Gene annotation
Transcriptome id Sobic.001G336500.1,Sobic.001G336500.3,Sobic.001G336500.2
Synonym PGL1, Sb01g032450
Functional annotation 6-phosphogluconolactonase, putative, expressed
UniProt C5WWK0
Pfam PF01182
Panther DB PTHR11054 PTHR11054:SF2
NCBI CDD KOG3147; 6-phosphogluconolactonase - like protein
KEGG Orthology K01057; PGLS, pgl, 6-phosphogluconolactonase
Gene Ontology GO:0005975; carbohydrate metabolic process


Orthologs (automatic annotation)
TAIR AT1G13700 : 6-phosphogluconolactonase 1
RAP-DB (Rice) LOC_Os03g30300.1,LOC_Os03g30300.2 : 6-phosphogluconolactonase, putative, expressed
MaizeGDB (Corn) Zm00025a002877
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G336500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G158000 cytochrome P450 71E1, putative, expressed K13029: 4-hydroxyphenylacetaldehyde oxime monooxygenase
2 Sobic.001G164100 cytochrome P450, putative, expressed -
3 Sobic.009G068350 - -
4 Sobic.001G210200 RIPER9 - Ripening-related family protein precursor, putative, expressed -
5 Sobic.001G210200 RIPER9 - Ripening-related family protein precursor, putative, expressed -
6 Sobic.001G210200 RIPER9 - Ripening-related family protein precursor, putative, expressed -
7 Sobic.001G210200 RIPER9 - Ripening-related family protein precursor, putative, expressed -
8 Sobic.001G210200 RIPER9 - Ripening-related family protein precursor, putative, expressed -
9 Sobic.001G210200 RIPER9 - Ripening-related family protein precursor, putative, expressed -
10 Sobic.001G210200 RIPER9 - Ripening-related family protein precursor, putative, expressed -
11 Sobic.001G210200 RIPER9 - Ripening-related family protein precursor, putative, expressed -
12 Sobic.001G210200 RIPER9 - Ripening-related family protein precursor, putative, expressed -
13 Sobic.001G210200 RIPER9 - Ripening-related family protein precursor, putative, expressed -
14 Sobic.001G210200 RIPER9 - Ripening-related family protein precursor, putative, expressed -
15 Sobic.001G210200 RIPER9 - Ripening-related family protein precursor, putative, expressed -
16 Sobic.010G253500 cycloartenol synthase, putative, expressed K19011: achilleol B synthase
17 Sobic.001G147500 cytochrome P450, putative, expressed -
18 Sobic.010G054500 1-aminocyclopropane-1-carboxylate oxidase homolog 4, putative, expressed -
19 Sobic.001G210250 - -
20 Sobic.004G054200 avr9/Cf-9 rapidly elicited protein 137, putative, expressed -


Gene co-expression network
sample Sobic001G336500 Sobic001G336500 Sobic005G158000 Sobic005G158000 Sobic001G336500--Sobic005G158000 Sobic001G164100 Sobic001G164100 Sobic001G336500--Sobic001G164100 Sobic009G068350 Sobic009G068350 Sobic001G336500--Sobic009G068350 Sobic001G210200 Sobic001G210200 Sobic001G336500--Sobic001G210200 Sobic005G158000--Sobic001G164100 Sobic010G253500 Sobic010G253500 Sobic005G158000--Sobic010G253500 Sobic005G158000--Sobic001G210200 Sobic001G164100--Sobic001G210200 Sobic001G479850 Sobic001G479850 Sobic009G068350--Sobic001G479850 Sobic009G068350--Sobic001G336500 Sobic009G068350--Sobic001G210200 Sobic001G210200--Sobic001G210200
Octagon: transcription factors


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