Gene annotation
Transcriptome id Sobic.003G295500.1
Synonym Sb03g034595
Functional annotation peptide transporter PTR2, putative, expressed
UniProt A0A1W0VZK7
Pfam PF00854
Panther DB PTHR11654 PTHR11654:SF131
NCBI CDD KOG1237; H+/oligopeptide symporter
KEGG Orthology K14638; SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT1G59740 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os01g54515.1 : peptide transporter PTR2, putative, expressed
MaizeGDB (Corn) Zm00025a027580
Brachypodium PNT72860
Barley HORVU7Hr1G006930.2 , HORVU3Hr1G071510.3 , HORVU3Hr1G071510.2 , HORVU3Hr1G071510.1 , HORVU7Hr1G006930.1 , HORVU1Hr1G050540.2 , HORVU1Hr1G050540.1 , HORVU2Hr1G098210.1 , HORVU2Hr1G098210.2
Wheat TraesCS3A02G272600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G217900 expressed protein -
2 Sobic.001G265000 expressed protein -
3 Sobic.009G236150 - -
4 Sobic.007G151250 - -
5 Sobic.008G108100 - -
6 Sobic.002G160500 - K07466: RFA1, RPA1, replication factor A1
7 Sobic.002G160500 - K07466: RFA1, RPA1, replication factor A1
8 Sobic.002G160500 - K07466: RFA1, RPA1, replication factor A1
9 Sobic.002G160500 - K07466: RFA1, RPA1, replication factor A1
10 Sobic.002G160500 - K07466: RFA1, RPA1, replication factor A1
11 Sobic.004G262550 - -
12 Sobic.003G267150 - -
13 Sobic.009G091940 - -
14 Sobic.003G389150 - -
15 Sobic.004G313000 leucine rich repeat containing protein, expressed -
16 Sobic.005G162200 cytochrome P450, putative, expressed K05917: sterol 14alpha-demethylase
17 Sobic.002G319900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AAA family ATPase, putative, expressed K08900: mitochondrial chaperone BCS1
18 Sobic.003G261766 - -
19 Sobic.005G216833 - -
20 Sobic.006G135550 - -


Gene co-expression network
sample Sobic003G295500 Sobic003G295500 Sobic007G217900 Sobic007G217900 Sobic003G295500--Sobic007G217900 Sobic001G265000 Sobic001G265000 Sobic003G295500--Sobic001G265000 Sobic009G236150 Sobic009G236150 Sobic003G295500--Sobic009G236150 Sobic007G151250 Sobic007G151250 Sobic003G295500--Sobic007G151250 Sobic008G108100 Sobic008G108100 Sobic003G295500--Sobic008G108100 Sobic002G160500 Sobic002G160500 Sobic003G295500--Sobic002G160500 Sobic007G217900--Sobic003G295500 Sobic007G217900--Sobic008G108100 Sobic007G217900--Sobic009G236150 Sobic007G217900--Sobic002G160500 Sobic004G262550 Sobic004G262550 Sobic007G217900--Sobic004G262550 Sobic001G265000--Sobic002G160500 Sobic001G265000--Sobic004G262550 Sobic003G267150 Sobic003G267150 Sobic001G265000--Sobic003G267150 Sobic005G162200 Sobic005G162200 Sobic001G265000--Sobic005G162200 Sobic001G265000--Sobic008G108100 Sobic005G216833 Sobic005G216833 Sobic009G236150--Sobic005G216833 Sobic004G313000 Sobic004G313000 Sobic009G236150--Sobic004G313000 Sobic003G261766 Sobic003G261766 Sobic009G236150--Sobic003G261766 Sobic009G115800 Sobic009G115800 Sobic009G236150--Sobic009G115800 Sobic009G236150--Sobic003G267150 Sobic009G236150--Sobic008G108100 Sobic009G236150--Sobic002G160500 Sobic007G151250--Sobic003G261766 Sobic005G165300 Sobic005G165300 Sobic007G151250--Sobic005G165300 Sobic007G151250--Sobic009G115800 Sobic005G041150 Sobic005G041150 Sobic007G151250--Sobic005G041150 Sobic006G083050 Sobic006G083050 Sobic007G151250--Sobic006G083050 Sobic007G151250--Sobic005G216833 Sobic006G135550 Sobic006G135550 Sobic007G151250--Sobic006G135550 Sobic007G151250--Sobic009G236150 Sobic007G151250--Sobic008G108100 Sobic008G108100--Sobic003G267150 Sobic008G108100--Sobic009G115800 Sobic008G108100--Sobic002G160500 Sobic008G108100--Sobic004G313000 Sobic008G108100--Sobic004G262550 Sobic002G160500--Sobic002G160500 Sobic002G160500--Sobic003G267150 Sobic002G160500--Sobic004G262550 Sobic009G091940 Sobic009G091940 Sobic002G160500--Sobic009G091940 Sobic003G389150 Sobic003G389150 Sobic002G160500--Sobic003G389150 Sobic002G160500--Sobic004G313000
Octagon: transcription factors


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