Gene annotation
Transcriptome id Sobic.001G466400.1
Synonym Sb01g043760
Functional annotation glycosyl hydrolase family 10 protein, putative, expressed
UniProt A0A1B6QPT9
Pfam PF00331
Panther DB PTHR31490 PTHR31490:SF13
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT4G33840 : Glycosyl hydrolase family 10 protein
RAP-DB (Rice) LOC_Os03g10440.1 : glycosyl hydrolase family 10 protein, putative, expressed
MaizeGDB (Corn) Zm00025a001161 , Zm00025a003966 , Zm00025a053144 , Zm00025a053145 , Zm00025a017127
Brachypodium KQK13823 , PNT76981 , KQK23061 , KQK23063 , PNT67306
Barley HORVU4Hr1G063790.28 , HORVU4Hr1G063790.20 , HORVU4Hr1G063790.21 , HORVU4Hr1G063790.22 , HORVU4Hr1G063790.23 , HORVU4Hr1G063790.24 , HORVU4Hr1G063790.25 , HORVU4Hr1G063790.26 , HORVU4Hr1G063790.27 , HORVU4Hr1G070310.20 , HORVU4Hr1G070310.21 , HORVU4Hr1G070310.22 , HORVU1Hr1G023120.3 , HORVU1Hr1G023120.2 , HORVU1Hr1G023120.1 , HORVU4Hr1G063790.15 , HORVU4Hr1G063790.14 , HORVU4Hr1G063790.17 , HORVU4Hr1G063790.16 , HORVU4Hr1G063790.11 , HORVU4Hr1G063790.10 , HORVU4Hr1G063790.13 , HORVU4Hr1G063790.12 , HORVU4Hr1G070310.19 , HORVU4Hr1G070310.18 , HORVU4Hr1G070310.11 , HORVU4Hr1G070310.13 , HORVU4Hr1G070310.12 , HORVU4Hr1G070310.15 , HORVU4Hr1G070310.14 , HORVU2Hr1G113150.1 , HORVU4Hr1G070260.11 , HORVU4Hr1G070260.10 , HORVU4Hr1G070260.13 , HORVU4Hr1G070260.12 , HORVU4Hr1G070260.15 , HORVU4Hr1G070260.14 , HORVU2Hr1G122890.1 , HORVU2Hr1G122890.2 , HORVU2Hr1G122890.3 , HORVU2Hr1G122890.4 , HORVU2Hr1G122890.5 , HORVU2Hr1G122890.6 , HORVU5Hr1G056740.4 , HORVU5Hr1G056740.3 , HORVU5Hr1G056740.2 , HORVU5Hr1G056740.1 , HORVU4Hr1G003220.3 , HORVU4Hr1G003220.2 , HORVU4Hr1G003220.1 , HORVU4Hr1G003220.5 , HORVU4Hr1G003220.4 , HORVU4Hr1G063790.19 , HORVU4Hr1G063790.18 , HORVU4Hr1G063790.9 , HORVU4Hr1G063790.8 , HORVU4Hr1G063790.1 , HORVU4Hr1G063790.3 , HORVU4Hr1G063790.2 , HORVU4Hr1G063790.5 , HORVU4Hr1G063790.4 , HORVU4Hr1G063790.7 , HORVU4Hr1G063790.6
Wheat TraesCS4A02G071100 , TraesCS4B02G259100 , TraesCS4A02G071100 , TraesCS4D02G259100 , TraesCS5D02G194800 , TraesCS4B02G021800 , TraesCS4D02G259500 , TraesCSU02G021800 , TraesCS1D02G107700 , TraesCS4B02G227000 , TraesCS1A02G107100 , TraesCS5A02G196500 , TraesCS4D02G227700 , TraesCS2A02G584800 , TraesCS4A02G045800 , TraesCS4B02G259400 , TraesCS5A02G196600 , TraesCS4D02G019500 , TraesCS1B02G124500 , TraesCS4A02G045500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G204300 expressed protein -
2 Sobic.009G076300 expressed protein -
3 Sobic.005G197800 lysM domain containing protein, putative -
4 Sobic.004G008300 sphingolipid C4-hydroxylase SUR2, putative, expressed K04713: sphinganine C4-monooxygenase
5 Sobic.009G004950 - -
6 Sobic.001G045800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@polygalacturonase, putative, expressed -
7 Sobic.010G126800 lectin-like receptor kinase 7, putative, expressed -
8 Sobic.002G009100 expressed protein -
9 Sobic.002G009100 expressed protein -
10 Sobic.002G009100 expressed protein -
11 Sobic.002G009100 expressed protein -
12 Sobic.002G009100 expressed protein -
13 Sobic.002G009100 expressed protein -
14 Sobic.002G009100 expressed protein -
15 Sobic.002G009100 expressed protein -
16 Sobic.002G009100 expressed protein -
17 Sobic.002G009100 expressed protein -
18 Sobic.002G009100 expressed protein -
19 Sobic.002G009100 expressed protein -
20 Sobic.002G009100 expressed protein -


Gene co-expression network
sample Sobic001G466400 Sobic001G466400 Sobic003G204300 Sobic003G204300 Sobic001G466400--Sobic003G204300 Sobic009G076300 Sobic009G076300 Sobic001G466400--Sobic009G076300 Sobic005G197800 Sobic005G197800 Sobic001G466400--Sobic005G197800 Sobic004G008300 Sobic004G008300 Sobic001G466400--Sobic004G008300 Sobic009G004950 Sobic009G004950 Sobic001G466400--Sobic009G004950 Sobic001G045800 Sobic001G045800 Sobic001G466400--Sobic001G045800 Sobic010G126800 Sobic010G126800 Sobic001G466400--Sobic010G126800 Sobic002G009100 Sobic002G009100 Sobic001G466400--Sobic002G009100 Sobic003G204300--Sobic004G008300 Sobic003G204300--Sobic009G004950 Sobic003G204300--Sobic002G009100 Sobic009G076300--Sobic004G008300 Sobic009G076300--Sobic003G204300 Sobic003G204400 Sobic003G204400 Sobic009G076300--Sobic003G204400 Sobic009G076300--Sobic009G004950 Sobic007G066508 Sobic007G066508 Sobic009G076300--Sobic007G066508 Sobic005G220300 Sobic005G220300 Sobic009G076300--Sobic005G220300 Sobic009G076300--Sobic002G009100 Sobic005G197800--Sobic001G045800 Sobic007G050500 Sobic007G050500 Sobic005G197800--Sobic007G050500 Sobic003G075566 Sobic003G075566 Sobic005G197800--Sobic003G075566 Sobic003G418300 Sobic003G418300 Sobic005G197800--Sobic003G418300 Sobic005G197800--Sobic001G466400 Sobic005G025900 Sobic005G025900 Sobic005G197800--Sobic005G025900 Sobic002G016400 Sobic002G016400 Sobic005G197800--Sobic002G016400 Sobic001G454800 Sobic001G454800 Sobic005G197800--Sobic001G454800 Sobic008G170400 Sobic008G170400 Sobic005G197800--Sobic008G170400 Sobic004G008300--Sobic003G204300 Sobic005G066200 Sobic005G066200 Sobic004G008300--Sobic005G066200 Sobic004G008300--Sobic009G004950 Sobic004G008300--Sobic003G204400 Sobic004G008300--Sobic009G076300 Sobic004G008300--Sobic010G126800 Sobic009G177000 Sobic009G177000 Sobic004G008300--Sobic009G177000 Sobic010G117500 Sobic010G117500 Sobic004G008300--Sobic010G117500 Sobic007G119750 Sobic007G119750 Sobic004G008300--Sobic007G119750 Sobic009G004950--Sobic010G126800 Sobic009G004950--Sobic003G204300 Sobic009G004950--Sobic005G066200 Sobic002G409200 Sobic002G409200 Sobic009G004950--Sobic002G409200 Sobic009G004950--Sobic004G008300 Sobic009G004950--Sobic007G119750 Sobic002G063700 Sobic002G063700 Sobic009G004950--Sobic002G063700 Sobic005G069332 Sobic005G069332 Sobic009G004950--Sobic005G069332 Sobic008G105800 Sobic008G105800 Sobic009G004950--Sobic008G105800 Sobic001G045800--Sobic005G197800 Sobic008G113900 Sobic008G113900 Sobic001G045800--Sobic008G113900 Sobic002G226500 Sobic002G226500 Sobic001G045800--Sobic002G226500 Sobic006G030200 Sobic006G030200 Sobic001G045800--Sobic006G030200 Sobic010G022500 Sobic010G022500 Sobic001G045800--Sobic010G022500 Sobic001G045800--Sobic001G466400 Sobic006G149300 Sobic006G149300 Sobic001G045800--Sobic006G149300 Sobic007G018100 Sobic007G018100 Sobic001G045800--Sobic007G018100 Sobic001G045800--Sobic003G418300 Sobic010G126800--Sobic007G119750 Sobic010G126800--Sobic005G066200 Sobic010G126800--Sobic009G004950 Sobic002G019000 Sobic002G019000 Sobic010G126800--Sobic002G019000 Sobic003G161400 Sobic003G161400 Sobic010G126800--Sobic003G161400 Sobic010G242800 Sobic010G242800 Sobic010G126800--Sobic010G242800 Sobic010G126800--Sobic002G063700 Sobic005G197350 Sobic005G197350 Sobic010G126800--Sobic005G197350 Sobic010G126800--Sobic008G105800 Sobic002G009100--Sobic002G009100
Octagon: transcription factors


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