Gene annotation
Transcriptome id Sobic.002G122900.1
Synonym Sb02g010630
Functional annotation lysine ketoglutarate reductase trans-splicing related 1, putative, expressed
UniProt C5X530
Pfam PF05212
Panther DB PTHR31210 PTHR31210:SF9
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G18530 : Protein of unknown function (DUF707)
RAP-DB (Rice) LOC_Os01g69050.1 : lysine ketoglutarate reductase trans-splicing related 1, putative, expressed
MaizeGDB (Corn) Zm00025a013175 , Zm00025a039327
Brachypodium KQK11229 , KQK11228 , KQK16447
Barley HORVU3Hr1G093980.4 , HORVU3Hr1G093980.5 , HORVU3Hr1G093980.6 , HORVU3Hr1G093980.7 , HORVU3Hr1G093980.1 , HORVU3Hr1G093980.2 , HORVU3Hr1G093980.3 , HORVU3Hr1G093980.9 , HORVU3Hr1G093980.14 , HORVU3Hr1G093980.12 , HORVU3Hr1G093980.13 , HORVU3Hr1G093980.10 , HORVU3Hr1G093980.11 , HORVU4Hr1G015150.2 , HORVU4Hr1G015150.1 , HORVU3Hr1G093980.8
Wheat TraesCS3A02G426500 , TraesCS3A02G426500 , TraesCS6B02G377100 , TraesCS3B02G462700 , TraesCS3D02G421300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G057300 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@leucoanthocyanidin dioxygenase, putative, expressed -
2 Sobic.009G080233 - -
3 Sobic.006G246800 MBTB56 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
4 Sobic.006G035950 - -
5 Sobic.004G355101 - -
6 Sobic.003G014832 - -
7 Sobic.001G285700 expressed protein -
8 Sobic.004G342700 C2 domain containing protein, putative, expressed -
9 Sobic.008G176401 - -
10 Sobic.001G121000 - -
11 Sobic.010G228300 expressed protein -
12 Sobic.002G268450 - -
13 Sobic.003G372750 - K14565: nucleolar protein 58
14 Sobic.009G174200 S-domain receptor-like protein kinase, putative, expressed -
15 Sobic.004G087750 - -
16 Sobic.002G226600 - -
17 Sobic.007G095850 - -
18 Sobic.010G238500 - -
19 Sobic.007G215300 expressed protein -
20 Sobic.009G142700 - -


Gene co-expression network
sample Sobic002G122900 Sobic002G122900 Sobic006G057300 Sobic006G057300 Sobic002G122900--Sobic006G057300 Sobic009G080233 Sobic009G080233 Sobic002G122900--Sobic009G080233 Sobic006G246800 Sobic006G246800 Sobic002G122900--Sobic006G246800 Sobic006G035950 Sobic006G035950 Sobic002G122900--Sobic006G035950 Sobic004G355101 Sobic004G355101 Sobic002G122900--Sobic004G355101 Sobic003G014832 Sobic003G014832 Sobic002G122900--Sobic003G014832 Sobic001G285700 Sobic001G285700 Sobic002G122900--Sobic001G285700 Sobic004G342700 Sobic004G342700 Sobic002G122900--Sobic004G342700 Sobic008G176401 Sobic008G176401 Sobic002G122900--Sobic008G176401 Sobic006G057300--Sobic002G122900 Sobic004G101100 Sobic004G101100 Sobic006G057300--Sobic004G101100 Sobic006G057300--Sobic001G285700 Sobic006G057300--Sobic006G035950 Sobic001G121000 Sobic001G121000 Sobic006G057300--Sobic001G121000 Sobic006G057300--Sobic006G246800 Sobic006G057300--Sobic004G355101 Sobic010G228300 Sobic010G228300 Sobic006G057300--Sobic010G228300 Sobic007G215300 Sobic007G215300 Sobic006G057300--Sobic007G215300 Sobic004G087750 Sobic004G087750 Sobic009G080233--Sobic004G087750 Sobic009G174200 Sobic009G174200 Sobic009G080233--Sobic009G174200 Sobic008G098032 Sobic008G098032 Sobic009G080233--Sobic008G098032 Sobic004G139800 Sobic004G139800 Sobic009G080233--Sobic004G139800 Sobic004G019250 Sobic004G019250 Sobic009G080233--Sobic004G019250 Sobic005G035850 Sobic005G035850 Sobic009G080233--Sobic005G035850 Sobic009G080233--Sobic008G176401 Sobic001G310133 Sobic001G310133 Sobic009G080233--Sobic001G310133 Sobic009G080233--Sobic004G342700 Sobic006G246800--Sobic004G355101 Sobic006G246800--Sobic006G035950 Sobic006G246800--Sobic004G342700 Sobic006G246800--Sobic008G176401 Sobic006G246800--Sobic001G121000 Sobic006G246800--Sobic003G014832 Sobic002G268450 Sobic002G268450 Sobic006G246800--Sobic002G268450 Sobic006G246800--Sobic001G285700 Sobic006G246800--Sobic010G228300 Sobic006G035950--Sobic006G246800 Sobic006G035950--Sobic001G285700 Sobic006G035950--Sobic004G355101 Sobic006G035950--Sobic004G342700 Sobic006G035950--Sobic008G176401 Sobic006G035950--Sobic001G121000 Sobic006G035950--Sobic003G014832 Sobic006G035950--Sobic002G268450 Sobic006G035950--Sobic010G228300 Sobic004G355101--Sobic006G246800 Sobic004G355101--Sobic006G035950 Sobic004G355101--Sobic004G342700 Sobic004G355101--Sobic008G176401 Sobic004G355101--Sobic001G121000 Sobic004G355101--Sobic003G014832 Sobic004G355101--Sobic002G268450 Sobic004G355101--Sobic001G285700 Sobic004G355101--Sobic010G228300 Sobic003G014832--Sobic004G342700 Sobic003G014832--Sobic008G176401 Sobic003G014832--Sobic006G246800 Sobic003G014832--Sobic004G355101 Sobic003G014832--Sobic009G174200 Sobic003G014832--Sobic004G087750 Sobic003G014832--Sobic006G035950 Sobic003G014832--Sobic002G268450 Sobic003G014832--Sobic004G019250 Sobic001G285700--Sobic006G035950 Sobic001G285700--Sobic001G121000 Sobic001G285700--Sobic006G246800 Sobic001G285700--Sobic004G355101 Sobic001G285700--Sobic010G228300 Sobic001G285700--Sobic007G215300 Sobic007G095850 Sobic007G095850 Sobic001G285700--Sobic007G095850 Sobic009G142700 Sobic009G142700 Sobic001G285700--Sobic009G142700 Sobic001G285700--Sobic002G268450 Sobic004G342700--Sobic008G176401 Sobic004G342700--Sobic006G246800 Sobic004G342700--Sobic009G174200 Sobic004G342700--Sobic004G087750 Sobic004G342700--Sobic003G014832 Sobic004G342700--Sobic004G355101 Sobic004G342700--Sobic006G035950 Sobic004G342700--Sobic004G019250 Sobic004G342700--Sobic002G268450 Sobic008G176401--Sobic004G342700 Sobic008G176401--Sobic009G174200 Sobic008G176401--Sobic004G087750 Sobic008G176401--Sobic003G014832 Sobic008G176401--Sobic006G246800 Sobic008G176401--Sobic002G268450 Sobic008G176401--Sobic004G355101 Sobic008G176401--Sobic006G035950 Sobic008G176401--Sobic004G019250
Octagon: transcription factors


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