Gene annotation
Transcriptome id Sobic.003G198000.2
Synonym Sb03g026060, FRS5
Functional annotation SWIM zinc finger family protein, putative, expressed
UniProt A0A1W0VY60
Pfam PF04434 PF03101 PF10551
Panther DB PTHR31669 PTHR31669:SF57
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008270; zinc ion binding GO:0006355regulation of transcription, DNA-templated


Orthologs (automatic annotation)
TAIR AT4G38180 : FAR1-related sequence 5
RAP-DB (Rice) LOC_Os06g13740.1 : transposon protein, putative, unclassified, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU5Hr1G049620.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G014300 - -
2 Sobic.001G261750 - -
3 Sobic.001G261750 - -
4 Sobic.001G261750 - -
5 Sobic.001G261750 - -
6 Sobic.001G261750 - -
7 Sobic.001G173000 terpene synthase, putative, expressed -
8 Sobic.004G247900 OsCML20 - Calmodulin-related calcium sensor protein, expressed -
9 Sobic.001G494600 expressed protein -
10 Sobic.008G077800 GDSL-like lipase/acylhydrolase, putative, expressed -
11 Sobic.002G093600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Jacalin-like lectin domain containing protein, putative, expressed -
12 Sobic.008G028533 - -
13 Sobic.008G145200 aspartic proteinase nepenthesin precursor, putative, expressed -
14 Sobic.006G007300 - -
15 Sobic.002G391700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxidase, putative, expressed K00430: peroxidase
16 Sobic.008G028566 - -
17 Sobic.002G224300 no apical meristem protein, putative, expressed -
18 Sobic.002G087500 - -
19 Sobic.002G298400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dehydrodolichyl diphosphate synthase, putative, expressed K11778: DHDDS, RER2, ditrans,polycis-polyprenyl diphosphate synthase
20 Sobic.004G293900 thioesterase family protein, putative, expressed -


Gene co-expression network
sample Sobic003G198000 Sobic003G198000 Sobic006G014300 Sobic006G014300 Sobic003G198000--Sobic006G014300 Sobic001G261750 Sobic001G261750 Sobic003G198000--Sobic001G261750 Sobic001G173000 Sobic001G173000 Sobic003G198000--Sobic001G173000 Sobic004G247900 Sobic004G247900 Sobic003G198000--Sobic004G247900 Sobic001G494600 Sobic001G494600 Sobic003G198000--Sobic001G494600 Sobic006G014300--Sobic003G198000 Sobic004G293900 Sobic004G293900 Sobic006G014300--Sobic004G293900 Sobic006G014300--Sobic004G247900 Sobic002G267100 Sobic002G267100 Sobic006G014300--Sobic002G267100 Sobic001G173100 Sobic001G173100 Sobic006G014300--Sobic001G173100 Sobic006G014300--Sobic001G173000 Sobic010G195800 Sobic010G195800 Sobic006G014300--Sobic010G195800 Sobic008G087300 Sobic008G087300 Sobic006G014300--Sobic008G087300 Sobic004G167000 Sobic004G167000 Sobic006G014300--Sobic004G167000 Sobic001G261750--Sobic001G261750 Sobic001G261750--Sobic001G494600 Sobic002G093600 Sobic002G093600 Sobic001G261750--Sobic002G093600 Sobic008G028533 Sobic008G028533 Sobic001G261750--Sobic008G028533 Sobic008G145200 Sobic008G145200 Sobic001G261750--Sobic008G145200 Sobic006G007300 Sobic006G007300 Sobic001G261750--Sobic006G007300 Sobic001G173000--Sobic003G198000 Sobic007G182900 Sobic007G182900 Sobic001G173000--Sobic007G182900 Sobic001G048600 Sobic001G048600 Sobic001G173000--Sobic001G048600 Sobic001G173000--Sobic006G014300 Sobic001G173000--Sobic001G261750 Sobic004G247900--Sobic002G267100 Sobic004G247900--Sobic004G293900 Sobic004G247900--Sobic003G198000 Sobic004G247900--Sobic006G014300 Sobic004G247400 Sobic004G247400 Sobic004G247900--Sobic004G247400 Sobic002G265133 Sobic002G265133 Sobic004G247900--Sobic002G265133 Sobic010G159500 Sobic010G159500 Sobic004G247900--Sobic010G159500 Sobic010G152900 Sobic010G152900 Sobic004G247900--Sobic010G152900 Sobic007G095000 Sobic007G095000 Sobic004G247900--Sobic007G095000 Sobic001G494600--Sobic001G261750 Sobic001G494600--Sobic002G093600 Sobic001G494600--Sobic008G028533 Sobic001G494600--Sobic008G145200 Sobic001G494600--Sobic006G007300
Octagon: transcription factors


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