Gene annotation
Transcriptome id Sobic.007G217900.3
Synonym Sb07g028450
Functional annotation expressed protein
UniProt A0A1Z5RBA1
Pfam PF07762
Panther DB PTHR33086 PTHR33086:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g14170.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS3D02G102400
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G295500 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
2 Sobic.008G108100 - -
3 Sobic.009G236150 - -
4 Sobic.002G160500 - K07466: RFA1, RPA1, replication factor A1
5 Sobic.002G160500 - K07466: RFA1, RPA1, replication factor A1
6 Sobic.002G160500 - K07466: RFA1, RPA1, replication factor A1
7 Sobic.002G160500 - K07466: RFA1, RPA1, replication factor A1
8 Sobic.002G160500 - K07466: RFA1, RPA1, replication factor A1
9 Sobic.004G262550 - -
10 Sobic.003G267150 - -
11 Sobic.004G313000 leucine rich repeat containing protein, expressed -
12 Sobic.009G091940 - -
13 Sobic.003G389150 - -
14 Sobic.001G265000 expressed protein -
15 Sobic.009G098150 - -
16 Sobic.005G162200 cytochrome P450, putative, expressed K05917: sterol 14alpha-demethylase
17 Sobic.002G319900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AAA family ATPase, putative, expressed K08900: mitochondrial chaperone BCS1
18 Sobic.004G248000 expressed protein -
19 Sobic.005G216833 - -
20 Sobic.003G261766 - -


Gene co-expression network
sample Sobic007G217900 Sobic007G217900 Sobic003G295500 Sobic003G295500 Sobic007G217900--Sobic003G295500 Sobic008G108100 Sobic008G108100 Sobic007G217900--Sobic008G108100 Sobic009G236150 Sobic009G236150 Sobic007G217900--Sobic009G236150 Sobic002G160500 Sobic002G160500 Sobic007G217900--Sobic002G160500 Sobic004G262550 Sobic004G262550 Sobic007G217900--Sobic004G262550 Sobic003G295500--Sobic007G217900 Sobic001G265000 Sobic001G265000 Sobic003G295500--Sobic001G265000 Sobic003G295500--Sobic009G236150 Sobic007G151250 Sobic007G151250 Sobic003G295500--Sobic007G151250 Sobic003G295500--Sobic008G108100 Sobic003G295500--Sobic002G160500 Sobic003G267150 Sobic003G267150 Sobic008G108100--Sobic003G267150 Sobic009G115800 Sobic009G115800 Sobic008G108100--Sobic009G115800 Sobic008G108100--Sobic002G160500 Sobic004G313000 Sobic004G313000 Sobic008G108100--Sobic004G313000 Sobic008G108100--Sobic004G262550 Sobic005G216833 Sobic005G216833 Sobic009G236150--Sobic005G216833 Sobic009G236150--Sobic004G313000 Sobic003G261766 Sobic003G261766 Sobic009G236150--Sobic003G261766 Sobic009G236150--Sobic009G115800 Sobic009G236150--Sobic003G267150 Sobic009G236150--Sobic008G108100 Sobic009G236150--Sobic002G160500 Sobic002G160500--Sobic002G160500 Sobic002G160500--Sobic003G267150 Sobic002G160500--Sobic004G262550 Sobic009G091940 Sobic009G091940 Sobic002G160500--Sobic009G091940 Sobic003G389150 Sobic003G389150 Sobic002G160500--Sobic003G389150 Sobic002G160500--Sobic004G313000 Sobic004G262550--Sobic002G160500 Sobic004G262550--Sobic003G267150 Sobic004G262550--Sobic009G091940 Sobic004G262550--Sobic003G389150 Sobic004G262550--Sobic004G313000
Octagon: transcription factors


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