Gene annotation
Transcriptome id Sobic.001G378700.1
Synonym GPX6, PHGPX, Sb01g035940, ATGPX6, LSC803
Functional annotation glutathione peroxidase, putative, expressed
UniProt A0A1B6QND5
Pfam PF00578
Panther DB PTHR11592 PTHR11592:SF42
NCBI CDD KOG1651; Glutathione peroxidase
KEGG Orthology K00432; gpx, btuE, glutathione peroxidase
Gene Ontology GO:0016491; oxidoreductase activity GO:0016209antioxidant activity GO:0006979response to oxidative stress GO:0004602glutathione peroxidase activity


Orthologs (automatic annotation)
TAIR AT4G11600 : glutathione peroxidase 6
RAP-DB (Rice) LOC_Os02g44500.1 : glutathione peroxidase, putative, expressed
MaizeGDB (Corn) Zm00025a002377 , Zm00025a032236
Brachypodium -
Barley HORVU6Hr1G063830.10 , HORVU6Hr1G063830.2 , HORVU6Hr1G063830.3 , HORVU6Hr1G063830.8 , HORVU6Hr1G063830.9
Wheat TraesCS6A02G246400 , TraesCS6D02G228800 , TraesCS6B02G278100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G076300 expressed protein -
2 Sobic.007G066508 - -
3 Sobic.002G009100 expressed protein -
4 Sobic.002G009100 expressed protein -
5 Sobic.002G009100 expressed protein -
6 Sobic.002G009100 expressed protein -
7 Sobic.002G009100 expressed protein -
8 Sobic.002G009100 expressed protein -
9 Sobic.002G009100 expressed protein -
10 Sobic.002G009100 expressed protein -
11 Sobic.002G009100 expressed protein -
12 Sobic.002G009100 expressed protein -
13 Sobic.002G009100 expressed protein -
14 Sobic.002G009100 expressed protein -
15 Sobic.002G009100 expressed protein -
16 Sobic.003G204300 expressed protein -
17 Sobic.004G008300 sphingolipid C4-hydroxylase SUR2, putative, expressed K04713: sphinganine C4-monooxygenase
18 Sobic.002G377600 patatin, putative, expressed -
19 Sobic.010G222200 MBTB11 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
20 Sobic.001G027300 haloacid dehalogenase-like hydrolase family protein, putative, expressed -


Gene co-expression network
sample Sobic001G378700 Sobic001G378700 Sobic009G076300 Sobic009G076300 Sobic001G378700--Sobic009G076300 Sobic007G066508 Sobic007G066508 Sobic001G378700--Sobic007G066508 Sobic002G009100 Sobic002G009100 Sobic001G378700--Sobic002G009100 Sobic004G008300 Sobic004G008300 Sobic009G076300--Sobic004G008300 Sobic003G204300 Sobic003G204300 Sobic009G076300--Sobic003G204300 Sobic003G204400 Sobic003G204400 Sobic009G076300--Sobic003G204400 Sobic009G004950 Sobic009G004950 Sobic009G076300--Sobic009G004950 Sobic009G076300--Sobic007G066508 Sobic005G220300 Sobic005G220300 Sobic009G076300--Sobic005G220300 Sobic009G076300--Sobic002G009100 Sobic007G066824 Sobic007G066824 Sobic007G066508--Sobic007G066824 Sobic007G066508--Sobic009G076300 Sobic007G066508--Sobic009G004950 Sobic002G258900 Sobic002G258900 Sobic007G066508--Sobic002G258900 Sobic007G066508--Sobic003G204400 Sobic007G066508--Sobic003G204300 Sobic005G066200 Sobic005G066200 Sobic007G066508--Sobic005G066200 Sobic007G066508--Sobic004G008300 Sobic010G126800 Sobic010G126800 Sobic007G066508--Sobic010G126800 Sobic002G009100--Sobic002G009100
Octagon: transcription factors


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