Gene annotation
Transcriptome id Sobic.002G203800.1
Synonym ATABCG40, ABCG40, PDR12, Sb02g024840, ATPDR12
Functional annotation pleiotropic drug resistance protein, putative, expressed
UniProt C5XCV5
Pfam PF14510 PF08370 PF00005 PF01061
Panther DB PTHR19241 PTHR19241:SF273
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016887; ATPase activity GO:0005524ATP binding GO:0016020membrane


Orthologs (automatic annotation)
TAIR AT1G15520 : pleiotropic drug resistance 12
RAP-DB (Rice) LOC_Os01g42380.1 : pleiotropic drug resistance protein, putative, expressed
MaizeGDB (Corn) Zm00025a038481 , Zm00025a028685 , Zm00025a028684 , Zm00025a038480
Brachypodium PNT72368 , KQK08670 , KQK08666
Barley HORVU3Hr1G053350.9 , HORVU3Hr1G053350.8 , HORVU3Hr1G053350.39 , HORVU3Hr1G053350.38 , HORVU3Hr1G053350.36 , HORVU3Hr1G053350.34 , HORVU3Hr1G053350.33 , HORVU3Hr1G053350.32 , HORVU3Hr1G053350.31 , HORVU3Hr1G053350.30 , HORVU3Hr1G053350.28 , HORVU3Hr1G053350.29 , HORVU3Hr1G053350.24 , HORVU3Hr1G053350.25 , HORVU3Hr1G053350.26 , HORVU3Hr1G053350.27 , HORVU3Hr1G053350.20 , HORVU3Hr1G053350.21 , HORVU3Hr1G053350.22 , HORVU3Hr1G053350.23 , HORVU3Hr1G053350.11 , HORVU3Hr1G053350.10 , HORVU3Hr1G053350.13 , HORVU3Hr1G053350.12 , HORVU3Hr1G053350.15 , HORVU3Hr1G053350.14 , HORVU3Hr1G053350.17 , HORVU3Hr1G053350.16 , HORVU3Hr1G053350.19 , HORVU3Hr1G053350.18 , HORVU3Hr1G053350.5 , HORVU3Hr1G053350.4 , HORVU3Hr1G053350.7 , HORVU3Hr1G053350.6 , HORVU3Hr1G053350.1 , HORVU3Hr1G053350.3 , HORVU3Hr1G053350.2 , HORVU7Hr1G092510.7
Wheat TraesCS3B02G248400 , TraesCS3A02G217900 , TraesCS3D02G234400
Populus PNT16680 , PNT46280 , PNT55384 , PNT33613 , PNT55385 , PNT43705 , PNT46279


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G173100 cytochrome P450, putative, expressed -
2 Sobic.008G005400 cysteine-rich receptor-like protein kinase 4 precursor, putative, expressed K04730: interleukin-1 receptor-associated kinase 1
3 Sobic.002G267000 helix-loop-helix DNA-binding domain containing protein, expressed -
4 Sobic.007G138800 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
5 Sobic.003G414100 tropinone reductase, putative, expressed K08081: tropinone reductase I
6 Sobic.010G108301 - K15397: 3-ketoacyl-CoA synthase
7 Sobic.010G108600 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
8 Sobic.007G095000 cytochrome P450, putative, expressed -
9 Sobic.010G108100 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
10 Sobic.005G135000 chalcone synthase, putative, expressed -
11 Sobic.007G195500 thiol protease SEN102 precursor, putative, expressed -
12 Sobic.005G135800 chalcone and stilbene synthases, putative, expressed -
13 Sobic.004G293800 thioesterase family protein, putative, expressed -
14 Sobic.010G124500 estradiol 17-beta-dehydrogenase 12, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
15 Sobic.010G108001 - K15397: 3-ketoacyl-CoA synthase
16 Sobic.003G071100 expressed protein K10703: HACD, PHS1, very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase
17 Sobic.004G293900 thioesterase family protein, putative, expressed -
18 Sobic.010G159500 LTPL5 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -
19 Sobic.003G206000 THION27 - Plant thionin family protein precursor, expressed -
20 Sobic.001G332050 - -


Gene co-expression network
sample Sobic002G203800 Sobic002G203800 Sobic001G173100 Sobic001G173100 Sobic002G203800--Sobic001G173100 Sobic008G005400 Sobic008G005400 Sobic002G203800--Sobic008G005400 Sobic002G267000 Sobic002G267000 Sobic002G203800--Sobic002G267000 Sobic007G138800 Sobic007G138800 Sobic002G203800--Sobic007G138800 Sobic003G414100 Sobic003G414100 Sobic002G203800--Sobic003G414100 Sobic010G108301 Sobic010G108301 Sobic002G203800--Sobic010G108301 Sobic010G108600 Sobic010G108600 Sobic002G203800--Sobic010G108600 Sobic007G095000 Sobic007G095000 Sobic002G203800--Sobic007G095000 Sobic010G108100 Sobic010G108100 Sobic002G203800--Sobic010G108100 Sobic001G173100--Sobic007G138800 Sobic001G173100--Sobic010G108600 Sobic001G173100--Sobic002G267000 Sobic001G173100--Sobic007G095000 Sobic001G173100--Sobic010G108301 Sobic001G173100--Sobic010G108100 Sobic005G135000 Sobic005G135000 Sobic001G173100--Sobic005G135000 Sobic005G135800 Sobic005G135800 Sobic001G173100--Sobic005G135800 Sobic010G124500 Sobic010G124500 Sobic001G173100--Sobic010G124500 Sobic008G005400--Sobic010G108301 Sobic008G005400--Sobic002G267000 Sobic008G005400--Sobic003G414100 Sobic008G005400--Sobic007G138800 Sobic006G188100 Sobic006G188100 Sobic008G005400--Sobic006G188100 Sobic008G005400--Sobic005G135000 Sobic008G005400--Sobic010G108600 Sobic008G005400--Sobic010G108100 Sobic008G005400--Sobic001G173100 Sobic002G267000--Sobic007G138800 Sobic002G267000--Sobic010G108301 Sobic002G267000--Sobic010G108600 Sobic002G267000--Sobic005G135000 Sobic002G267000--Sobic010G108100 Sobic004G293800 Sobic004G293800 Sobic002G267000--Sobic004G293800 Sobic002G267000--Sobic005G135800 Sobic002G267000--Sobic010G124500 Sobic002G267000--Sobic007G095000 Sobic007G138800--Sobic002G267000 Sobic007G138800--Sobic010G108600 Sobic007G138800--Sobic010G108301 Sobic007G138800--Sobic005G135000 Sobic007G138800--Sobic010G108100 Sobic007G138800--Sobic005G135800 Sobic007G138800--Sobic010G124500 Sobic007G138800--Sobic007G095000 Sobic007G195500 Sobic007G195500 Sobic007G138800--Sobic007G195500 Sobic003G414100--Sobic008G005400 Sobic003G414100--Sobic010G108301 Sobic003G414100--Sobic006G188100 Sobic003G414100--Sobic002G267000 Sobic003G414100--Sobic007G138800 Sobic003G414100--Sobic001G173100 Sobic003G414100--Sobic005G135000 Sobic003G414100--Sobic010G108600 Sobic003G414100--Sobic010G108100 Sobic010G108301--Sobic002G267000 Sobic010G108301--Sobic007G138800 Sobic010G108301--Sobic010G108600 Sobic010G108301--Sobic005G135000 Sobic010G108301--Sobic008G005400 Sobic010G108301--Sobic010G108100 Sobic010G108301--Sobic001G173100 Sobic010G108301--Sobic007G095000 Sobic010G108301--Sobic004G293800 Sobic010G108600--Sobic010G108100 Sobic010G108600--Sobic004G293800 Sobic010G108600--Sobic005G135800 Sobic010G108600--Sobic010G124500 Sobic003G071100 Sobic003G071100 Sobic010G108600--Sobic003G071100 Sobic010G108600--Sobic007G138800 Sobic010G108001 Sobic010G108001 Sobic010G108600--Sobic010G108001 Sobic010G108600--Sobic007G195500 Sobic010G108600--Sobic007G095000 Sobic006G125600 Sobic006G125600 Sobic007G095000--Sobic006G125600 Sobic007G095000--Sobic005G135800 Sobic007G095000--Sobic010G124500 Sobic003G071300 Sobic003G071300 Sobic007G095000--Sobic003G071300 Sobic007G095000--Sobic003G071100 Sobic010G108200 Sobic010G108200 Sobic007G095000--Sobic010G108200 Sobic007G095000--Sobic010G108001 Sobic005G135400 Sobic005G135400 Sobic007G095000--Sobic005G135400 Sobic007G095000--Sobic004G293800 Sobic010G108100--Sobic007G195500 Sobic010G108100--Sobic004G293800 Sobic010G108100--Sobic010G108001 Sobic010G108100--Sobic010G108600 Sobic010G108100--Sobic005G135800 Sobic010G108100--Sobic003G071100 Sobic010G108100--Sobic010G124500 Sobic009G116300 Sobic009G116300 Sobic010G108100--Sobic009G116300 Sobic003G206000 Sobic003G206000 Sobic010G108100--Sobic003G206000
Octagon: transcription factors


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