866--Sobic004G246950 Sobic001G338200 Sobic001G338200 Sobic005G216866--Sobic001G338200 Sobic005G216866--Sobic004G224350 Sobic010G090550 Sobic010G090550 Sobic005G216866--Sobic010G090550 Sobic005G216866--Sobic003G072100 Sobic005G216866--Sobic005G167600 Sobic005G216866--Sobic001G018700 Sobic004G246950--Sobic001G183900 Sobic004G246950--Sobic003G072100 Sobic004G246950--Sobic001G018700 Sobic004G224350--Sobic001G183900 Sobic004G224350--Sobic002G032033 Sobic003G090100 Sobic003G090100 Sobic004G224350--Sobic003G090100 Sobic005G207900 Sobic005G207900 Sobic004G224350--Sobic005G207900 Sobic004G224350--Sobic005G216866 Sobic004G224350--Sobic004G246950 Sobic004G224350--Sobic003G072100 Sobic004G224350--Sobic001G018700 Sobic006G089200 Sobic006G089200 Sobic003G072100--Sobic006G089200 Sobic003G072100--Sobic001G018700 Sobic002G397001--Sobic007G146800 Sobic009G072066 Sobic009G072066 Sobic002G397001--Sobic009G072066 Sobic008G082450 Sobic008G082450 Sobic002G397001--Sobic008G082450 Sobic010G140300 Sobic010G140300 Sobic002G397001--Sobic010G140300 Sobic002G397001--Sobic010G090550 Sobic002G397001--Sobic006G089200 Sobic002G397001--Sobic001G018700 Sobic007G146800--Sobic010G140300 Sobic007G146800--Sobic008G082450 Sobic007G146800--Sobic006G089200 Sobic007G146800--Sobic001G018700
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.