Gene annotation
Transcriptome id Sobic.003G211300.2
Synonym
Functional annotation csAtPR5, putative, expressed
UniProt A0A1W0VYD2
Pfam -
Panther DB PTHR33065 PTHR33065:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os08g04580.1 : csAtPR5, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G144900 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@peroxidase precursor, putative, expressed K00430: peroxidase
2 Sobic.009G144800 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
3 Sobic.005G101900 O-methyltransferase, putative, expressed -
4 Sobic.005G011900 - -
5 Sobic.005G102300 dirigent, putative, expressed -
6 Sobic.001G539300 expressed protein -
7 Sobic.001G539300 expressed protein -
8 Sobic.001G539300 expressed protein -
9 Sobic.001G539300 expressed protein -
10 Sobic.001G539300 expressed protein -
11 Sobic.001G539300 expressed protein -
12 Sobic.001G101300 PIII3 - Proteinase inhibitor II family protein precursor, putative, expressed -
13 Sobic.001G173150 - -
14 Sobic.010G156400 expressed protein -
15 Sobic.008G158501 - -
16 Sobic.008G184700 CND41, chloroplast nucleoid DNA binding protein, putative, expressed -
17 Sobic.004G292600 LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
18 Sobic.009G178550 - -
19 Sobic.006G218300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
20 Sobic.005G156850 - -


Gene co-expression network
sample Sobic003G211300 Sobic003G211300 Sobic009G144900 Sobic009G144900 Sobic003G211300--Sobic009G144900 Sobic009G144800 Sobic009G144800 Sobic003G211300--Sobic009G144800 Sobic005G101900 Sobic005G101900 Sobic003G211300--Sobic005G101900 Sobic005G011900 Sobic005G011900 Sobic003G211300--Sobic005G011900 Sobic005G102300 Sobic005G102300 Sobic003G211300--Sobic005G102300 Sobic001G539300 Sobic001G539300 Sobic003G211300--Sobic001G539300 Sobic009G144900--Sobic009G144800 Sobic005G177600 Sobic005G177600 Sobic009G144900--Sobic005G177600 Sobic005G070200 Sobic005G070200 Sobic009G144900--Sobic005G070200 Sobic010G016850 Sobic010G016850 Sobic009G144900--Sobic010G016850 Sobic004G189500 Sobic004G189500 Sobic009G144900--Sobic004G189500 Sobic004G169300 Sobic004G169300 Sobic009G144900--Sobic004G169300 Sobic001G400900 Sobic001G400900 Sobic009G144900--Sobic001G400900 Sobic006G121500 Sobic006G121500 Sobic009G144900--Sobic006G121500 Sobic005G069800 Sobic005G069800 Sobic009G144900--Sobic005G069800 Sobic009G144800--Sobic009G144900 Sobic009G144800--Sobic005G177600 Sobic001G114900 Sobic001G114900 Sobic009G144800--Sobic001G114900 Sobic009G144800--Sobic005G070200 Sobic002G010900 Sobic002G010900 Sobic009G144800--Sobic002G010900 Sobic008G022000 Sobic008G022000 Sobic009G144800--Sobic008G022000 Sobic009G144800--Sobic005G101900 Sobic002G369400 Sobic002G369400 Sobic009G144800--Sobic002G369400 Sobic005G110454 Sobic005G110454 Sobic009G144800--Sobic005G110454 Sobic005G101900--Sobic005G102300 Sobic005G101900--Sobic009G144800 Sobic004G138900 Sobic004G138900 Sobic005G101900--Sobic004G138900 Sobic005G101900--Sobic002G369400 Sobic005G101900--Sobic009G144900 Sobic006G010100 Sobic006G010100 Sobic005G101900--Sobic006G010100 Sobic001G242000 Sobic001G242000 Sobic005G101900--Sobic001G242000 Sobic005G101900--Sobic005G070200 Sobic005G101900--Sobic005G011900 Sobic010G156400 Sobic010G156400 Sobic005G011900--Sobic010G156400 Sobic005G011900--Sobic001G539300 Sobic001G162233 Sobic001G162233 Sobic005G011900--Sobic001G162233 Sobic004G292600 Sobic004G292600 Sobic005G011900--Sobic004G292600 Sobic005G102300--Sobic004G138900 Sobic005G102300--Sobic005G101900 Sobic005G102300--Sobic009G144800 Sobic005G102300--Sobic006G010100 Sobic008G156500 Sobic008G156500 Sobic005G102300--Sobic008G156500 Sobic005G102300--Sobic009G144900 Sobic010G137366 Sobic010G137366 Sobic005G102300--Sobic010G137366 Sobic001G195300 Sobic001G195300 Sobic005G102300--Sobic001G195300 Sobic005G102300--Sobic005G110454 Sobic001G539300--Sobic001G539300 Sobic001G539300--Sobic010G156400 Sobic009G178550 Sobic009G178550 Sobic001G539300--Sobic009G178550 Sobic008G184700 Sobic008G184700 Sobic001G539300--Sobic008G184700 Sobic001G539300--Sobic004G292600
Octagon: transcription factors


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