Gene annotation
Transcriptome id Sobic.003G266100.3,Sobic.003G266100.1,Sobic.003G266100.2,Sobic.003G266100.4
Synonym Sb03g031920, ESP4
Functional annotation ESP4, putative, expressed
UniProt A0A1W0VZ29 , A0A1W0VZ12
Pfam PF11935 PF12295
Panther DB PTHR15245 PTHR15245:SF20
NCBI CDD KOG1895; mRNA cleavage and polyadenylation factor II complex, subunit PTA1
KEGG Orthology K06100; symplekin
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G01400 : HEAT repeat-containing protein
RAP-DB (Rice) LOC_Os01g49940.1 : ESP4, putative, expressed
MaizeGDB (Corn) Zm00025a027923
Brachypodium KQK09305 , KQK09304 , KQK09306 , PNT72636
Barley HORVU3Hr1G064850.18 , HORVU3Hr1G064850.19 , HORVU3Hr1G064850.12 , HORVU3Hr1G064850.13 , HORVU3Hr1G064850.10 , HORVU3Hr1G064850.11 , HORVU3Hr1G064850.16 , HORVU3Hr1G064850.17 , HORVU3Hr1G064850.14 , HORVU3Hr1G064850.15 , HORVU6Hr1G076290.1 , HORVU3Hr1G064850.1 , HORVU3Hr1G064850.2 , HORVU3Hr1G064850.3 , HORVU3Hr1G064850.4 , HORVU3Hr1G064850.5 , HORVU3Hr1G064850.7 , HORVU3Hr1G064850.8 , HORVU3Hr1G064850.9 , HORVU3Hr1G064850.23 , HORVU3Hr1G064850.22 , HORVU3Hr1G064850.21 , HORVU3Hr1G064850.20 , HORVU3Hr1G064850.27 , HORVU3Hr1G064850.26 , HORVU3Hr1G064850.25 , HORVU3Hr1G064850.24 , HORVU3Hr1G064850.28
Wheat TraesCS3A02G259200 , TraesCS3A02G259200 , TraesCS3D02G259300 , TraesCS3B02G292200 , TraesCS3D02G259300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G172200 receptor-like protein kinase 5 precursor, putative, expressed -
2 Sobic.004G220900 ethylene-insensitive protein 2, putative, expressed -
3 Sobic.002G172100 receptor-like protein kinase 5 precursor, putative, expressed -
4 Sobic.003G294800 plastocyanin-like domain containing protein, putative, expressed -
5 Sobic.008G159300 KUN1 - Kunitz-type trypsin inhibitor precursor, expressed -
6 Sobic.006G004100 no apical meristem protein, putative, expressed -
7 Sobic.005G082300 - -
8 Sobic.002G059500 OsFBX237 - F-box domain containing protein, expressed -
9 Sobic.001G511400 BES1/BZR1 homolog protein, putative, expressed -
10 Sobic.002G015400 OsFBD13 - F-box and FBD domain containing protein, expressed -
11 Sobic.006G040101 - -
12 Sobic.003G106400 3-beta-hydroxysteroid-Delta-isomerase, putative, expressed K01824: cholestenol Delta-isomerase
13 Sobic.008G109600 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed -
14 Sobic.002G058900 OsFBX237 - F-box domain containing protein, expressed -
15 Sobic.009G021400 Jacalin-like lectin domain containing protein, putative, expressed -
16 Sobic.005G188800 - -
17 Sobic.007G037200 expressed protein -
18 Sobic.005G147500 - -
19 Sobic.006G264800 GASR6 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, expressed -
20 Sobic.001G274025 - -


Gene co-expression network
sample Sobic003G266100 Sobic003G266100 Sobic002G172200 Sobic002G172200 Sobic003G266100--Sobic002G172200 Sobic004G220900 Sobic004G220900 Sobic003G266100--Sobic004G220900 Sobic002G172100 Sobic002G172100 Sobic003G266100--Sobic002G172100 Sobic003G294800 Sobic003G294800 Sobic003G266100--Sobic003G294800 Sobic008G159300 Sobic008G159300 Sobic003G266100--Sobic008G159300 Sobic006G004100 Sobic006G004100 Sobic003G266100--Sobic006G004100 Sobic005G082300 Sobic005G082300 Sobic003G266100--Sobic005G082300 Sobic002G059500 Sobic002G059500 Sobic003G266100--Sobic002G059500 Sobic001G511400 Sobic001G511400 Sobic003G266100--Sobic001G511400 Sobic002G172200--Sobic005G082300 Sobic002G172200--Sobic002G172100 Sobic002G172200--Sobic003G266100 Sobic002G172200--Sobic001G511400 Sobic002G172200--Sobic003G294800 Sobic005G147500 Sobic005G147500 Sobic002G172200--Sobic005G147500 Sobic002G015400 Sobic002G015400 Sobic002G172200--Sobic002G015400 Sobic005G188800 Sobic005G188800 Sobic002G172200--Sobic005G188800 Sobic001G284700 Sobic001G284700 Sobic002G172200--Sobic001G284700 Sobic003G106400 Sobic003G106400 Sobic004G220900--Sobic003G106400 Sobic004G220900--Sobic003G266100 Sobic004G220900--Sobic006G004100 Sobic009G021400 Sobic009G021400 Sobic004G220900--Sobic009G021400 Sobic007G037200 Sobic007G037200 Sobic004G220900--Sobic007G037200 Sobic004G220900--Sobic002G172100 Sobic004G220900--Sobic003G294800 Sobic004G220900--Sobic008G159300 Sobic005G032500 Sobic005G032500 Sobic004G220900--Sobic005G032500 Sobic002G172100--Sobic003G294800 Sobic006G264800 Sobic006G264800 Sobic002G172100--Sobic006G264800 Sobic002G172100--Sobic002G172200 Sobic002G172100--Sobic005G147500 Sobic002G172100--Sobic005G082300 Sobic002G172100--Sobic003G266100 Sobic009G058300 Sobic009G058300 Sobic002G172100--Sobic009G058300 Sobic002G172100--Sobic001G284700 Sobic001G274025 Sobic001G274025 Sobic002G172100--Sobic001G274025 Sobic003G294800--Sobic005G188800 Sobic003G294800--Sobic002G172100 Sobic003G294800--Sobic005G082300 Sobic003G294800--Sobic005G147500 Sobic003G294800--Sobic006G264800 Sobic003G294800--Sobic003G266100 Sobic003G294800--Sobic002G172200 Sobic003G294800--Sobic001G274025 Sobic008G109600 Sobic008G109600 Sobic003G294800--Sobic008G109600 Sobic008G159300--Sobic002G015400 Sobic002G058900 Sobic002G058900 Sobic008G159300--Sobic002G058900 Sobic008G159300--Sobic001G511400 Sobic008G159300--Sobic003G266100 Sobic008G159300--Sobic007G037200 Sobic008G159300--Sobic005G032500 Sobic008G159300--Sobic002G172200 Sobic008G159300--Sobic002G172100 Sobic008G159300--Sobic004G220900 Sobic006G004100--Sobic004G220900 Sobic006G004100--Sobic003G266100 Sobic006G004100--Sobic002G059500 Sobic005G197000 Sobic005G197000 Sobic006G004100--Sobic005G197000 Sobic006G004100--Sobic002G058900 Sobic006G004100--Sobic007G037200 Sobic002G217000 Sobic002G217000 Sobic006G004100--Sobic002G217000 Sobic006G004100--Sobic008G159300 Sobic006G040101 Sobic006G040101 Sobic006G004100--Sobic006G040101 Sobic005G082300--Sobic002G172200 Sobic005G082300--Sobic003G294800 Sobic005G082300--Sobic002G172100 Sobic005G082300--Sobic005G188800 Sobic005G082300--Sobic003G266100 Sobic005G082300--Sobic005G147500 Sobic005G082300--Sobic001G511400 Sobic009G057100 Sobic009G057100 Sobic005G082300--Sobic009G057100 Sobic006G081400 Sobic006G081400 Sobic005G082300--Sobic006G081400 Sobic002G059500--Sobic006G040101 Sobic002G300900 Sobic002G300900 Sobic002G059500--Sobic002G300900 Sobic002G059500--Sobic003G266100 Sobic005G035500 Sobic005G035500 Sobic002G059500--Sobic005G035500 Sobic002G059500--Sobic006G004100 Sobic007G025100 Sobic007G025100 Sobic002G059500--Sobic007G025100 Sobic002G059500--Sobic001G511400 Sobic002G059500--Sobic008G159300 Sobic002G059500--Sobic002G172200 Sobic001G511400--Sobic002G015400 Sobic001G511400--Sobic002G172200 Sobic001G511400--Sobic008G159300 Sobic001G511400--Sobic002G172100 Sobic001G511400--Sobic003G266100 Sobic001G511400--Sobic005G147500 Sobic001G511400--Sobic001G284700 Sobic001G511400--Sobic009G058300 Sobic001G511400--Sobic005G082300
Octagon: transcription factors


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