Gene annotation
Transcriptome id Sobic.007G032200.1
Synonym
Functional annotation -
UniProt C5YMY3 , Q8W0T6
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G371650 - -
2 Sobic.002G132201 - -
3 Sobic.002G054800 "O2(Ortholog in maize:Hartings et al., 1989)"(PubMedID : 31659852)@bZIP transcription factor domain containing protein, expressed -
4 Sobic.002G240200 expressed protein K19307: 25S rRNA (uracil2634-N3)-methyltransferase
5 Sobic.004G282200 DUF623 domain containing protein, expressed -
6 Sobic.005G073300 limonoid UDP-glucosyltransferase, putative, expressed -
7 Sobic.003G048900 - -
8 Sobic.001G071500 - -
9 Sobic.009G022600 - -
10 Sobic.004G264800 expressed protein -
11 Sobic.007G072700 - -
12 Sobic.010G215201 - -
13 Sobic.006G155400 expressed protein -
14 Sobic.003G193900 - -
15 Sobic.003G149700 FAD dependent oxidoreductase domain containing protein, expressed K00306: sarcosine oxidase / L-pipecolate oxidase
16 Sobic.007G156400 Up-reguralion under drought(PubMedID : 24916767)@alpha-amylase precursor, putative, expressed K01176: AMY, amyA, alpha-amylase
17 Sobic.001G421100 - -
18 Sobic.002G172300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.001G468900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@DUF623 domain containing protein, expressed -
20 Sobic.003G253650 - -


Gene co-expression network
sample Sobic007G032200 Sobic007G032200 Sobic001G371650 Sobic001G371650 Sobic007G032200--Sobic001G371650 Sobic002G132201 Sobic002G132201 Sobic007G032200--Sobic002G132201 Sobic002G054800 Sobic002G054800 Sobic007G032200--Sobic002G054800 Sobic002G240200 Sobic002G240200 Sobic007G032200--Sobic002G240200 Sobic004G282200 Sobic004G282200 Sobic007G032200--Sobic004G282200 Sobic005G073300 Sobic005G073300 Sobic007G032200--Sobic005G073300 Sobic003G048900 Sobic003G048900 Sobic007G032200--Sobic003G048900 Sobic001G071500 Sobic001G071500 Sobic007G032200--Sobic001G071500 Sobic009G022600 Sobic009G022600 Sobic007G032200--Sobic009G022600 Sobic001G371650--Sobic002G054800 Sobic001G371650--Sobic002G240200 Sobic001G371650--Sobic002G132201 Sobic001G371650--Sobic001G071500 Sobic010G215201 Sobic010G215201 Sobic001G371650--Sobic010G215201 Sobic001G371650--Sobic005G073300 Sobic001G371650--Sobic007G032200 Sobic008G030801 Sobic008G030801 Sobic001G371650--Sobic008G030801 Sobic002G172300 Sobic002G172300 Sobic001G371650--Sobic002G172300 Sobic002G132201--Sobic002G054800 Sobic002G132201--Sobic005G073300 Sobic003G149700 Sobic003G149700 Sobic002G132201--Sobic003G149700 Sobic002G132201--Sobic001G071500 Sobic002G132201--Sobic002G240200 Sobic002G132201--Sobic009G022600 Sobic002G132201--Sobic010G215201 Sobic002G132201--Sobic001G371650 Sobic006G155400 Sobic006G155400 Sobic002G132201--Sobic006G155400 Sobic002G054800--Sobic005G073300 Sobic002G054800--Sobic002G132201 Sobic002G054800--Sobic001G071500 Sobic002G054800--Sobic002G240200 Sobic002G054800--Sobic010G215201 Sobic002G054800--Sobic003G149700 Sobic002G054800--Sobic001G371650 Sobic002G054800--Sobic009G022600 Sobic002G054800--Sobic008G030801 Sobic002G240200--Sobic002G054800 Sobic002G240200--Sobic001G071500 Sobic002G240200--Sobic005G073300 Sobic002G240200--Sobic010G215201 Sobic002G240200--Sobic002G132201 Sobic001G421100 Sobic001G421100 Sobic002G240200--Sobic001G421100 Sobic002G240200--Sobic001G371650 Sobic002G240200--Sobic008G030801 Sobic002G240200--Sobic003G149700 Sobic004G264800 Sobic004G264800 Sobic004G282200--Sobic004G264800 Sobic007G072700 Sobic007G072700 Sobic004G282200--Sobic007G072700 Sobic004G282200--Sobic001G371650 Sobic007G156400 Sobic007G156400 Sobic004G282200--Sobic007G156400 Sobic004G282200--Sobic007G032200 Sobic004G282200--Sobic008G030801 Sobic004G282200--Sobic002G172300 Sobic009G239400 Sobic009G239400 Sobic004G282200--Sobic009G239400 Sobic004G020150 Sobic004G020150 Sobic004G282200--Sobic004G020150 Sobic005G073300--Sobic002G054800 Sobic005G073300--Sobic002G132201 Sobic005G073300--Sobic001G071500 Sobic005G073300--Sobic002G240200 Sobic005G073300--Sobic010G215201 Sobic005G073300--Sobic003G149700 Sobic005G073300--Sobic009G022600 Sobic005G073300--Sobic002G172300 Sobic005G073300--Sobic008G030801 Sobic010G200300 Sobic010G200300 Sobic003G048900--Sobic010G200300 Sobic002G094700 Sobic002G094700 Sobic003G048900--Sobic002G094700 Sobic001G259200 Sobic001G259200 Sobic003G048900--Sobic001G259200 Sobic010G207450 Sobic010G207450 Sobic003G048900--Sobic010G207450 Sobic003G048900--Sobic007G032200 Sobic001G221750 Sobic001G221750 Sobic003G048900--Sobic001G221750 Sobic007G069750 Sobic007G069750 Sobic003G048900--Sobic007G069750 Sobic001G112300 Sobic001G112300 Sobic003G048900--Sobic001G112300 Sobic007G091800 Sobic007G091800 Sobic003G048900--Sobic007G091800 Sobic001G071500--Sobic002G054800 Sobic001G071500--Sobic005G073300 Sobic001G071500--Sobic002G240200 Sobic001G071500--Sobic010G215201 Sobic001G071500--Sobic002G132201 Sobic001G071500--Sobic008G030801 Sobic001G071500--Sobic002G172300 Sobic001G071500--Sobic003G149700 Sobic001G071500--Sobic001G371650 Sobic004G037401 Sobic004G037401 Sobic009G022600--Sobic004G037401 Sobic009G022600--Sobic002G132201 Sobic009G022600--Sobic005G073300 Sobic009G022600--Sobic003G149700 Sobic009G022600--Sobic002G054800 Sobic009G022600--Sobic006G155400 Sobic005G150250 Sobic005G150250 Sobic009G022600--Sobic005G150250 Sobic009G022600--Sobic001G071500 Sobic009G022600--Sobic002G240200
Octagon: transcription factors


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