Gene annotation
Transcriptome id Sobic.003G444400.1
Synonym EXPA16, ATEXPA16, ATEXP16, Sb03g047390, EXP16, ATHEXPALPHA1.7
Functional annotation expansin precursor, putative, expressed
UniProt C5XJE6
Pfam PF03330 PF01357
Panther DB PTHR31867 PTHR31867:SF29
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G55500 : expansin A16
RAP-DB (Rice) LOC_Os03g60720.1 : expansin precursor, putative, expressed
MaizeGDB (Corn) Zm00025a023911 , Zm00025a027043 , Zm00025a043994 , Zm00025a008818 , Zm00025a024073 , Zm00025a019850 , Zm00025a019851 , Zm00025a019852 , Zm00025a019849 , Zm00025a016421 , Zm00025a053441
Brachypodium KQK05753 , KQK12421 , PNT66309
Barley HORVU3Hr1G076670.2 , HORVU1Hr1G069830.2 , HORVU1Hr1G069830.1 , HORVU1Hr1G069830.7 , HORVU1Hr1G069830.6 , HORVU1Hr1G069830.4 , HORVU3Hr1G034030.4 , HORVU3Hr1G076640.2 , HORVU3Hr1G076640.3 , HORVU3Hr1G076640.1 , HORVU3Hr1G076640.4 , HORVU5Hr1G113580.5 , HORVU5Hr1G113580.4 , HORVU2Hr1G093690.1 , HORVU2Hr1G093690.2 , HORVU3Hr1G076670.1 , HORVU5Hr1G113580.6 , HORVU5Hr1G113580.3 , HORVU5Hr1G113580.2 , HORVU3Hr1G034030.3 , HORVU3Hr1G034030.2 , HORVU3Hr1G034030.1
Wheat TraesCS3B02G348000 , TraesCS3D02G313200 , TraesCS2A02G393700 , TraesCS3D02G313400 , TraesCS5D02G494800 , TraesCS5A02G481200 , TraesCS1D02G299700 , TraesCS1A02G300200 , TraesCS1A02G300200 , TraesCS2B02G411700 , TraesCS3A02G317900 , TraesCS1B02G310300 , TraesCS3D02G175800 , TraesCS7B02G293800 , TraesCS6B02G336500 , TraesCS7D02G387400 , TraesCS7D02G387400 , TraesCS5B02G494400 , TraesCS3B02G199900 , TraesCS3A02G165900 , TraesCS3D02G176000 , TraesCS3B02G200100 , TraesCS3D02G313300 , TraesCS3A02G165600 , TraesCS2D02G391600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G355900 LTPL64 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
2 Sobic.003G009800 expressed protein -
3 Sobic.001G159100 expressed protein -
4 Sobic.007G180700 LTPL44 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
5 Sobic.002G165500 LTPL4 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
6 Sobic.003G004900 AMP-binding domain containing protein, expressed K01904: 4-coumarate--CoA ligase
7 Sobic.005G054800 glyoxal oxidase-related, putative, expressed -
8 Sobic.006G137000 protein phosphatase 2C, putative, expressed K17499: PPM1G, protein phosphatase 1G
9 Sobic.006G267400 CRP2 - Cysteine-rich family protein precursor, expressed -
10 Sobic.007G179000 LRP1, putative, expressed -
11 Sobic.001G491400 cytochrome P450, putative, expressed -
12 Sobic.001G366000 LTPL1 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
13 Sobic.005G200700 dirigent, putative, expressed -
14 Sobic.006G098300 alpha/beta hydrolase fold, putative, expressed -
15 Sobic.002G399600 LTPL2 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
16 Sobic.001G334501 - K03921: FAB2, SSI2, acyl-[acyl-carrier-protein] desaturase
17 Sobic.010G049600 expressed protein -
18 Sobic.007G000600 CRP2 - Cysteine-rich family protein precursor, expressed -
19 Sobic.002G270400 LTPL45 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
20 Sobic.007G107500 LTPL4 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -


Gene co-expression network
sample Sobic003G444400 Sobic003G444400 Sobic002G355900 Sobic002G355900 Sobic003G444400--Sobic002G355900 Sobic003G009800 Sobic003G009800 Sobic003G444400--Sobic003G009800 Sobic001G159100 Sobic001G159100 Sobic003G444400--Sobic001G159100 Sobic007G180700 Sobic007G180700 Sobic003G444400--Sobic007G180700 Sobic002G165500 Sobic002G165500 Sobic003G444400--Sobic002G165500 Sobic003G004900 Sobic003G004900 Sobic003G444400--Sobic003G004900 Sobic005G054800 Sobic005G054800 Sobic003G444400--Sobic005G054800 Sobic006G137000 Sobic006G137000 Sobic003G444400--Sobic006G137000 Sobic006G267400 Sobic006G267400 Sobic003G444400--Sobic006G267400 Sobic002G355900--Sobic003G009800 Sobic002G355900--Sobic001G159100 Sobic002G355900--Sobic007G180700 Sobic002G355900--Sobic003G444400 Sobic006G098300 Sobic006G098300 Sobic002G355900--Sobic006G098300 Sobic002G399600 Sobic002G399600 Sobic002G355900--Sobic002G399600 Sobic002G270400 Sobic002G270400 Sobic002G355900--Sobic002G270400 Sobic002G355900--Sobic006G267400 Sobic007G107500 Sobic007G107500 Sobic002G355900--Sobic007G107500 Sobic003G009800--Sobic002G355900 Sobic003G009800--Sobic001G159100 Sobic003G271700 Sobic003G271700 Sobic003G009800--Sobic003G271700 Sobic007G206000 Sobic007G206000 Sobic003G009800--Sobic007G206000 Sobic010G236000 Sobic010G236000 Sobic003G009800--Sobic010G236000 Sobic002G410600 Sobic002G410600 Sobic003G009800--Sobic002G410600 Sobic003G038700 Sobic003G038700 Sobic003G009800--Sobic003G038700 Sobic003G009800--Sobic007G180700 Sobic004G202800 Sobic004G202800 Sobic003G009800--Sobic004G202800 Sobic001G159100--Sobic002G355900 Sobic001G159100--Sobic003G009800 Sobic001G159100--Sobic006G267400 Sobic001G159100--Sobic007G180700 Sobic004G349150 Sobic004G349150 Sobic001G159100--Sobic004G349150 Sobic010G187400 Sobic010G187400 Sobic001G159100--Sobic010G187400 Sobic006G006900 Sobic006G006900 Sobic001G159100--Sobic006G006900 Sobic007G000600 Sobic007G000600 Sobic001G159100--Sobic007G000600 Sobic001G133200 Sobic001G133200 Sobic001G159100--Sobic001G133200 Sobic007G180700--Sobic006G267400 Sobic007G180700--Sobic006G098300 Sobic007G180700--Sobic003G004900 Sobic007G180700--Sobic002G270400 Sobic007G180700--Sobic002G399600 Sobic004G001700 Sobic004G001700 Sobic007G180700--Sobic004G001700 Sobic002G173300 Sobic002G173300 Sobic007G180700--Sobic002G173300 Sobic007G180700--Sobic010G187400 Sobic007G180700--Sobic007G107500 Sobic001G366000 Sobic001G366000 Sobic002G165500--Sobic001G366000 Sobic002G165500--Sobic007G180700 Sobic002G165500--Sobic007G000600 Sobic002G165500--Sobic006G098300 Sobic007G029900 Sobic007G029900 Sobic002G165500--Sobic007G029900 Sobic005G200700 Sobic005G200700 Sobic002G165500--Sobic005G200700 Sobic002G165500--Sobic006G267400 Sobic002G165500--Sobic002G399600 Sobic002G165500--Sobic002G270400 Sobic003G004900--Sobic007G180700 Sobic003G004900--Sobic006G267400 Sobic001G102600 Sobic001G102600 Sobic003G004900--Sobic001G102600 Sobic010G189366 Sobic010G189366 Sobic003G004900--Sobic010G189366 Sobic003G004900--Sobic002G173300 Sobic003G004900--Sobic004G349150 Sobic003G004900--Sobic004G001700 Sobic003G004900--Sobic006G098300 Sobic003G004900--Sobic006G137000 Sobic005G054800--Sobic006G137000 Sobic005G054800--Sobic007G180700 Sobic005G054800--Sobic006G098300 Sobic005G054800--Sobic007G029900 Sobic005G054800--Sobic002G165500 Sobic005G054800--Sobic006G267400 Sobic005G010600 Sobic005G010600 Sobic005G054800--Sobic005G010600 Sobic005G054800--Sobic003G004900 Sobic005G054800--Sobic002G173300 Sobic006G137000--Sobic006G267400 Sobic006G137000--Sobic003G004900 Sobic006G137000--Sobic005G054800 Sobic006G137000--Sobic001G102600 Sobic006G137000--Sobic007G180700 Sobic006G137000--Sobic006G098300 Sobic006G137000--Sobic010G189366 Sobic006G137000--Sobic004G349150 Sobic006G137000--Sobic002G173300 Sobic006G267400--Sobic006G098300 Sobic006G267400--Sobic007G180700 Sobic006G267400--Sobic002G270400 Sobic006G267400--Sobic004G349150 Sobic006G267400--Sobic002G399600 Sobic006G267400--Sobic010G187400 Sobic006G267400--Sobic004G001700 Sobic006G267400--Sobic006G006900 Sobic008G032400 Sobic008G032400 Sobic006G267400--Sobic008G032400
Octagon: transcription factors


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