Gene annotation
Transcriptome id Sobic.007G179000.1
Synonym Sb07g025020, STY1, SRS1
Functional annotation LRP1, putative, expressed
UniProt A0A1B6PID1
Pfam PF05142
Panther DB PTHR31604 PTHR31604:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G66350 : Lateral root primordium (LRP) protein-related
RAP-DB (Rice) LOC_Os08g43410.1 : LRP1, putative, expressed
MaizeGDB (Corn) Zm00025a044816 , Zm00025a047778 , Zm00025a005706 , Zm00025a034204 , Zm00025a014427
Brachypodium KQJ91165 , KQJ99272
Barley HORVU7Hr1G057230.2 , HORVU7Hr1G057230.3 , HORVU7Hr1G057230.1 , HORVU5Hr1G081450.3 , HORVU5Hr1G081450.2 , HORVU5Hr1G081450.1 , HORVU5Hr1G081450.7 , HORVU5Hr1G081450.6 , HORVU5Hr1G081450.5 , HORVU5Hr1G081450.4 , HORVU3Hr1G108950.10 , HORVU3Hr1G108950.11 , HORVU3Hr1G108950.4 , HORVU3Hr1G108950.6 , HORVU3Hr1G108950.7 , HORVU3Hr1G108950.1 , HORVU3Hr1G108950.2 , HORVU3Hr1G108950.3
Wheat TraesCS3D02G497300 , TraesCS3A02G491500 , TraesCS7A02G270900 , TraesCS5B02G319600 , TraesCS3B02G552400 , TraesCS7B02G169200 , TraesCS7D02G271400 , TraesCS5D02G325400 , TraesCS5A02G319200 , TraesCS5D02G325400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G355900 LTPL64 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
2 Sobic.008G012600 BTBA6 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain with Ankyrin repeat region, expressed K14508: regulatory protein NPR1
3 Sobic.001G341700 "GS3(Ortholog in rice:Mao et al., 2010(PubMedID : 31659843)@ Li et al., 2010)"(PubMedID : 32497208)@keratin-associated protein 5-4, putative, expressed -
4 Sobic.006G092300 ZOS4-06 - C2H2 zinc finger protein, expressed -
5 Sobic.001G159100 expressed protein -
6 Sobic.003G009800 expressed protein -
7 Sobic.003G382400 MLO domain containing protein, putative, expressed K08472: mlo protein
8 Sobic.010G049600 expressed protein -
9 Sobic.001G491400 cytochrome P450, putative, expressed -
10 Sobic.006G151800 OsRR5 type-A response regulator, expressed K14492: two-component response regulator ARR-A family
11 Sobic.001G266100 POEI14 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
12 Sobic.002G029700 DUF640 domain containing protein, putative, expressed -
13 Sobic.007G049100 expressed protein -
14 Sobic.003G011700 3-methyl-2-oxobutanoate hydroxymethyltransferase, putative, expressed K00606: 3-methyl-2-oxobutanoate hydroxymethyltransferase
15 Sobic.006G160800 YABBY domain containing protein, putative, expressed -
16 Sobic.005G218000 Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed -
17 Sobic.004G118100 harpin-induced protein 1 domain containing protein, expressed -
18 Sobic.005G200700 dirigent, putative, expressed -
19 Sobic.006G079500 AMP-binding domain containing protein, expressed -
20 Sobic.008G004200 MYB family transcription factor, putative, expressed -


Gene co-expression network
sample Sobic007G179000 Sobic007G179000 Sobic002G355900 Sobic002G355900 Sobic007G179000--Sobic002G355900 Sobic008G012600 Sobic008G012600 Sobic007G179000--Sobic008G012600 Sobic001G341700 Sobic001G341700 Sobic007G179000--Sobic001G341700 Sobic006G092300 Sobic006G092300 Sobic007G179000--Sobic006G092300 Sobic001G159100 Sobic001G159100 Sobic007G179000--Sobic001G159100 Sobic003G009800 Sobic003G009800 Sobic007G179000--Sobic003G009800 Sobic003G382400 Sobic003G382400 Sobic007G179000--Sobic003G382400 Sobic010G049600 Sobic010G049600 Sobic007G179000--Sobic010G049600 Sobic001G491400 Sobic001G491400 Sobic007G179000--Sobic001G491400 Sobic002G355900--Sobic003G009800 Sobic002G355900--Sobic001G159100 Sobic007G180700 Sobic007G180700 Sobic002G355900--Sobic007G180700 Sobic003G444400 Sobic003G444400 Sobic002G355900--Sobic003G444400 Sobic006G098300 Sobic006G098300 Sobic002G355900--Sobic006G098300 Sobic002G399600 Sobic002G399600 Sobic002G355900--Sobic002G399600 Sobic002G270400 Sobic002G270400 Sobic002G355900--Sobic002G270400 Sobic006G267400 Sobic006G267400 Sobic002G355900--Sobic006G267400 Sobic007G107500 Sobic007G107500 Sobic002G355900--Sobic007G107500 Sobic006G160800 Sobic006G160800 Sobic008G012600--Sobic006G160800 Sobic001G266100 Sobic001G266100 Sobic008G012600--Sobic001G266100 Sobic005G110900 Sobic005G110900 Sobic008G012600--Sobic005G110900 Sobic008G012600--Sobic010G049600 Sobic008G012600--Sobic001G491400 Sobic005G218000 Sobic005G218000 Sobic008G012600--Sobic005G218000 Sobic010G215700 Sobic010G215700 Sobic008G012600--Sobic010G215700 Sobic008G004200 Sobic008G004200 Sobic008G012600--Sobic008G004200 Sobic009G254500 Sobic009G254500 Sobic008G012600--Sobic009G254500 Sobic007G076100 Sobic007G076100 Sobic001G341700--Sobic007G076100 Sobic004G318800 Sobic004G318800 Sobic001G341700--Sobic004G318800 Sobic001G341700--Sobic005G218000 Sobic006G079500 Sobic006G079500 Sobic001G341700--Sobic006G079500 Sobic001G341700--Sobic006G092300 Sobic006G089700 Sobic006G089700 Sobic001G341700--Sobic006G089700 Sobic002G312200 Sobic002G312200 Sobic001G341700--Sobic002G312200 Sobic002G029700 Sobic002G029700 Sobic001G341700--Sobic002G029700 Sobic003G178500 Sobic003G178500 Sobic001G341700--Sobic003G178500 Sobic006G092300--Sobic006G079500 Sobic001G102600 Sobic001G102600 Sobic006G092300--Sobic001G102600 Sobic010G189366 Sobic010G189366 Sobic006G092300--Sobic010G189366 Sobic006G092300--Sobic010G215700 Sobic007G206000 Sobic007G206000 Sobic006G092300--Sobic007G206000 Sobic004G349150 Sobic004G349150 Sobic006G092300--Sobic004G349150 Sobic005G226500 Sobic005G226500 Sobic006G092300--Sobic005G226500 Sobic006G092300--Sobic001G491400 Sobic005G200700 Sobic005G200700 Sobic006G092300--Sobic005G200700 Sobic001G159100--Sobic002G355900 Sobic001G159100--Sobic003G009800 Sobic001G159100--Sobic006G267400 Sobic001G159100--Sobic007G180700 Sobic001G159100--Sobic004G349150 Sobic010G187400 Sobic010G187400 Sobic001G159100--Sobic010G187400 Sobic006G006900 Sobic006G006900 Sobic001G159100--Sobic006G006900 Sobic007G000600 Sobic007G000600 Sobic001G159100--Sobic007G000600 Sobic001G133200 Sobic001G133200 Sobic001G159100--Sobic001G133200 Sobic003G009800--Sobic002G355900 Sobic003G009800--Sobic001G159100 Sobic003G271700 Sobic003G271700 Sobic003G009800--Sobic003G271700 Sobic003G009800--Sobic007G206000 Sobic010G236000 Sobic010G236000 Sobic003G009800--Sobic010G236000 Sobic002G410600 Sobic002G410600 Sobic003G009800--Sobic002G410600 Sobic003G038700 Sobic003G038700 Sobic003G009800--Sobic003G038700 Sobic003G009800--Sobic007G180700 Sobic004G202800 Sobic004G202800 Sobic003G009800--Sobic004G202800 Sobic003G382400--Sobic001G266100 Sobic003G382400--Sobic005G110900 Sobic003G382400--Sobic005G218000 Sobic004G118100 Sobic004G118100 Sobic003G382400--Sobic004G118100 Sobic003G382400--Sobic010G049600 Sobic003G382400--Sobic001G491400 Sobic008G013400 Sobic008G013400 Sobic003G382400--Sobic008G013400 Sobic003G382400--Sobic008G012600 Sobic003G382400--Sobic006G160800 Sobic010G049600--Sobic001G491400 Sobic010G049600--Sobic005G200700 Sobic007G049100 Sobic007G049100 Sobic010G049600--Sobic007G049100 Sobic010G049600--Sobic001G266100 Sobic010G049600--Sobic002G399600 Sobic001G334501 Sobic001G334501 Sobic010G049600--Sobic001G334501 Sobic010G049600--Sobic005G226500 Sobic010G049600--Sobic007G107500 Sobic010G049600--Sobic002G270400 Sobic001G491400--Sobic010G049600 Sobic001G491400--Sobic005G200700 Sobic001G491400--Sobic002G399600 Sobic001G491400--Sobic007G049100 Sobic001G491400--Sobic001G334501 Sobic001G491400--Sobic005G226500 Sobic001G491400--Sobic002G270400 Sobic001G491400--Sobic007G107500 Sobic007G037400 Sobic007G037400 Sobic001G491400--Sobic007G037400
Octagon: transcription factors


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