Gene annotation
Transcriptome id Sobic.005G004000.1
Synonym Sb05g000480
Functional annotation MYB family transcription factor, putative, expressed
UniProt C5Y2Z4
Pfam PF00249
Panther DB PTHR31314 PTHR31314:SF18
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G40260 : Homeodomain-like superfamily protein
RAP-DB (Rice) LOC_Os11g01480.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a013215
Brachypodium KQJ92636
Barley -
Wheat TraesCS4D02G131500 , TraesCS4A02G180900 , TraesCS4B02G136900 , TraesCS5D02G158300 , TraesCS5A02G153000 , TraesCS5B02G151800
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G038800 Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
2 Sobic.002G035000 OsGrx_C10 - glutaredoxin subgroup III, expressed K03676: grxC, GLRX, glutaredoxin 3
3 Sobic.005G042200 homeobox domain containing protein, expressed -
4 Sobic.002G380800 - -
5 Sobic.002G410600 - -
6 Sobic.008G004200 MYB family transcription factor, putative, expressed -
7 Sobic.003G038700 Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
8 Sobic.007G206000 dihydroflavonol-4-reductase, putative, expressed -
9 Sobic.005G200700 dirigent, putative, expressed -
10 Sobic.009G046000 desiccation-related protein PCC13-62 precursor, putative, expressed -
11 Sobic.010G053300 expressed protein -
12 Sobic.010G049600 expressed protein -
13 Sobic.006G089700 LTPL94 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
14 Sobic.001G491400 cytochrome P450, putative, expressed -
15 Sobic.002G251200 dihydroflavonol-4-reductase, putative, expressed -
16 Sobic.007G029900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
17 Sobic.004G118100 harpin-induced protein 1 domain containing protein, expressed -
18 Sobic.002G399600 LTPL2 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
19 Sobic.010G215700 A tissue specific expression in primordial inflorescences(PubMedID : 27501690)@OsSPL10 - SBP-box gene family member, expressed -
20 Sobic.003G271700 - -


Gene co-expression network
sample Sobic005G004000 Sobic005G004000 Sobic003G038800 Sobic003G038800 Sobic005G004000--Sobic003G038800 Sobic002G035000 Sobic002G035000 Sobic005G004000--Sobic002G035000 Sobic005G042200 Sobic005G042200 Sobic005G004000--Sobic005G042200 Sobic002G380800 Sobic002G380800 Sobic005G004000--Sobic002G380800 Sobic002G410600 Sobic002G410600 Sobic005G004000--Sobic002G410600 Sobic008G004200 Sobic008G004200 Sobic005G004000--Sobic008G004200 Sobic003G038700 Sobic003G038700 Sobic005G004000--Sobic003G038700 Sobic007G206000 Sobic007G206000 Sobic005G004000--Sobic007G206000 Sobic005G200700 Sobic005G200700 Sobic005G004000--Sobic005G200700 Sobic003G038800--Sobic002G410600 Sobic003G038800--Sobic003G038700 Sobic003G038800--Sobic002G380800 Sobic003G038800--Sobic007G206000 Sobic009G046000 Sobic009G046000 Sobic003G038800--Sobic009G046000 Sobic003G038800--Sobic005G200700 Sobic001G133200 Sobic001G133200 Sobic003G038800--Sobic001G133200 Sobic002G035000--Sobic002G380800 Sobic002G035000--Sobic003G038800 Sobic002G035000--Sobic009G046000 Sobic002G035000--Sobic002G410600 Sobic002G035000--Sobic003G038700 Sobic006G151800 Sobic006G151800 Sobic002G035000--Sobic006G151800 Sobic002G035000--Sobic005G042200 Sobic002G035000--Sobic007G206000 Sobic005G090100 Sobic005G090100 Sobic002G035000--Sobic005G090100 Sobic010G215700 Sobic010G215700 Sobic005G042200--Sobic010G215700 Sobic005G042200--Sobic006G151800 Sobic005G042200--Sobic002G380800 Sobic005G042200--Sobic002G410600 Sobic005G042200--Sobic003G038700 Sobic001G334501 Sobic001G334501 Sobic005G042200--Sobic001G334501 Sobic005G042200--Sobic003G038800 Sobic002G251200 Sobic002G251200 Sobic005G042200--Sobic002G251200 Sobic005G042200--Sobic009G046000 Sobic002G380800--Sobic003G038800 Sobic002G380800--Sobic002G410600 Sobic002G380800--Sobic003G038700 Sobic002G380800--Sobic002G035000 Sobic009G075000 Sobic009G075000 Sobic002G380800--Sobic009G075000 Sobic002G380800--Sobic006G151800 Sobic010G189366 Sobic010G189366 Sobic002G380800--Sobic010G189366 Sobic004G349150 Sobic004G349150 Sobic002G380800--Sobic004G349150 Sobic002G380800--Sobic009G046000 Sobic002G410600--Sobic003G038700 Sobic003G263800 Sobic003G263800 Sobic002G410600--Sobic003G263800 Sobic007G098600 Sobic007G098600 Sobic002G410600--Sobic007G098600 Sobic002G427550 Sobic002G427550 Sobic002G410600--Sobic002G427550 Sobic002G410600--Sobic001G133200 Sobic008G004200--Sobic001G334501 Sobic004G227900 Sobic004G227900 Sobic008G004200--Sobic004G227900 Sobic008G004200--Sobic005G200700 Sobic001G491400 Sobic001G491400 Sobic008G004200--Sobic001G491400 Sobic010G049600 Sobic010G049600 Sobic008G004200--Sobic010G049600 Sobic008G004200--Sobic010G215700 Sobic001G366000 Sobic001G366000 Sobic008G004200--Sobic001G366000 Sobic002G399600 Sobic002G399600 Sobic008G004200--Sobic002G399600 Sobic008G004200--Sobic002G410600 Sobic003G038700--Sobic002G410600 Sobic003G038700--Sobic001G133200 Sobic007G206000--Sobic003G038700 Sobic005G226500 Sobic005G226500 Sobic007G206000--Sobic005G226500 Sobic007G206000--Sobic002G410600 Sobic010G236000 Sobic010G236000 Sobic007G206000--Sobic010G236000 Sobic008G032400 Sobic008G032400 Sobic007G206000--Sobic008G032400 Sobic006G006900 Sobic006G006900 Sobic007G206000--Sobic006G006900 Sobic007G206000--Sobic007G098600 Sobic007G037400 Sobic007G037400 Sobic007G206000--Sobic007G037400 Sobic007G107500 Sobic007G107500 Sobic007G206000--Sobic007G107500 Sobic005G200700--Sobic002G399600 Sobic005G200700--Sobic007G107500 Sobic005G200700--Sobic005G226500 Sobic005G200700--Sobic007G037400 Sobic002G270400 Sobic002G270400 Sobic005G200700--Sobic002G270400 Sobic010G187400 Sobic010G187400 Sobic005G200700--Sobic010G187400 Sobic005G200700--Sobic001G334501 Sobic005G200700--Sobic006G006900 Sobic007G000600 Sobic007G000600 Sobic005G200700--Sobic007G000600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.