Gene annotation
| Transcriptome id | Sobic.002G239450.1 |
|---|---|
| Synonym | - |
| Functional annotation | - |
| UniProt | C5X3Q8 |
| Pfam | PF08268 PF12937 |
| Panther DB | PTHR31790 PTHR31790:SF22 |
| NCBI CDD | - |
| KEGG Orthology | - |
| Gene Ontology | GO:0005515; protein binding |
Orthologs (automatic annotation)
| TAIR | AT3G08750 : F-box and associated interaction domains-containing protein |
|---|---|
| RAP-DB (Rice) | LOC_Os09g34200.1 : OsFBX338 - F-box domain containing protein, expressed |
| MaizeGDB (Corn) | - |
| Brachypodium | KQJ85761 , KQJ90667 |
| Barley | - |
| Wheat | TraesCS5A02G254200 , TraesCS5A02G254200 , TraesCS5D02G261900 , TraesCS5B02G253100 , TraesCS5D02G261600 , TraesCS5D02G261600 , TraesCS5D02G261600 , TraesCS5D02G261600 , TraesCS5D02G261900 , TraesCS5D02G261900 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.002G090100 | - | - |
| 2 | Sobic.002G090100 | - | - |
| 3 | Sobic.002G090100 | - | - |
| 4 | Sobic.002G090100 | - | - |
| 5 | Sobic.002G090100 | - | - |
| 6 | Sobic.002G090100 | - | - |
| 7 | Sobic.001G381400 | expressed protein | - |
| 8 | Sobic.008G079500 | glutathione S-transferase, putative, expressed | K00799: GST, glutathione S-transferase |
| 9 | Sobic.001G327500 | uridine 5-monophosphate synthase, putative, expressed | K13421: uridine monophosphate synthetase |
| 10 | Sobic.007G159100 | expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@tetraspanin family protein, putative, expressed | - |
| 11 | Sobic.004G165800 | zinc finger family protein, putative, expressed | - |
| 12 | Sobic.002G102132 | - | - |
| 13 | Sobic.004G094900 | expressed protein | - |
| 14 | Sobic.002G390000 | dirigent, putative, expressed | - |
| 15 | Sobic.005G171001 | - | - |
| 16 | Sobic.004G263100 | Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed | K13993: HSP20 family protein |
| 17 | Sobic.004G135000 | - | - |
| 18 | Sobic.007G100032 | - | - |
| 19 | Sobic.001G065900 | "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed | K00799: GST, glutathione S-transferase |
| 20 | Sobic.001G249266 | - | - |
Gene co-expression network
Octagon: transcription factors
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