Gene annotation
Transcriptome id Sobic.002G008600.2,Sobic.002G008600.3
Synonym ATWRKY57, Sb02g000960, WRKY57
Functional annotation WRKY29, expressed
UniProt C5X794 , A0A1B6Q8N5
Pfam PF03106
Panther DB PTHR31221:SF8 PTHR31221
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0003700; DNA-binding transcription factor activity GO:0006355regulation of transcription, DNA-templated


Orthologs (automatic annotation)
TAIR AT1G69310 : WRKY DNA-binding protein 57
RAP-DB (Rice) LOC_Os03g55080.1 : WRKY3, expressed
MaizeGDB (Corn) Zm00025a044883 , Zm00025a008225
Brachypodium KQK04850 , KQK13107 , PNT74111 , KQJ92544
Barley HORVU1Hr1G081570.1 , HORVU1Hr1G081570.2 , HORVU0Hr1G003340.8 , HORVU0Hr1G003340.9 , HORVU0Hr1G003340.4 , HORVU0Hr1G003340.5 , HORVU0Hr1G003340.6 , HORVU0Hr1G003340.7 , HORVU0Hr1G003340.1 , HORVU0Hr1G003340.2 , HORVU0Hr1G003340.3 , HORVU0Hr1G003340.12 , HORVU0Hr1G003340.13 , HORVU0Hr1G003340.10 , HORVU0Hr1G003340.11 , HORVU1Hr1G088300.1 , HORVU1Hr1G088300.2 , HORVU1Hr1G088300.3
Wheat TraesCS1D02G351600 , TraesCS5B02G399900 , TraesCS1A02G401800 , TraesCS2B02G280300 , TraesCS2A02G261900 , TraesCS1A02G348600 , TraesCS2D02G262100 , TraesCS5A02G395100 , TraesCS5A02G395100 , TraesCS5D02G404400 , TraesCS5D02G404400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G355900 LTPL64 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
2 Sobic.004G041700 expressed protein -
3 Sobic.007G179000 LRP1, putative, expressed -
4 Sobic.005G054800 glyoxal oxidase-related, putative, expressed -
5 Sobic.003G009800 expressed protein -
6 Sobic.002G165500 LTPL4 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
7 Sobic.003G444400 expansin precursor, putative, expressed -
8 Sobic.006G137000 protein phosphatase 2C, putative, expressed K17499: PPM1G, protein phosphatase 1G
9 Sobic.007G029900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
10 Sobic.006G079500 AMP-binding domain containing protein, expressed -
11 Sobic.004G318800 SMP-30/Gluconolaconase/LRE-like region containing protein, expressed -
12 Sobic.001G310200 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
13 Sobic.001G159100 expressed protein -
14 Sobic.001G341700 "GS3(Ortholog in rice:Mao et al., 2010(PubMedID : 31659843)@ Li et al., 2010)"(PubMedID : 32497208)@keratin-associated protein 5-4, putative, expressed -
15 Sobic.007G206000 dihydroflavonol-4-reductase, putative, expressed -
16 Sobic.006G089700 LTPL94 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
17 Sobic.007G180700 LTPL44 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
18 Sobic.007G076100 transferase family protein, putative, expressed -
19 Sobic.010G062200 expressed protein -
20 Sobic.006G098300 alpha/beta hydrolase fold, putative, expressed -


Gene co-expression network
sample Sobic002G008600 Sobic002G008600 Sobic002G355900 Sobic002G355900 Sobic002G008600--Sobic002G355900 Sobic004G041700 Sobic004G041700 Sobic002G008600--Sobic004G041700 Sobic007G179000 Sobic007G179000 Sobic002G008600--Sobic007G179000 Sobic005G054800 Sobic005G054800 Sobic002G008600--Sobic005G054800 Sobic003G009800 Sobic003G009800 Sobic002G008600--Sobic003G009800 Sobic002G165500 Sobic002G165500 Sobic002G008600--Sobic002G165500 Sobic003G444400 Sobic003G444400 Sobic002G008600--Sobic003G444400 Sobic006G137000 Sobic006G137000 Sobic002G008600--Sobic006G137000 Sobic007G029900 Sobic007G029900 Sobic002G008600--Sobic007G029900 Sobic002G355900--Sobic003G009800 Sobic001G159100 Sobic001G159100 Sobic002G355900--Sobic001G159100 Sobic007G180700 Sobic007G180700 Sobic002G355900--Sobic007G180700 Sobic002G355900--Sobic003G444400 Sobic006G098300 Sobic006G098300 Sobic002G355900--Sobic006G098300 Sobic002G399600 Sobic002G399600 Sobic002G355900--Sobic002G399600 Sobic002G270400 Sobic002G270400 Sobic002G355900--Sobic002G270400 Sobic006G267400 Sobic006G267400 Sobic002G355900--Sobic006G267400 Sobic007G107500 Sobic007G107500 Sobic002G355900--Sobic007G107500 Sobic004G041700--Sobic005G054800 Sobic004G041700--Sobic006G137000 Sobic004G041700--Sobic007G029900 Sobic004G041700--Sobic002G165500 Sobic005G010600 Sobic005G010600 Sobic004G041700--Sobic005G010600 Sobic004G041700--Sobic007G180700 Sobic004G041700--Sobic006G098300 Sobic004G041700--Sobic006G267400 Sobic003G004900 Sobic003G004900 Sobic004G041700--Sobic003G004900 Sobic007G179000--Sobic002G355900 Sobic008G012600 Sobic008G012600 Sobic007G179000--Sobic008G012600 Sobic001G341700 Sobic001G341700 Sobic007G179000--Sobic001G341700 Sobic006G092300 Sobic006G092300 Sobic007G179000--Sobic006G092300 Sobic007G179000--Sobic001G159100 Sobic007G179000--Sobic003G009800 Sobic003G382400 Sobic003G382400 Sobic007G179000--Sobic003G382400 Sobic010G049600 Sobic010G049600 Sobic007G179000--Sobic010G049600 Sobic001G491400 Sobic001G491400 Sobic007G179000--Sobic001G491400 Sobic005G054800--Sobic006G137000 Sobic005G054800--Sobic007G180700 Sobic005G054800--Sobic006G098300 Sobic005G054800--Sobic007G029900 Sobic005G054800--Sobic002G165500 Sobic005G054800--Sobic006G267400 Sobic005G054800--Sobic005G010600 Sobic005G054800--Sobic003G004900 Sobic002G173300 Sobic002G173300 Sobic005G054800--Sobic002G173300 Sobic003G009800--Sobic002G355900 Sobic003G009800--Sobic001G159100 Sobic003G271700 Sobic003G271700 Sobic003G009800--Sobic003G271700 Sobic007G206000 Sobic007G206000 Sobic003G009800--Sobic007G206000 Sobic010G236000 Sobic010G236000 Sobic003G009800--Sobic010G236000 Sobic002G410600 Sobic002G410600 Sobic003G009800--Sobic002G410600 Sobic003G038700 Sobic003G038700 Sobic003G009800--Sobic003G038700 Sobic003G009800--Sobic007G180700 Sobic004G202800 Sobic004G202800 Sobic003G009800--Sobic004G202800 Sobic001G366000 Sobic001G366000 Sobic002G165500--Sobic001G366000 Sobic002G165500--Sobic007G180700 Sobic007G000600 Sobic007G000600 Sobic002G165500--Sobic007G000600 Sobic002G165500--Sobic006G098300 Sobic002G165500--Sobic007G029900 Sobic005G200700 Sobic005G200700 Sobic002G165500--Sobic005G200700 Sobic002G165500--Sobic006G267400 Sobic002G165500--Sobic002G399600 Sobic002G165500--Sobic002G270400 Sobic003G444400--Sobic002G355900 Sobic003G444400--Sobic003G009800 Sobic003G444400--Sobic001G159100 Sobic003G444400--Sobic007G180700 Sobic003G444400--Sobic002G165500 Sobic003G444400--Sobic003G004900 Sobic003G444400--Sobic005G054800 Sobic003G444400--Sobic006G137000 Sobic003G444400--Sobic006G267400 Sobic006G137000--Sobic006G267400 Sobic006G137000--Sobic003G004900 Sobic006G137000--Sobic005G054800 Sobic001G102600 Sobic001G102600 Sobic006G137000--Sobic001G102600 Sobic006G137000--Sobic007G180700 Sobic006G137000--Sobic006G098300 Sobic010G189366 Sobic010G189366 Sobic006G137000--Sobic010G189366 Sobic004G349150 Sobic004G349150 Sobic006G137000--Sobic004G349150 Sobic006G137000--Sobic002G173300 Sobic007G029900--Sobic006G098300 Sobic007G029900--Sobic002G399600 Sobic007G029900--Sobic007G206000 Sobic007G029900--Sobic002G270400 Sobic007G029900--Sobic005G200700 Sobic005G226500 Sobic005G226500 Sobic007G029900--Sobic005G226500 Sobic001G334501 Sobic001G334501 Sobic007G029900--Sobic001G334501 Sobic007G029900--Sobic007G107500 Sobic007G037400 Sobic007G037400 Sobic007G029900--Sobic007G037400
Octagon: transcription factors


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