Gene annotation
Transcriptome id Sobic.002G058900.1
Synonym Sb02g004940
Functional annotation OsFBX237 - F-box domain containing protein, expressed
UniProt A0A1B6Q9H1
Pfam PF08268 PF00646
Panther DB PTHR32133 PTHR32133:SF142
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G07610 : F-box family protein
RAP-DB (Rice) LOC_Os07g35050.1 : OsFBX237 - F-box domain containing protein, expressed
MaizeGDB (Corn) Zm00025a045228 , Zm00025a045220 , Zm00025a045219 , Zm00025a045232 , Zm00025a045234 , Zm00025a026428
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.002G058900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G159300 KUN1 - Kunitz-type trypsin inhibitor precursor, expressed -
2 Sobic.007G037200 expressed protein -
3 Sobic.002G217000 expressed protein -
4 Sobic.005G032500 ASH-like SPRY domain containing protein, putative, expressed K14964: Set1/Ash2 histone methyltransferase complex subunit ASH2
5 Sobic.002G015400 OsFBD13 - F-box and FBD domain containing protein, expressed -
6 Sobic.006G004100 no apical meristem protein, putative, expressed -
7 Sobic.002G101200 zinc finger, C3HC4 type domain containing protein, expressed K10638: UHRF1, E3 ubiquitin-protein ligase UHRF1
8 Sobic.003G266100 ESP4, putative, expressed K06100: symplekin
9 Sobic.002G059500 OsFBX237 - F-box domain containing protein, expressed -
10 Sobic.004G220900 ethylene-insensitive protein 2, putative, expressed -
11 Sobic.001G511400 BES1/BZR1 homolog protein, putative, expressed -
12 Sobic.008G031400 OsSub63 - Putative Subtilisin homologue, expressed -
13 Sobic.002G100000 OsFBL33 - F-box domain and LRR containing protein, expressed -
14 Sobic.005G197000 RNA recognition motif containing protein, putative, expressed K14411: RNA-binding protein Musashi
15 Sobic.002G172200 receptor-like protein kinase 5 precursor, putative, expressed -
16 Sobic.006G040101 - -
17 Sobic.003G225800 AAA-type ATPase family protein, putative, expressed -
18 Sobic.002G172100 receptor-like protein kinase 5 precursor, putative, expressed -
19 Sobic.009G139500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -
20 Sobic.005G035500 expressed protein -


Gene co-expression network
sample Sobic002G058900 Sobic002G058900 Sobic008G159300 Sobic008G159300 Sobic002G058900--Sobic008G159300 Sobic007G037200 Sobic007G037200 Sobic002G058900--Sobic007G037200 Sobic002G217000 Sobic002G217000 Sobic002G058900--Sobic002G217000 Sobic005G032500 Sobic005G032500 Sobic002G058900--Sobic005G032500 Sobic002G015400 Sobic002G015400 Sobic002G058900--Sobic002G015400 Sobic006G004100 Sobic006G004100 Sobic002G058900--Sobic006G004100 Sobic002G101200 Sobic002G101200 Sobic002G058900--Sobic002G101200 Sobic003G266100 Sobic003G266100 Sobic002G058900--Sobic003G266100 Sobic002G059500 Sobic002G059500 Sobic002G058900--Sobic002G059500 Sobic008G159300--Sobic002G015400 Sobic008G159300--Sobic002G058900 Sobic001G511400 Sobic001G511400 Sobic008G159300--Sobic001G511400 Sobic008G159300--Sobic003G266100 Sobic008G159300--Sobic007G037200 Sobic008G159300--Sobic005G032500 Sobic002G172200 Sobic002G172200 Sobic008G159300--Sobic002G172200 Sobic002G172100 Sobic002G172100 Sobic008G159300--Sobic002G172100 Sobic004G220900 Sobic004G220900 Sobic008G159300--Sobic004G220900 Sobic007G037200--Sobic005G032500 Sobic007G037200--Sobic004G220900 Sobic007G037200--Sobic002G058900 Sobic007G037200--Sobic008G159300 Sobic002G100000 Sobic002G100000 Sobic007G037200--Sobic002G100000 Sobic007G037200--Sobic002G217000 Sobic008G031400 Sobic008G031400 Sobic007G037200--Sobic008G031400 Sobic003G106400 Sobic003G106400 Sobic007G037200--Sobic003G106400 Sobic004G212350 Sobic004G212350 Sobic007G037200--Sobic004G212350 Sobic003G225800 Sobic003G225800 Sobic002G217000--Sobic003G225800 Sobic002G217000--Sobic002G101200 Sobic005G197000 Sobic005G197000 Sobic002G217000--Sobic005G197000 Sobic002G217000--Sobic002G058900 Sobic002G217000--Sobic007G037200 Sobic005G089101 Sobic005G089101 Sobic002G217000--Sobic005G089101 Sobic002G217000--Sobic005G032500 Sobic002G217000--Sobic002G100000 Sobic002G217000--Sobic006G004100 Sobic005G032500--Sobic007G037200 Sobic005G032500--Sobic002G100000 Sobic005G032500--Sobic008G031400 Sobic005G032500--Sobic002G058900 Sobic005G032500--Sobic008G159300 Sobic005G032500--Sobic002G217000 Sobic005G032500--Sobic004G220900 Sobic005G032500--Sobic002G101200 Sobic005G032500--Sobic004G212350 Sobic002G015400--Sobic008G159300 Sobic002G015400--Sobic001G511400 Sobic002G015400--Sobic003G266100 Sobic002G015400--Sobic002G172200 Sobic002G015400--Sobic002G172100 Sobic002G015400--Sobic002G058900 Sobic009G058300 Sobic009G058300 Sobic002G015400--Sobic009G058300 Sobic001G495700 Sobic001G495700 Sobic002G015400--Sobic001G495700 Sobic002G015400--Sobic002G059500 Sobic006G004100--Sobic004G220900 Sobic006G004100--Sobic003G266100 Sobic006G004100--Sobic002G059500 Sobic006G004100--Sobic005G197000 Sobic006G004100--Sobic002G058900 Sobic006G004100--Sobic007G037200 Sobic006G004100--Sobic002G217000 Sobic006G004100--Sobic008G159300 Sobic006G040101 Sobic006G040101 Sobic006G004100--Sobic006G040101 Sobic002G101200--Sobic002G217000 Sobic002G101200--Sobic005G032500 Sobic002G101200--Sobic002G058900 Sobic002G101200--Sobic007G037200 Sobic002G166800 Sobic002G166800 Sobic002G101200--Sobic002G166800 Sobic002G101200--Sobic002G100000 Sobic002G101200--Sobic003G225800 Sobic006G031000 Sobic006G031000 Sobic002G101200--Sobic006G031000 Sobic009G051201 Sobic009G051201 Sobic002G101200--Sobic009G051201 Sobic003G266100--Sobic002G172200 Sobic003G266100--Sobic004G220900 Sobic003G266100--Sobic002G172100 Sobic003G294800 Sobic003G294800 Sobic003G266100--Sobic003G294800 Sobic003G266100--Sobic008G159300 Sobic003G266100--Sobic006G004100 Sobic005G082300 Sobic005G082300 Sobic003G266100--Sobic005G082300 Sobic003G266100--Sobic002G059500 Sobic003G266100--Sobic001G511400 Sobic002G059500--Sobic006G040101 Sobic002G300900 Sobic002G300900 Sobic002G059500--Sobic002G300900 Sobic002G059500--Sobic003G266100 Sobic005G035500 Sobic005G035500 Sobic002G059500--Sobic005G035500 Sobic002G059500--Sobic006G004100 Sobic007G025100 Sobic007G025100 Sobic002G059500--Sobic007G025100 Sobic002G059500--Sobic001G511400 Sobic002G059500--Sobic008G159300 Sobic002G059500--Sobic002G172200
Octagon: transcription factors


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