Gene annotation
Transcriptome id Sobic.004G073800.1
Synonym SRF8, Sb04g006110
Functional annotation STRUBBELIG-RECEPTOR FAMILY 7 precursor, putative, expressed
UniProt C5XX28
Pfam PF08263 PF13855 PF07714
Panther DB PTHR27001 PTHR27001:SF47
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0006468protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G22130 : STRUBBELIG-receptor family 8
RAP-DB (Rice) LOC_Os02g09740.1 : STRUBBELIG-RECEPTOR FAMILY 7 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a019379
Brachypodium KQK17582 , KQJ93769
Barley HORVU6Hr1G034990.11 , HORVU6Hr1G034990.10 , HORVU6Hr1G034990.13 , HORVU6Hr1G034990.12 , HORVU6Hr1G034990.9 , HORVU6Hr1G034990.8 , HORVU6Hr1G034990.1 , HORVU6Hr1G034990.3 , HORVU6Hr1G034990.2 , HORVU6Hr1G034990.5 , HORVU6Hr1G034990.4 , HORVU6Hr1G034990.7 , HORVU6Hr1G034990.6
Wheat TraesCS6D02G161000 , TraesCS7D02G386000 , TraesCS6B02G199500 , TraesCS6A02G171300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G128400 peptide-N4-asparagine amidase A, putative, expressed -
2 Sobic.001G449500 ternary complex factor MIP1, putative, expressed -
3 Sobic.004G312400 Peptidase family C50, putative, expressed K02365: separase
4 Sobic.001G088400 kinesin motor domain containing protein, putative, expressed K10400: kinesin family member 15
5 Sobic.001G221601 - -
6 Sobic.009G166400 MCM8 - Putative minichromosome maintenance MCM family subunit 8, expressed K10737: DNA helicase MCM8
7 Sobic.009G166650 - -
8 Sobic.002G390700 serine/threonine-protein kinase Haspin, putative, expressed K16315: serine/threonine-protein kinase haspin
9 Sobic.007G067900 expressed protein -
10 Sobic.010G277400 GASR8 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, expressed -
11 Sobic.003G186066 - -
12 Sobic.003G419000 - -
13 Sobic.009G147700 expressed protein -
14 Sobic.002G038500 tentative name(PubMedID : 31536532)@nuclear transcription factor Y subunit, putative, expressed K08064: NFYA, nuclear transcription factor Y, alpha
15 Sobic.004G064700 tubby, putative, expressed -
16 Sobic.004G266100 expressed protein -
17 Sobic.001G045100 peroxidase precursor, putative, expressed K00430: peroxidase
18 Sobic.010G196900 pleiotropic drug resistance protein, putative, expressed -
19 Sobic.003G105200 ethylene-responsive protein related, putative, expressed -
20 Sobic.003G092000 expressed protein K04506: E3 ubiquitin-protein ligase SIAH1


Gene co-expression network
sample Sobic004G073800 Sobic004G073800 Sobic009G128400 Sobic009G128400 Sobic004G073800--Sobic009G128400 Sobic001G449500 Sobic001G449500 Sobic004G073800--Sobic001G449500 Sobic004G312400 Sobic004G312400 Sobic004G073800--Sobic004G312400 Sobic001G088400 Sobic001G088400 Sobic004G073800--Sobic001G088400 Sobic001G221601 Sobic001G221601 Sobic004G073800--Sobic001G221601 Sobic009G166400 Sobic009G166400 Sobic004G073800--Sobic009G166400 Sobic009G166650 Sobic009G166650 Sobic004G073800--Sobic009G166650 Sobic002G390700 Sobic002G390700 Sobic004G073800--Sobic002G390700 Sobic007G067900 Sobic007G067900 Sobic004G073800--Sobic007G067900 Sobic009G128400--Sobic004G073800 Sobic001G454700 Sobic001G454700 Sobic009G128400--Sobic001G454700 Sobic009G218700 Sobic009G218700 Sobic009G128400--Sobic009G218700 Sobic002G337400 Sobic002G337400 Sobic009G128400--Sobic002G337400 Sobic003G351501 Sobic003G351501 Sobic009G128400--Sobic003G351501 Sobic001G524150 Sobic001G524150 Sobic009G128400--Sobic001G524150 Sobic004G129400 Sobic004G129400 Sobic009G128400--Sobic004G129400 Sobic010G196900 Sobic010G196900 Sobic009G128400--Sobic010G196900 Sobic009G058900 Sobic009G058900 Sobic009G128400--Sobic009G058900 Sobic001G449500--Sobic004G073800 Sobic001G449500--Sobic009G166400 Sobic004G266100 Sobic004G266100 Sobic001G449500--Sobic004G266100 Sobic002G095200 Sobic002G095200 Sobic001G449500--Sobic002G095200 Sobic003G341900 Sobic003G341900 Sobic001G449500--Sobic003G341900 Sobic001G449500--Sobic001G088400 Sobic009G112800 Sobic009G112800 Sobic001G449500--Sobic009G112800 Sobic001G534000 Sobic001G534000 Sobic001G449500--Sobic001G534000 Sobic010G174000 Sobic010G174000 Sobic001G449500--Sobic010G174000 Sobic002G297100 Sobic002G297100 Sobic004G312400--Sobic002G297100 Sobic004G064700 Sobic004G064700 Sobic004G312400--Sobic004G064700 Sobic003G312600 Sobic003G312600 Sobic004G312400--Sobic003G312600 Sobic002G187200 Sobic002G187200 Sobic004G312400--Sobic002G187200 Sobic006G145300 Sobic006G145300 Sobic004G312400--Sobic006G145300 Sobic004G312400--Sobic001G221601 Sobic003G232600 Sobic003G232600 Sobic004G312400--Sobic003G232600 Sobic004G312400--Sobic010G196900 Sobic002G246100 Sobic002G246100 Sobic004G312400--Sobic002G246100 Sobic001G088400--Sobic007G067900 Sobic002G113600 Sobic002G113600 Sobic001G088400--Sobic002G113600 Sobic001G088400--Sobic004G073800 Sobic009G192700 Sobic009G192700 Sobic001G088400--Sobic009G192700 Sobic006G137300 Sobic006G137300 Sobic001G088400--Sobic006G137300 Sobic010G213000 Sobic010G213000 Sobic001G088400--Sobic010G213000 Sobic002G294300 Sobic002G294300 Sobic001G088400--Sobic002G294300 Sobic005G164900 Sobic005G164900 Sobic001G088400--Sobic005G164900 Sobic010G158832 Sobic010G158832 Sobic001G088400--Sobic010G158832 Sobic001G221601--Sobic004G312400 Sobic001G221601--Sobic002G390700 Sobic001G221601--Sobic004G064700 Sobic001G221601--Sobic009G166650 Sobic001G221601--Sobic004G073800 Sobic003G107000 Sobic003G107000 Sobic001G221601--Sobic003G107000 Sobic001G221601--Sobic010G213000 Sobic001G221601--Sobic001G088400 Sobic001G088000 Sobic001G088000 Sobic001G221601--Sobic001G088000 Sobic009G166400--Sobic009G166650 Sobic009G097500 Sobic009G097500 Sobic009G166400--Sobic009G097500 Sobic002G305900 Sobic002G305900 Sobic009G166400--Sobic002G305900 Sobic004G272950 Sobic004G272950 Sobic009G166400--Sobic004G272950 SobicK031300 SobicK031300 Sobic009G166400--SobicK031300 SobicK043600 SobicK043600 Sobic009G166400--SobicK043600 Sobic001G455300 Sobic001G455300 Sobic009G166400--Sobic001G455300 Sobic003G168600 Sobic003G168600 Sobic009G166400--Sobic003G168600 Sobic009G209650 Sobic009G209650 Sobic009G166400--Sobic009G209650 Sobic009G166650--Sobic009G166400 Sobic002G095800 Sobic002G095800 Sobic009G166650--Sobic002G095800 Sobic009G166650--Sobic002G305900 Sobic009G166650--Sobic001G455300 Sobic009G166650--Sobic002G390700 Sobic009G166650--Sobic001G221601 Sobic007G102600 Sobic007G102600 Sobic009G166650--Sobic007G102600 Sobic001G394000 Sobic001G394000 Sobic009G166650--Sobic001G394000 Sobic009G166650--Sobic004G073800 Sobic010G078400 Sobic010G078400 Sobic002G390700--Sobic010G078400 Sobic001G303300 Sobic001G303300 Sobic002G390700--Sobic001G303300 Sobic002G390700--Sobic001G221601 Sobic002G074500 Sobic002G074500 Sobic002G390700--Sobic002G074500 Sobic003G106800 Sobic003G106800 Sobic002G390700--Sobic003G106800 Sobic003G092000 Sobic003G092000 Sobic002G390700--Sobic003G092000 Sobic002G390700--Sobic009G166650 Sobic009G014500 Sobic009G014500 Sobic002G390700--Sobic009G014500 Sobic002G239800 Sobic002G239800 Sobic002G390700--Sobic002G239800 Sobic006G276900 Sobic006G276900 Sobic007G067900--Sobic006G276900 Sobic006G140801 Sobic006G140801 Sobic007G067900--Sobic006G140801 Sobic007G067900--Sobic010G213000 Sobic001G135600 Sobic001G135600 Sobic007G067900--Sobic001G135600 Sobic007G067900--Sobic001G088400 Sobic010G206400 Sobic010G206400 Sobic007G067900--Sobic010G206400 Sobic002G206100 Sobic002G206100 Sobic007G067900--Sobic002G206100 Sobic007G067900--Sobic002G113600 Sobic007G067900--Sobic005G164900
Octagon: transcription factors


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