Gene annotation
Transcriptome id Sobic.007G182900.1
Synonym Sb07g025310
Functional annotation helix-loop-helix DNA-binding domain containing protein, expressed
UniProt A0A1B6PIG0
Pfam PF00010
Panther DB PTHR11514 PTHR11514:SF55
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G46760 : Basic helix-loop-helix (bHLH) DNA-binding family protein
RAP-DB (Rice) LOC_Os09g34330.1 : helix-loop-helix DNA-binding domain containing protein, expressed
MaizeGDB (Corn) Zm00025a005355
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G173000 terpene synthase, putative, expressed -
2 Sobic.001G048600 pheophorbide a oxygenase, chloroplast precursor, putative, expressed -
3 Sobic.010G080750 - -
4 Sobic.002G126000 kinesin-like protein, identical, putative, expressed -
5 Sobic.006G142266 - -
6 Sobic.003G198000 SWIM zinc finger family protein, putative, expressed -
7 Sobic.004G247400 caleosin related protein, putative, expressed K17991: peroxygenase
8 Sobic.002G115100 - -
9 Sobic.003G104500 isoflavone reductase, putative, expressed -
10 Sobic.002G203800 pleiotropic drug resistance protein, putative, expressed -
11 Sobic.003G392700 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
12 Sobic.004G247900 OsCML20 - Calmodulin-related calcium sensor protein, expressed -
13 Sobic.004G131600 plasma membrane ATPase, putative, expressed -
14 Sobic.005G190900 MBTB64 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
15 Sobic.010G107400 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
16 Sobic.009G254200 pentatricopeptide, putative, expressed -
17 Sobic.005G097800 eukaryotic aspartyl protease domain containing protein, expressed -
18 Sobic.006G014300 - -
19 Sobic.006G247300 AMP-binding enzyme, putative, expressed K01897: ACSL, long-chain acyl-CoA synthetase
20 Sobic.003G158900 poly synthetase 2-A, putative, expressed K10798: poly [ADP-ribose] polymerase 2/3/4


Gene co-expression network
sample Sobic007G182900 Sobic007G182900 Sobic001G173000 Sobic001G173000 Sobic007G182900--Sobic001G173000 Sobic001G048600 Sobic001G048600 Sobic007G182900--Sobic001G048600 Sobic010G080750 Sobic010G080750 Sobic007G182900--Sobic010G080750 Sobic002G126000 Sobic002G126000 Sobic007G182900--Sobic002G126000 Sobic006G142266 Sobic006G142266 Sobic007G182900--Sobic006G142266 Sobic003G198000 Sobic003G198000 Sobic007G182900--Sobic003G198000 Sobic004G247400 Sobic004G247400 Sobic007G182900--Sobic004G247400 Sobic002G115100 Sobic002G115100 Sobic007G182900--Sobic002G115100 Sobic003G104500 Sobic003G104500 Sobic007G182900--Sobic003G104500 Sobic001G173000--Sobic003G198000 Sobic001G173000--Sobic007G182900 Sobic001G173000--Sobic001G048600 Sobic006G014300 Sobic006G014300 Sobic001G173000--Sobic006G014300 Sobic001G261750 Sobic001G261750 Sobic001G173000--Sobic001G261750 Sobic002G371900 Sobic002G371900 Sobic001G048600--Sobic002G371900 Sobic003G392700 Sobic003G392700 Sobic001G048600--Sobic003G392700 Sobic001G048600--Sobic002G126000 Sobic002G001800 Sobic002G001800 Sobic001G048600--Sobic002G001800 Sobic001G019300 Sobic001G019300 Sobic001G048600--Sobic001G019300 Sobic005G190900 Sobic005G190900 Sobic001G048600--Sobic005G190900 Sobic002G281000 Sobic002G281000 Sobic001G048600--Sobic002G281000 Sobic008G073400 Sobic008G073400 Sobic001G048600--Sobic008G073400 Sobic003G106500 Sobic003G106500 Sobic001G048600--Sobic003G106500 Sobic005G044700 Sobic005G044700 Sobic010G080750--Sobic005G044700 Sobic010G080750--Sobic007G182900 Sobic010G231050 Sobic010G231050 Sobic010G080750--Sobic010G231050 Sobic010G107400 Sobic010G107400 Sobic010G080750--Sobic010G107400 Sobic002G363200 Sobic002G363200 Sobic010G080750--Sobic002G363200 Sobic002G103200 Sobic002G103200 Sobic010G080750--Sobic002G103200 Sobic002G016700 Sobic002G016700 Sobic010G080750--Sobic002G016700 Sobic010G080750--Sobic006G014300 Sobic009G093400 Sobic009G093400 Sobic010G080750--Sobic009G093400 Sobic001G145050 Sobic001G145050 Sobic002G126000--Sobic001G145050 Sobic004G063200 Sobic004G063200 Sobic002G126000--Sobic004G063200 Sobic001G198700 Sobic001G198700 Sobic002G126000--Sobic001G198700 Sobic001G404500 Sobic001G404500 Sobic002G126000--Sobic001G404500 Sobic003G402200 Sobic003G402200 Sobic002G126000--Sobic003G402200 Sobic002G041800 Sobic002G041800 Sobic002G126000--Sobic002G041800 Sobic002G366100 Sobic002G366100 Sobic002G126000--Sobic002G366100 Sobic009G189000 Sobic009G189000 Sobic002G126000--Sobic009G189000 Sobic006G060800 Sobic006G060800 Sobic002G126000--Sobic006G060800 Sobic006G142266--Sobic002G126000 Sobic002G188350 Sobic002G188350 Sobic006G142266--Sobic002G188350 Sobic009G013300 Sobic009G013300 Sobic006G142266--Sobic009G013300 Sobic010G004701 Sobic010G004701 Sobic006G142266--Sobic010G004701 Sobic010G004600 Sobic010G004600 Sobic006G142266--Sobic010G004600 Sobic002G066901 Sobic002G066901 Sobic006G142266--Sobic002G066901 Sobic003G208300 Sobic003G208300 Sobic006G142266--Sobic003G208300 Sobic004G078600 Sobic004G078600 Sobic006G142266--Sobic004G078600 Sobic003G096500 Sobic003G096500 Sobic006G142266--Sobic003G096500 Sobic003G198000--Sobic006G014300 Sobic003G198000--Sobic001G261750 Sobic003G198000--Sobic001G173000 Sobic004G247900 Sobic004G247900 Sobic003G198000--Sobic004G247900 Sobic001G494600 Sobic001G494600 Sobic003G198000--Sobic001G494600 Sobic005G129000 Sobic005G129000 Sobic004G247400--Sobic005G129000 Sobic004G247400--Sobic004G247900 Sobic004G191500 Sobic004G191500 Sobic004G247400--Sobic004G191500 Sobic003G388400 Sobic003G388400 Sobic004G247400--Sobic003G388400 Sobic004G298700 Sobic004G298700 Sobic004G247400--Sobic004G298700 Sobic004G247400--Sobic003G198000 Sobic001G432500 Sobic001G432500 Sobic004G247400--Sobic001G432500 Sobic001G291500 Sobic001G291500 Sobic004G247400--Sobic001G291500 Sobic004G247400--Sobic005G190900 Sobic004G183800 Sobic004G183800 Sobic002G115100--Sobic004G183800 Sobic010G030300 Sobic010G030300 Sobic002G115100--Sobic010G030300 Sobic010G269400 Sobic010G269400 Sobic002G115100--Sobic010G269400 Sobic002G115100--Sobic001G404500 Sobic004G210900 Sobic004G210900 Sobic002G115100--Sobic004G210900 Sobic005G175500 Sobic005G175500 Sobic002G115100--Sobic005G175500 Sobic006G123500 Sobic006G123500 Sobic002G115100--Sobic006G123500 Sobic008G072700 Sobic008G072700 Sobic002G115100--Sobic008G072700 Sobic004G268500 Sobic004G268500 Sobic002G115100--Sobic004G268500 Sobic002G281800 Sobic002G281800 Sobic003G104500--Sobic002G281800 Sobic003G291400 Sobic003G291400 Sobic003G104500--Sobic003G291400 Sobic003G104500--Sobic001G404500 Sobic003G104500--Sobic002G281000 Sobic009G254200 Sobic009G254200 Sobic003G104500--Sobic009G254200 Sobic002G296600 Sobic002G296600 Sobic003G104500--Sobic002G296600 Sobic003G104500--Sobic002G115100 Sobic004G096100 Sobic004G096100 Sobic003G104500--Sobic004G096100 Sobic003G292600 Sobic003G292600 Sobic003G104500--Sobic003G292600
Octagon: transcription factors


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