Gene annotation
Transcriptome id Sobic.002G304200.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6QE95
Pfam -
Panther DB PTHR32212 PTHR32212:SF140
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G26922 : F-box/RNI-like superfamily protein
RAP-DB (Rice) LOC_Os07g12560.1 : OsFBX224 - F-box domain containing protein, expressed
MaizeGDB (Corn) Zm00025a014641
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G106550 - -
2 Sobic.007G078400 transketolase, chloroplast precursor, putative, expressed -
3 Sobic.002G218350 - -
4 Sobic.010G158300 zinc finger, C3HC4 type domain containing protein, expressed -
5 Sobic.006G190950 - K10706: SETX, senataxin
6 Sobic.009G067700 ZOS1-19 - C2H2 zinc finger protein, expressed -
7 Sobic.002G026600 OsMADS90 - MADS-box family gene with M-beta type-box, expressed -
8 Sobic.001G338200 RNA-directed DNA polymerase, putative, expressed -
9 Sobic.010G090550 - -
10 Sobic.009G219601 - -
11 Sobic.003G197700 OsFBX12 - F-box domain containing protein, expressed -
12 Sobic.005G181400 - -
13 Sobic.004G080350 - -
14 Sobic.003G035266 - -
15 Sobic.001G018700 RD26, putative, expressed -
16 Sobic.001G018700 RD26, putative, expressed -
17 Sobic.001G018700 RD26, putative, expressed -
18 Sobic.001G018700 RD26, putative, expressed -
19 Sobic.001G018700 RD26, putative, expressed -
20 Sobic.001G018700 RD26, putative, expressed -


Gene co-expression network
sample Sobic002G304200 Sobic002G304200 Sobic008G106550 Sobic008G106550 Sobic002G304200--Sobic008G106550 Sobic007G078400 Sobic007G078400 Sobic002G304200--Sobic007G078400 Sobic002G218350 Sobic002G218350 Sobic002G304200--Sobic002G218350 Sobic010G158300 Sobic010G158300 Sobic002G304200--Sobic010G158300 Sobic006G190950 Sobic006G190950 Sobic002G304200--Sobic006G190950 Sobic009G067700 Sobic009G067700 Sobic002G304200--Sobic009G067700 Sobic002G026600 Sobic002G026600 Sobic002G304200--Sobic002G026600 Sobic001G338200 Sobic001G338200 Sobic002G304200--Sobic001G338200 Sobic010G090550 Sobic010G090550 Sobic002G304200--Sobic010G090550 Sobic008G106550--Sobic006G190950 Sobic008G106550--Sobic009G067700 Sobic001G018700 Sobic001G018700 Sobic008G106550--Sobic001G018700 Sobic007G078400--Sobic002G218350 Sobic007G078400--Sobic010G158300 Sobic009G219601 Sobic009G219601 Sobic007G078400--Sobic009G219601 Sobic007G078400--Sobic001G018700 Sobic002G218350--Sobic010G158300 Sobic002G218350--Sobic007G078400 Sobic003G405400 Sobic003G405400 Sobic002G218350--Sobic003G405400 Sobic002G218350--Sobic001G018700 Sobic010G158300--Sobic002G218350 Sobic010G158300--Sobic007G078400 Sobic006G089200 Sobic006G089200 Sobic010G158300--Sobic006G089200 Sobic010G158300--Sobic001G018700 Sobic006G190950--Sobic008G106550 Sobic001G030800 Sobic001G030800 Sobic006G190950--Sobic001G030800 Sobic003G178101 Sobic003G178101 Sobic006G190950--Sobic003G178101 Sobic003G262000 Sobic003G262000 Sobic006G190950--Sobic003G262000 Sobic003G384650 Sobic003G384650 Sobic006G190950--Sobic003G384650 Sobic006G190950--Sobic001G018700 Sobic009G067700--Sobic008G106550 Sobic009G067700--Sobic001G018700 Sobic003G197700 Sobic003G197700 Sobic002G026600--Sobic003G197700 Sobic005G181400 Sobic005G181400 Sobic002G026600--Sobic005G181400 Sobic010G017600 Sobic010G017600 Sobic002G026600--Sobic010G017600 Sobic010G052450 Sobic010G052450 Sobic002G026600--Sobic010G052450 Sobic002G026600--Sobic008G106550 Sobic005G125100 Sobic005G125100 Sobic002G026600--Sobic005G125100 Sobic002G026600--Sobic002G304200 Sobic004G285300 Sobic004G285300 Sobic002G026600--Sobic004G285300 Sobic002G026600--Sobic006G190950 Sobic001G338200--Sobic010G090550 Sobic001G338200--Sobic001G018700 Sobic010G090550--Sobic001G338200 Sobic010G090550--Sobic001G018700
Octagon: transcription factors


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