Gene annotation
Transcriptome id Sobic.002G334300.1
Synonym CSLD2, ATCSLD2, Sb02g036020
Functional annotation CSLF9 - cellulose synthase-like family F
beta1,3
1,4 glucan synthase, expressed
UniProt A0A1B6QEW6
Pfam PF03552
Panther DB PTHR13301 PTHR13301:SF39
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016760; cellulose synthase (UDP-forming) activity GO:0016020membrane


Orthologs (automatic annotation)
TAIR AT5G16910 : cellulose-synthase like D2
RAP-DB (Rice) LOC_Os07g36610.1 : CSLF9 - cellulose synthase-like family F; beta1,3;1,4 glucan synthase, expressed
MaizeGDB (Corn) Zm00025a055112 , Zm00025a048344 , Zm00025a048342 , Zm00025a006226 , Zm00025a030058 , Zm00025a006857
Brachypodium KQJ95295 , KQK15829
Barley HORVU7Hr1G070010.5 , HORVU7Hr1G070010.4 , HORVU7Hr1G070010.1 , HORVU7Hr1G070010.3 , HORVU2Hr1G042310.4 , HORVU2Hr1G042310.2 , HORVU2Hr1G042310.3 , HORVU2Hr1G042310.1 , HORVU2Hr1G021450.2 , HORVU2Hr1G021450.3 , HORVU2Hr1G021450.6 , HORVU2Hr1G021450.4 , HORVU2Hr1G021450.5 , HORVU2Hr1G042300.5 , HORVU2Hr1G042300.4 , HORVU2Hr1G042300.7 , HORVU2Hr1G042300.6 , HORVU2Hr1G042300.1 , HORVU2Hr1G042300.3 , HORVU2Hr1G042300.2 , HORVU7Hr1G121040.6 , HORVU7Hr1G121040.5 , HORVU7Hr1G121040.4 , HORVU7Hr1G121040.3 , HORVU7Hr1G121040.2 , HORVU7Hr1G121040.1 , HORVU1Hr1G022900.2 , HORVU1Hr1G022900.3 , HORVU1Hr1G022900.1 , HORVU1Hr1G022900.6 , HORVU1Hr1G022900.7 , HORVU1Hr1G022900.4 , HORVU1Hr1G022900.5 , HORVU1Hr1G022900.8 , HORVU1Hr1G022900.9 , HORVU2Hr1G042240.4 , HORVU2Hr1G042240.5 , HORVU2Hr1G042240.1 , HORVU2Hr1G042240.2 , HORVU2Hr1G042240.3 , HORVU1Hr1G022900.10 , HORVU1Hr1G022900.11 , HORVU2Hr1G042250.9 , HORVU2Hr1G042250.3 , HORVU2Hr1G042250.2 , HORVU2Hr1G042250.1 , HORVU2Hr1G042250.7 , HORVU2Hr1G042250.6 , HORVU2Hr1G042250.4
Wheat TraesCS7D02G555000 , TraesCS2D02G217000 , TraesCS2D02G126100 , TraesCS2A02G210000 , TraesCS2D02G575900 , TraesCS2B02G236300 , TraesCSU02G003300 , TraesCS2B02G236200 , TraesCS2B02G236200 , TraesCS2B02G236500 , TraesCS2A02G210300 , TraesCS2B02G236400 , TraesCS5B02G495200 , TraesCS2A02G210400 , TraesCS1A02G099100 , TraesCS7A02G298600 , TraesCS7B02G480200 , TraesCS2D02G216800 , TraesCS5A02G482200 , TraesCS2B02G626300 , TraesCS2A02G122600 , TraesCS2A02G210100 , TraesCS2A02G565500 , TraesCS5D02G495800 , TraesCS1D02G107100 , TraesCS7D02G294300 , TraesCS7B02G188400 , TraesCS7B02G188400 , TraesCS7B02G188400 , TraesCS7B02G188400 , TraesCS2B02G144900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G153300 acyl-desaturase, chloroplast precursor, putative, expressed K03921: FAB2, SSI2, acyl-[acyl-carrier-protein] desaturase
2 Sobic.002G305400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytokinin-O-glucosyltransferase 2, putative, expressed -
3 Sobic.009G087900 transmembrane amino acid transporter protein, putative, expressed -
4 Sobic.002G334400 CSLF3 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed -
5 Sobic.003G206100 THION27 - Plant thionin family protein precursor, expressed -
6 Sobic.001G153800 Os10bglu34 - beta-glucosidase homologue, similar to Os3bglu6, expressed K01188: beta-glucosidase
7 Sobic.006G251301 - -
8 Sobic.001G359100 cytochrome P450, putative, expressed -
9 Sobic.003G070200 THION18 - Plant thionin family protein precursor, expressed -
10 Sobic.001G266500 LTPL37 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
11 Sobic.006G059400 - -
12 Sobic.008G189800 CHCH domain containing protein, expressed -
13 Sobic.010G005900 nodulin, putative, expressed -
14 Sobic.003G162500 expressed protein -
15 Sobic.004G090700 - -
16 Sobic.003G206200 THION27 - Plant thionin family protein precursor, expressed -
17 Sobic.004G159200 LEML2 - Anther-specific LEM1 family protein precursor, expressed -
18 Sobic.010G200900 GDSL-like lipase/acylhydrolase, putative, expressed -
19 Sobic.003G413400 LEML1 - Anther-specific LEM1 family protein precursor, expressed -
20 Sobic.003G062900 OsSCP1 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II


Gene co-expression network
sample Sobic002G334300 Sobic002G334300 Sobic004G153300 Sobic004G153300 Sobic002G334300--Sobic004G153300 Sobic002G305400 Sobic002G305400 Sobic002G334300--Sobic002G305400 Sobic009G087900 Sobic009G087900 Sobic002G334300--Sobic009G087900 Sobic002G334400 Sobic002G334400 Sobic002G334300--Sobic002G334400 Sobic003G206100 Sobic003G206100 Sobic002G334300--Sobic003G206100 Sobic001G153800 Sobic001G153800 Sobic002G334300--Sobic001G153800 Sobic006G251301 Sobic006G251301 Sobic002G334300--Sobic006G251301 Sobic001G359100 Sobic001G359100 Sobic002G334300--Sobic001G359100 Sobic003G070200 Sobic003G070200 Sobic002G334300--Sobic003G070200 Sobic001G266500 Sobic001G266500 Sobic004G153300--Sobic001G266500 Sobic007G064600 Sobic007G064600 Sobic004G153300--Sobic007G064600 Sobic003G206000 Sobic003G206000 Sobic004G153300--Sobic003G206000 Sobic003G239400 Sobic003G239400 Sobic004G153300--Sobic003G239400 Sobic002G129700 Sobic002G129700 Sobic004G153300--Sobic002G129700 Sobic001G332050 Sobic001G332050 Sobic004G153300--Sobic001G332050 Sobic002G305400--Sobic009G087900 Sobic002G305400--Sobic002G334400 Sobic002G305400--Sobic001G153800 Sobic002G305400--Sobic001G359100 Sobic002G305400--Sobic003G070200 Sobic006G059400 Sobic006G059400 Sobic002G305400--Sobic006G059400 Sobic010G005900 Sobic010G005900 Sobic002G305400--Sobic010G005900 Sobic002G305400--Sobic003G206100 Sobic002G305400--Sobic006G251301 Sobic009G087900--Sobic002G305400 Sobic009G087900--Sobic002G334400 Sobic009G087900--Sobic001G153800 Sobic009G087900--Sobic001G359100 Sobic009G087900--Sobic003G070200 Sobic009G087900--Sobic006G059400 Sobic009G087900--Sobic010G005900 Sobic009G087900--Sobic003G206100 Sobic002G260100 Sobic002G260100 Sobic009G087900--Sobic002G260100 Sobic002G334400--Sobic001G153800 Sobic002G334400--Sobic001G359100 Sobic002G334400--Sobic003G070200 Sobic002G334400--Sobic006G059400 Sobic002G334400--Sobic009G087900 Sobic002G334400--Sobic002G305400 Sobic002G334400--Sobic002G260100 Sobic003G062900 Sobic003G062900 Sobic002G334400--Sobic003G062900 Sobic002G334400--Sobic010G005900 Sobic003G206100--Sobic006G251301 Sobic008G189800 Sobic008G189800 Sobic003G206100--Sobic008G189800 Sobic003G162500 Sobic003G162500 Sobic003G206100--Sobic003G162500 Sobic004G090700 Sobic004G090700 Sobic003G206100--Sobic004G090700 Sobic003G206200 Sobic003G206200 Sobic003G206100--Sobic003G206200 Sobic004G159200 Sobic004G159200 Sobic003G206100--Sobic004G159200 Sobic003G413400 Sobic003G413400 Sobic003G206100--Sobic003G413400 Sobic008G138300 Sobic008G138300 Sobic003G206100--Sobic008G138300 Sobic002G129600 Sobic002G129600 Sobic003G206100--Sobic002G129600 Sobic001G153800--Sobic002G334400 Sobic001G153800--Sobic001G359100 Sobic001G153800--Sobic003G070200 Sobic001G153800--Sobic006G059400 Sobic001G153800--Sobic009G087900 Sobic001G153800--Sobic002G305400 Sobic001G153800--Sobic002G260100 Sobic001G153800--Sobic003G062900 Sobic001G153800--Sobic010G005900 Sobic006G251301--Sobic003G206100 Sobic006G251301--Sobic008G189800 Sobic006G251301--Sobic003G162500 Sobic006G251301--Sobic004G090700 Sobic006G251301--Sobic003G206200 Sobic006G251301--Sobic004G159200 Sobic006G251301--Sobic003G413400 Sobic007G073300 Sobic007G073300 Sobic006G251301--Sobic007G073300 Sobic006G251301--Sobic002G129600 Sobic001G359100--Sobic003G070200 Sobic001G359100--Sobic006G059400 Sobic001G359100--Sobic001G153800 Sobic001G359100--Sobic002G334400 Sobic001G359100--Sobic009G087900 Sobic001G359100--Sobic002G305400 Sobic001G359100--Sobic002G260100 Sobic001G359100--Sobic003G062900 Sobic001G359100--Sobic010G005900 Sobic003G070200--Sobic001G359100 Sobic003G070200--Sobic006G059400 Sobic003G070200--Sobic001G153800 Sobic003G070200--Sobic002G334400 Sobic003G070200--Sobic009G087900 Sobic003G070200--Sobic002G305400 Sobic003G070200--Sobic002G260100 Sobic003G070200--Sobic003G062900 Sobic003G070200--Sobic010G005900
Octagon: transcription factors


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