Gene annotation
Transcriptome id Sobic.004G218700.1
Synonym Sb04g026370
Functional annotation alcohol oxidase, putative, expressed
UniProt C5XXS1
Pfam PF13450 PF05199
Panther DB PTHR10668 PTHR10668:SF81
NCBI CDD -
KEGG Orthology K17756; long-chain-alcohol oxidase
Gene Ontology GO:0016614; oxidoreductase activity, acting on CH-OH group of donors


Orthologs (automatic annotation)
TAIR AT4G28570 : Long-chain fatty alcohol dehydrogenase family protein
RAP-DB (Rice) LOC_Os02g40840.1 : alcohol oxidase, putative, expressed
MaizeGDB (Corn) Zm00025a032010 , Zm00025a006633
Brachypodium PNT67535 , KQK00393 , KQJ97074
Barley HORVU0Hr1G015950.8 , HORVU0Hr1G015950.2 , HORVU0Hr1G015950.3 , HORVU0Hr1G015950.7 , HORVU0Hr1G015950.4 , HORVU0Hr1G015950.5 , HORVU1Hr1G040660.19 , HORVU1Hr1G040660.18 , HORVU1Hr1G040660.34 , HORVU1Hr1G040660.37 , HORVU1Hr1G040660.36 , HORVU1Hr1G040660.32 , HORVU1Hr1G040660.39 , HORVU1Hr1G040660.38 , HORVU1Hr1G040660.35 , HORVU1Hr1G040660.31 , HORVU1Hr1G040660.30 , HORVU1Hr1G040660.33 , HORVU1Hr1G040660.29 , HORVU1Hr1G040660.27
Wheat TraesCS6B02G255900 , TraesCS6A02G225800 , TraesCS1D02G150000 , TraesCS6D02G209300 , TraesCS1A02G153000
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G126000 calmodulin binding protein, putative, expressed -
2 Sobic.001G303750 - -
3 Sobic.008G087300 3-oxoacyl-reductase, chloroplast precursor, putative, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
4 Sobic.004G167000 POEI29 - Pollen Ole e I allergen and extensin family protein precursor, putative, expressed -
5 Sobic.008G008200 TMS membrane protein/tumour differentially expressed protein, putative, expressed -
6 Sobic.001G266900 LTPL37 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
7 Sobic.010G180000 - -
8 Sobic.007G175400 carrier, putative, expressed -
9 Sobic.009G239800 DUF538 domain containing protein, putative, expressed -
10 Sobic.002G332300 expressed protein -
11 Sobic.002G129500 LTPL61 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -
12 Sobic.010G159500 LTPL5 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -
13 Sobic.009G069100 dolichol phosphate-mannose biosynthesis regulatory protein, putative, expressed K09658: dolichol phosphate-mannose biosynthesis regulatory protein
14 Sobic.003G239400 wax synthase isoform 3, putative, expressed -
15 Sobic.008G138300 expressed protein -
16 Sobic.003G040400 cytochrome P450, putative, expressed -
17 Sobic.010G124500 estradiol 17-beta-dehydrogenase 12, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
18 Sobic.007G073300 OsSCP38 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
19 Sobic.007G064600 cytochrome P450, putative, expressed -
20 Sobic.005G135800 chalcone and stilbene synthases, putative, expressed -


Gene co-expression network
sample Sobic004G218700 Sobic004G218700 Sobic008G126000 Sobic008G126000 Sobic004G218700--Sobic008G126000 Sobic001G303750 Sobic001G303750 Sobic004G218700--Sobic001G303750 Sobic008G087300 Sobic008G087300 Sobic004G218700--Sobic008G087300 Sobic004G167000 Sobic004G167000 Sobic004G218700--Sobic004G167000 Sobic008G008200 Sobic008G008200 Sobic004G218700--Sobic008G008200 Sobic001G266900 Sobic001G266900 Sobic004G218700--Sobic001G266900 Sobic010G180000 Sobic010G180000 Sobic004G218700--Sobic010G180000 Sobic007G175400 Sobic007G175400 Sobic004G218700--Sobic007G175400 Sobic009G239800 Sobic009G239800 Sobic004G218700--Sobic009G239800 Sobic008G126000--Sobic010G180000 Sobic008G126000--Sobic001G266900 Sobic009G069100 Sobic009G069100 Sobic008G126000--Sobic009G069100 Sobic008G138300 Sobic008G138300 Sobic008G126000--Sobic008G138300 Sobic003G040400 Sobic003G040400 Sobic008G126000--Sobic003G040400 Sobic008G126000--Sobic004G167000 Sobic010G159500 Sobic010G159500 Sobic008G126000--Sobic010G159500 Sobic008G126000--Sobic008G087300 Sobic003G239400 Sobic003G239400 Sobic008G126000--Sobic003G239400 Sobic001G303750--Sobic009G239800 Sobic001G303750--Sobic008G008200 Sobic001G303750--Sobic008G087300 Sobic001G303750--Sobic004G167000 Sobic001G303750--Sobic001G266900 Sobic002G129500 Sobic002G129500 Sobic001G303750--Sobic002G129500 Sobic002G129700 Sobic002G129700 Sobic001G303750--Sobic002G129700 Sobic007G064600 Sobic007G064600 Sobic001G303750--Sobic007G064600 Sobic001G303750--Sobic010G180000 Sobic008G087300--Sobic004G167000 Sobic008G087300--Sobic001G266900 Sobic008G087300--Sobic008G008200 Sobic008G087300--Sobic010G180000 Sobic008G087300--Sobic008G138300 Sobic008G087300--Sobic010G159500 Sobic008G087300--Sobic009G239800 Sobic008G087300--Sobic003G239400 Sobic008G087300--Sobic008G126000 Sobic004G167000--Sobic008G087300 Sobic004G167000--Sobic001G266900 Sobic004G167000--Sobic008G008200 Sobic004G167000--Sobic010G180000 Sobic004G167000--Sobic008G138300 Sobic004G167000--Sobic010G159500 Sobic004G167000--Sobic007G064600 Sobic004G167000--Sobic003G239400 Sobic004G167000--Sobic003G040400 Sobic008G008200--Sobic008G087300 Sobic008G008200--Sobic004G167000 Sobic008G008200--Sobic010G180000 Sobic008G008200--Sobic001G266900 Sobic008G008200--Sobic009G239800 Sobic007G068700 Sobic007G068700 Sobic008G008200--Sobic007G068700 Sobic008G008200--Sobic008G138300 Sobic003G162500 Sobic003G162500 Sobic008G008200--Sobic003G162500 Sobic008G008200--Sobic010G159500 Sobic001G266900--Sobic004G167000 Sobic001G266900--Sobic008G138300 Sobic001G266900--Sobic008G087300 Sobic001G266900--Sobic010G159500 Sobic001G266900--Sobic003G239400 Sobic009G116300 Sobic009G116300 Sobic001G266900--Sobic009G116300 Sobic003G206000 Sobic003G206000 Sobic001G266900--Sobic003G206000 Sobic010G200000 Sobic010G200000 Sobic001G266900--Sobic010G200000 Sobic001G332050 Sobic001G332050 Sobic001G266900--Sobic001G332050 Sobic010G180000--Sobic008G138300 Sobic010G180000--Sobic001G266900 Sobic010G180000--Sobic003G162500 Sobic010G180000--Sobic008G008200 Sobic010G180000--Sobic004G167000 Sobic004G090700 Sobic004G090700 Sobic010G180000--Sobic004G090700 Sobic003G206200 Sobic003G206200 Sobic010G180000--Sobic003G206200 Sobic004G159200 Sobic004G159200 Sobic010G180000--Sobic004G159200 Sobic010G180000--Sobic008G087300 Sobic010G152900 Sobic010G152900 Sobic007G175400--Sobic010G152900 Sobic007G175400--Sobic003G040400 Sobic007G175400--Sobic009G116300 Sobic007G175400--Sobic001G332050 Sobic009G239800--Sobic008G008200 Sobic009G239800--Sobic008G087300 Sobic009G239800--Sobic004G167000 Sobic009G239800--Sobic001G303750 Sobic009G239800--Sobic010G180000 Sobic009G239800--Sobic001G266900 Sobic009G239800--Sobic007G068700 Sobic010G108100 Sobic010G108100 Sobic009G239800--Sobic010G108100 Sobic009G239800--Sobic008G138300
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.