Gene annotation
Transcriptome id Sobic.001G371650.1
Synonym -
Functional annotation -
UniProt A0A1Z5SA34
Pfam PF01344
Panther DB PTHR24412 PTHR24412:SF228
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G01660 : -
RAP-DB (Rice) LOC_Os05g07220.1 : kelch repeat-containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a042909 , Zm00025a042916
Brachypodium -
Barley HORVU1Hr1G024460.18 , HORVU1Hr1G024460.12 , HORVU1Hr1G024460.11 , HORVU1Hr1G024460.10 , HORVU1Hr1G024460.15 , HORVU1Hr1G024460.14 , HORVU1Hr1G024460.22 , HORVU1Hr1G024460.20 , HORVU1Hr1G024460.21 , HORVU3Hr1G017930.24 , HORVU3Hr1G017930.21 , HORVU3Hr1G017930.22 , HORVU3Hr1G017930.23 , HORVU3Hr1G017930.7 , HORVU3Hr1G017930.6 , HORVU3Hr1G017930.1 , HORVU3Hr1G017930.3 , HORVU3Hr1G017930.2 , HORVU1Hr1G024460.3 , HORVU1Hr1G024460.2 , HORVU1Hr1G024460.1 , HORVU3Hr1G017930.8 , HORVU1Hr1G024460.4 , HORVU1Hr1G024460.9 , HORVU1Hr1G024460.8 , HORVU3Hr1G017930.11 , HORVU3Hr1G017930.10 , HORVU3Hr1G017930.12 , HORVU3Hr1G017930.14 , HORVU3Hr1G017930.17 , HORVU3Hr1G017930.16 , HORVU3Hr1G017930.19 , HORVU3Hr1G017930.18 , HORVU1Hr1G024460.6 , HORVU1Hr1G024460.5
Wheat TraesCS1D02G112800 , TraesCS3B02G115100 , TraesCS3A02G098900 , TraesCS3A02G098900 , TraesCS3D02G099300 , TraesCS1B02G131600 , TraesCS1A02G111300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G054800 "O2(Ortholog in maize:Hartings et al., 1989)"(PubMedID : 31659852)@bZIP transcription factor domain containing protein, expressed -
2 Sobic.002G240200 expressed protein K19307: 25S rRNA (uracil2634-N3)-methyltransferase
3 Sobic.002G132201 - -
4 Sobic.001G071500 - -
5 Sobic.010G215201 - -
6 Sobic.005G073300 limonoid UDP-glucosyltransferase, putative, expressed -
7 Sobic.007G032200 - -
8 Sobic.008G030801 - -
9 Sobic.002G172300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.001G421100 - -
11 Sobic.007G072700 - -
12 Sobic.003G253650 - -
13 Sobic.001G297900 aminotransferase, classes I and II, domain containing protein, expressed K00652: 8-amino-7-oxononanoate synthase
14 Sobic.009G022600 - -
15 Sobic.004G264800 expressed protein -
16 Sobic.004G282200 DUF623 domain containing protein, expressed -
17 Sobic.003G149700 FAD dependent oxidoreductase domain containing protein, expressed K00306: sarcosine oxidase / L-pipecolate oxidase
18 Sobic.010G011500 - -
19 Sobic.006G141200 - -
20 Sobic.006G161200 cysteine-rich repeat secretory protein precursor, putative, expressed -


Gene co-expression network
sample Sobic001G371650 Sobic001G371650 Sobic002G054800 Sobic002G054800 Sobic001G371650--Sobic002G054800 Sobic002G240200 Sobic002G240200 Sobic001G371650--Sobic002G240200 Sobic002G132201 Sobic002G132201 Sobic001G371650--Sobic002G132201 Sobic001G071500 Sobic001G071500 Sobic001G371650--Sobic001G071500 Sobic010G215201 Sobic010G215201 Sobic001G371650--Sobic010G215201 Sobic005G073300 Sobic005G073300 Sobic001G371650--Sobic005G073300 Sobic007G032200 Sobic007G032200 Sobic001G371650--Sobic007G032200 Sobic008G030801 Sobic008G030801 Sobic001G371650--Sobic008G030801 Sobic002G172300 Sobic002G172300 Sobic001G371650--Sobic002G172300 Sobic002G054800--Sobic005G073300 Sobic002G054800--Sobic002G132201 Sobic002G054800--Sobic001G071500 Sobic002G054800--Sobic002G240200 Sobic002G054800--Sobic010G215201 Sobic003G149700 Sobic003G149700 Sobic002G054800--Sobic003G149700 Sobic002G054800--Sobic001G371650 Sobic009G022600 Sobic009G022600 Sobic002G054800--Sobic009G022600 Sobic002G054800--Sobic008G030801 Sobic002G240200--Sobic002G054800 Sobic002G240200--Sobic001G071500 Sobic002G240200--Sobic005G073300 Sobic002G240200--Sobic010G215201 Sobic002G240200--Sobic002G132201 Sobic001G421100 Sobic001G421100 Sobic002G240200--Sobic001G421100 Sobic002G240200--Sobic001G371650 Sobic002G240200--Sobic008G030801 Sobic002G240200--Sobic003G149700 Sobic002G132201--Sobic002G054800 Sobic002G132201--Sobic005G073300 Sobic002G132201--Sobic003G149700 Sobic002G132201--Sobic001G071500 Sobic002G132201--Sobic002G240200 Sobic002G132201--Sobic009G022600 Sobic002G132201--Sobic010G215201 Sobic002G132201--Sobic001G371650 Sobic006G155400 Sobic006G155400 Sobic002G132201--Sobic006G155400 Sobic001G071500--Sobic002G054800 Sobic001G071500--Sobic005G073300 Sobic001G071500--Sobic002G240200 Sobic001G071500--Sobic010G215201 Sobic001G071500--Sobic002G132201 Sobic001G071500--Sobic008G030801 Sobic001G071500--Sobic002G172300 Sobic001G071500--Sobic003G149700 Sobic001G071500--Sobic001G371650 Sobic010G215201--Sobic002G054800 Sobic010G215201--Sobic001G071500 Sobic010G215201--Sobic002G240200 Sobic010G215201--Sobic005G073300 Sobic010G215201--Sobic008G030801 Sobic010G215201--Sobic002G132201 Sobic010G215201--Sobic002G172300 Sobic010G215201--Sobic001G371650 Sobic010G215201--Sobic001G421100 Sobic005G073300--Sobic002G054800 Sobic005G073300--Sobic002G132201 Sobic005G073300--Sobic001G071500 Sobic005G073300--Sobic002G240200 Sobic005G073300--Sobic010G215201 Sobic005G073300--Sobic003G149700 Sobic005G073300--Sobic009G022600 Sobic005G073300--Sobic002G172300 Sobic005G073300--Sobic008G030801 Sobic007G032200--Sobic001G371650 Sobic007G032200--Sobic002G132201 Sobic007G032200--Sobic002G054800 Sobic007G032200--Sobic002G240200 Sobic004G282200 Sobic004G282200 Sobic007G032200--Sobic004G282200 Sobic007G032200--Sobic005G073300 Sobic003G048900 Sobic003G048900 Sobic007G032200--Sobic003G048900 Sobic007G032200--Sobic001G071500 Sobic007G032200--Sobic009G022600 Sobic008G030801--Sobic001G071500 Sobic010G011500 Sobic010G011500 Sobic008G030801--Sobic010G011500 Sobic001G297900 Sobic001G297900 Sobic008G030801--Sobic001G297900 Sobic002G055000 Sobic002G055000 Sobic008G030801--Sobic002G055000 Sobic008G030801--Sobic010G215201 Sobic001G480900 Sobic001G480900 Sobic008G030801--Sobic001G480900 Sobic003G229900 Sobic003G229900 Sobic008G030801--Sobic003G229900 Sobic006G049633 Sobic006G049633 Sobic008G030801--Sobic006G049633 Sobic008G030801--Sobic002G054800 Sobic002G172300--Sobic002G054800 Sobic002G172300--Sobic001G071500 Sobic002G172300--Sobic008G030801 Sobic002G172300--Sobic010G215201 Sobic002G172300--Sobic005G073300 Sobic002G172300--Sobic002G132201 Sobic002G172300--Sobic002G240200 Sobic002G172300--Sobic001G371650 Sobic002G172300--Sobic001G421100
Octagon: transcription factors


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