Gene annotation
| Transcriptome id | Sobic.003G100500.2 |
|---|---|
| Synonym | |
| Functional annotation | leucine rich repeat protein, putative, expressed |
| UniProt | A0A1B6Q2H0 |
| Pfam | PF13855 PF00560 |
| Panther DB | PTHR27004:SF12 PTHR27004 |
| NCBI CDD | KOG0472; Leucine-rich repeat protein |
| KEGG Orthology | - |
| Gene Ontology | GO:0005515; protein binding |
Orthologs (automatic annotation)
| TAIR | AT2G34930 : disease resistance family protein / LRR family protein |
|---|---|
| RAP-DB (Rice) | LOC_Os11g35490.1 : leucine rich repeat protein, putative, expressed |
| MaizeGDB (Corn) | - |
| Brachypodium | - |
| Barley | - |
| Wheat | TraesCS7A02G011600 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.006G026800 | inorganic phosphate transporter, putative, expressed | K08176: MFS transporter, PHS family, inorganic phosphate transporter |
| 2 | Sobic.004G071750 | - | - |
| 3 | Sobic.001G160700 | integral membrane protein DUF6 containing protein, expressed | - |
| 4 | Sobic.001G160700 | integral membrane protein DUF6 containing protein, expressed | - |
| 5 | Sobic.001G160700 | integral membrane protein DUF6 containing protein, expressed | - |
| 6 | Sobic.001G160700 | integral membrane protein DUF6 containing protein, expressed | - |
| 7 | Sobic.001G160700 | integral membrane protein DUF6 containing protein, expressed | - |
| 8 | Sobic.001G160700 | integral membrane protein DUF6 containing protein, expressed | - |
| 9 | Sobic.001G160700 | integral membrane protein DUF6 containing protein, expressed | - |
| 10 | Sobic.001G160700 | integral membrane protein DUF6 containing protein, expressed | - |
| 11 | Sobic.001G160700 | integral membrane protein DUF6 containing protein, expressed | - |
| 12 | Sobic.004G170100 | - | - |
| 13 | Sobic.008G117300 | Glutaredoxin family protein (At)(PubMedID : 27208977)@OsGrx_C12 - glutaredoxin subgroup III, expressed | K03676: grxC, GLRX, glutaredoxin 3 |
| 14 | Sobic.005G204000 | OsGrx_C17 - glutaredoxin subgroup III, expressed | K03676: grxC, GLRX, glutaredoxin 3 |
| 15 | Sobic.008G084501 | - | - |
| 16 | Sobic.009G165200 | plant-specific domain TIGR01589 family protein, expressed | - |
| 17 | Sobic.010G258200 | - | - |
| 18 | Sobic.002G145200 | - | - |
| 19 | Sobic.002G073350 | - | - |
| 20 | Sobic.003G279400 | chlorophyll A-B binding protein, putative, expressed | - |
Gene co-expression network
Octagon: transcription factors
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