Gene annotation
Transcriptome id Sobic.001G173000.1
Synonym Sb01g015070
Functional annotation terpene synthase, putative, expressed
UniProt A0A1Z5S649
Pfam PF01397 PF03936
Panther DB PTHR31225 PTHR31225:SF19
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016829; lyase activity GO:0010333terpene synthase activity GO:0008152metabolic process GO:0000287magnesium ion binding


Orthologs (automatic annotation)
TAIR AT4G20230 : Terpenoid cyclases/Protein prenyltransferases superfamily protein
RAP-DB (Rice) LOC_Os07g11790.1 : terpene synthase, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G198000 SWIM zinc finger family protein, putative, expressed -
2 Sobic.007G182900 helix-loop-helix DNA-binding domain containing protein, expressed -
3 Sobic.001G048600 pheophorbide a oxygenase, chloroplast precursor, putative, expressed -
4 Sobic.006G014300 - -
5 Sobic.001G261750 - -
6 Sobic.001G261750 - -
7 Sobic.001G261750 - -
8 Sobic.001G261750 - -
9 Sobic.001G261750 - -
10 Sobic.008G145200 aspartic proteinase nepenthesin precursor, putative, expressed -
11 Sobic.008G077800 GDSL-like lipase/acylhydrolase, putative, expressed -
12 Sobic.002G093600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Jacalin-like lectin domain containing protein, putative, expressed -
13 Sobic.001G494600 expressed protein -
14 Sobic.006G007300 - -
15 Sobic.008G028533 - -
16 Sobic.002G224300 no apical meristem protein, putative, expressed -
17 Sobic.005G021950 - -
18 Sobic.008G028566 - -
19 Sobic.002G298400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dehydrodolichyl diphosphate synthase, putative, expressed K11778: DHDDS, RER2, ditrans,polycis-polyprenyl diphosphate synthase
20 Sobic.002G391700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxidase, putative, expressed K00430: peroxidase


Gene co-expression network
sample Sobic001G173000 Sobic001G173000 Sobic003G198000 Sobic003G198000 Sobic001G173000--Sobic003G198000 Sobic007G182900 Sobic007G182900 Sobic001G173000--Sobic007G182900 Sobic001G048600 Sobic001G048600 Sobic001G173000--Sobic001G048600 Sobic006G014300 Sobic006G014300 Sobic001G173000--Sobic006G014300 Sobic001G261750 Sobic001G261750 Sobic001G173000--Sobic001G261750 Sobic003G198000--Sobic006G014300 Sobic003G198000--Sobic001G261750 Sobic003G198000--Sobic001G173000 Sobic004G247900 Sobic004G247900 Sobic003G198000--Sobic004G247900 Sobic001G494600 Sobic001G494600 Sobic003G198000--Sobic001G494600 Sobic007G182900--Sobic001G173000 Sobic007G182900--Sobic001G048600 Sobic010G080750 Sobic010G080750 Sobic007G182900--Sobic010G080750 Sobic002G126000 Sobic002G126000 Sobic007G182900--Sobic002G126000 Sobic006G142266 Sobic006G142266 Sobic007G182900--Sobic006G142266 Sobic007G182900--Sobic003G198000 Sobic004G247400 Sobic004G247400 Sobic007G182900--Sobic004G247400 Sobic002G115100 Sobic002G115100 Sobic007G182900--Sobic002G115100 Sobic003G104500 Sobic003G104500 Sobic007G182900--Sobic003G104500 Sobic002G371900 Sobic002G371900 Sobic001G048600--Sobic002G371900 Sobic003G392700 Sobic003G392700 Sobic001G048600--Sobic003G392700 Sobic001G048600--Sobic002G126000 Sobic002G001800 Sobic002G001800 Sobic001G048600--Sobic002G001800 Sobic001G019300 Sobic001G019300 Sobic001G048600--Sobic001G019300 Sobic005G190900 Sobic005G190900 Sobic001G048600--Sobic005G190900 Sobic002G281000 Sobic002G281000 Sobic001G048600--Sobic002G281000 Sobic008G073400 Sobic008G073400 Sobic001G048600--Sobic008G073400 Sobic003G106500 Sobic003G106500 Sobic001G048600--Sobic003G106500 Sobic006G014300--Sobic003G198000 Sobic004G293900 Sobic004G293900 Sobic006G014300--Sobic004G293900 Sobic006G014300--Sobic004G247900 Sobic002G267100 Sobic002G267100 Sobic006G014300--Sobic002G267100 Sobic001G173100 Sobic001G173100 Sobic006G014300--Sobic001G173100 Sobic006G014300--Sobic001G173000 Sobic010G195800 Sobic010G195800 Sobic006G014300--Sobic010G195800 Sobic008G087300 Sobic008G087300 Sobic006G014300--Sobic008G087300 Sobic004G167000 Sobic004G167000 Sobic006G014300--Sobic004G167000 Sobic001G261750--Sobic001G261750 Sobic001G261750--Sobic001G494600 Sobic002G093600 Sobic002G093600 Sobic001G261750--Sobic002G093600 Sobic008G028533 Sobic008G028533 Sobic001G261750--Sobic008G028533 Sobic008G145200 Sobic008G145200 Sobic001G261750--Sobic008G145200 Sobic006G007300 Sobic006G007300 Sobic001G261750--Sobic006G007300
Octagon: transcription factors


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