Gene annotation
Transcriptome id Sobic.005G062100.1
Synonym
Functional annotation -
UniProt A0A1B6PQI0
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G015800 "1,4-alpha-glucan branching enzyme/starch branching enzyme II, PULLULANASE 1, CHLOROPLASTIC"(PubMedID : 21853065)@Alpha amylase, catalytic domain containing protein, expressed -
2 Sobic.001G225000 RWD domain containing protein, expressed -
3 Sobic.005G082300 - -
4 Sobic.002G172200 receptor-like protein kinase 5 precursor, putative, expressed -
5 Sobic.001G274025 - -
6 Sobic.002G172100 receptor-like protein kinase 5 precursor, putative, expressed -
7 Sobic.001G371600 - -
8 Sobic.006G264800 GASR6 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, expressed -
9 Sobic.008G109600 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed -
10 Sobic.007G172100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@vignain precursor, putative, expressed K16292: CEP, KDEL-tailed cysteine endopeptidase
11 Sobic.009G021400 Jacalin-like lectin domain containing protein, putative, expressed -
12 Sobic.010G020100 beta-glucan-binding protein 4, putative, expressed K01180: endo-1,3(4)-beta-glucanase
13 Sobic.001G489075 - -
14 Sobic.002G409300 expressed protein -
15 Sobic.004G212350 - -
16 Sobic.003G294800 plastocyanin-like domain containing protein, putative, expressed -
17 Sobic.003G106400 3-beta-hydroxysteroid-Delta-isomerase, putative, expressed K01824: cholestenol Delta-isomerase
18 Sobic.005G188800 - -
19 Sobic.009G112200 OsFBX361 - F-box domain containing protein, expressed -
20 Sobic.005G147500 - -


Gene co-expression network
sample Sobic005G062100 Sobic005G062100 Sobic006G015800 Sobic006G015800 Sobic005G062100--Sobic006G015800 Sobic001G225000 Sobic001G225000 Sobic005G062100--Sobic001G225000 Sobic005G082300 Sobic005G082300 Sobic005G062100--Sobic005G082300 Sobic002G172200 Sobic002G172200 Sobic005G062100--Sobic002G172200 Sobic001G274025 Sobic001G274025 Sobic005G062100--Sobic001G274025 Sobic002G172100 Sobic002G172100 Sobic005G062100--Sobic002G172100 Sobic001G371600 Sobic001G371600 Sobic005G062100--Sobic001G371600 Sobic006G264800 Sobic006G264800 Sobic005G062100--Sobic006G264800 Sobic008G109600 Sobic008G109600 Sobic005G062100--Sobic008G109600 Sobic003G092600 Sobic003G092600 Sobic006G015800--Sobic003G092600 Sobic004G212350 Sobic004G212350 Sobic006G015800--Sobic004G212350 Sobic006G015800--Sobic005G082300 Sobic006G015800--Sobic002G172200 Sobic002G100000 Sobic002G100000 Sobic006G015800--Sobic002G100000 Sobic004G322901 Sobic004G322901 Sobic006G015800--Sobic004G322901 Sobic006G015800--Sobic001G371600 Sobic005G032500 Sobic005G032500 Sobic006G015800--Sobic005G032500 Sobic001G489075 Sobic001G489075 Sobic006G015800--Sobic001G489075 Sobic006G081400 Sobic006G081400 Sobic001G225000--Sobic006G081400 Sobic005G188800 Sobic005G188800 Sobic001G225000--Sobic005G188800 Sobic004G029800 Sobic004G029800 Sobic001G225000--Sobic004G029800 Sobic005G185400 Sobic005G185400 Sobic001G225000--Sobic005G185400 Sobic005G033400 Sobic005G033400 Sobic001G225000--Sobic005G033400 Sobic005G147500 Sobic005G147500 Sobic001G225000--Sobic005G147500 Sobic009G057100 Sobic009G057100 Sobic001G225000--Sobic009G057100 Sobic003G294800 Sobic003G294800 Sobic001G225000--Sobic003G294800 Sobic005G184500 Sobic005G184500 Sobic001G225000--Sobic005G184500 Sobic005G082300--Sobic002G172200 Sobic005G082300--Sobic003G294800 Sobic005G082300--Sobic002G172100 Sobic005G082300--Sobic005G188800 Sobic003G266100 Sobic003G266100 Sobic005G082300--Sobic003G266100 Sobic005G082300--Sobic005G147500 Sobic001G511400 Sobic001G511400 Sobic005G082300--Sobic001G511400 Sobic005G082300--Sobic009G057100 Sobic005G082300--Sobic006G081400 Sobic002G172200--Sobic005G082300 Sobic002G172200--Sobic002G172100 Sobic002G172200--Sobic003G266100 Sobic002G172200--Sobic001G511400 Sobic002G172200--Sobic003G294800 Sobic002G172200--Sobic005G147500 Sobic002G015400 Sobic002G015400 Sobic002G172200--Sobic002G015400 Sobic002G172200--Sobic005G188800 Sobic001G284700 Sobic001G284700 Sobic002G172200--Sobic001G284700 Sobic001G274025--Sobic006G264800 Sobic009G021400 Sobic009G021400 Sobic001G274025--Sobic009G021400 Sobic003G106400 Sobic003G106400 Sobic001G274025--Sobic003G106400 Sobic002G409300 Sobic002G409300 Sobic001G274025--Sobic002G409300 Sobic001G274025--Sobic003G294800 Sobic001G274025--Sobic002G172100 Sobic001G274025--Sobic001G489075 Sobic009G112200 Sobic009G112200 Sobic001G274025--Sobic009G112200 Sobic001G274025--Sobic005G188800 Sobic002G172100--Sobic003G294800 Sobic002G172100--Sobic006G264800 Sobic002G172100--Sobic002G172200 Sobic002G172100--Sobic005G147500 Sobic002G172100--Sobic005G082300 Sobic002G172100--Sobic003G266100 Sobic009G058300 Sobic009G058300 Sobic002G172100--Sobic009G058300 Sobic002G172100--Sobic001G284700 Sobic002G172100--Sobic001G274025 Sobic001G371600--Sobic005G082300 Sobic001G371600--Sobic002G172200 Sobic001G371600--Sobic005G147500 Sobic001G371600--Sobic002G172100 Sobic001G371600--Sobic009G057100 Sobic001G371600--Sobic009G058300 Sobic001G371600--Sobic001G284700 Sobic001G371600--Sobic006G264800 Sobic001G371600--Sobic005G188800 Sobic006G264800--Sobic001G274025 Sobic006G264800--Sobic002G172100 Sobic006G264800--Sobic009G021400 Sobic006G264800--Sobic001G489075 Sobic006G264800--Sobic003G294800 Sobic006G264800--Sobic009G112200 Sobic006G264800--Sobic003G106400 Sobic006G264800--Sobic009G058300 Sobic006G264800--Sobic001G284700 Sobic008G109600--Sobic003G294800 Sobic008G109600--Sobic005G188800 Sobic008G109600--Sobic002G172100 Sobic008G109600--Sobic003G266100 Sobic008G109600--Sobic006G264800 Sobic008G109600--Sobic002G172200 Sobic008G109600--Sobic001G274025 Sobic008G109600--Sobic005G082300 Sobic008G109600--Sobic009G021400
Octagon: transcription factors


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