Gene annotation
Transcriptome id Sobic.005G105850.1
Synonym -
Functional annotation -
UniProt A0A1Z5RHS9
Pfam PF00450
Panther DB PTHR11802 PTHR11802:SF53
NCBI CDD -
KEGG Orthology K16296; serine carboxypeptidase-like clade I
Gene Ontology GO:0006508; proteolysis GO:0004185serine-type carboxypeptidase activity


Orthologs (automatic annotation)
TAIR AT5G09640 : serine carboxypeptidase-like 19
RAP-DB (Rice) LOC_Os11g27264.1 : OsSCP60 - Putative Serine Carboxypeptidase homologue, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G166600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@copper/zinc superoxide dismutase, putative, expressed K04565: superoxide dismutase, Cu-Zn family
2 Sobic.005G165400 OsSub17 - Putative Subtilisin homologue, expressed -
3 Sobic.010G202700 AP2 domain containing protein, expressed K09284: AP2-like factor, euAP2 lineage
4 Sobic.002G102700 cytochrome P450, putative, expressed -
5 Sobic.006G147500 DUF640 domain containing protein, putative, expressed -
6 Sobic.006G001400 Leucine Rich Repeat family protein, expressed -
7 Sobic.006G084500 expressed protein -
8 Sobic.001G188600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Rf1, mitochondrial precursor, putative, expressed -
9 Sobic.005G218201 - -
10 Sobic.007G090415 - -
11 Sobic.005G020200 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
12 Sobic.008G130700 expressed protein -
13 Sobic.007G211100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA methyltransferase, TrmH family protein, putative, expressed K03216: trmL, tRNA (cytidine/uridine-2'-O-)-methyltransferase
14 Sobic.005G218600 NBS-LRR disease resistance protein, putative, expressed -
15 Sobic.005G141000 plant protein of unknown function domain containing protein, expressed -
16 Sobic.003G157500 oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed -
17 Sobic.001G012300 "similar to Cytochrome P450 79A1, up-regulated under drought stress "(PubMedID : 24655390)@similar to Cytochrome P450 79A1(PubMedID : 24655390)@protein and mRNA level correlates with dhurrin amount(PubMedID : 12114576)@Tyrosine N-monooxygenase(PubMedID : 27964718)@"Tyrosine N-monooxygenase, conversion of L-tyrosine to p-hydroxyphenylacetaldehyde oxime, ER"(PubMedID : 21880107)@"Tyrosine N-monooxygenase, conversion of L-tyrosine to p-hydroxyphenylacetaldehyde oxime, ER"(PubMedID : 26361733)@cytochrome P450, putative, expressed K13027: tyrosine N-monooxygenase
18 Sobic.003G082900 transferase family protein, putative, expressed -
19 Sobic.003G068300 transferase family protein, putative, expressed -
20 Sobic.001G069500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GTP-binding protein, putative, expressed K06942: ribosome-binding ATPase


Gene co-expression network
sample Sobic005G105850 Sobic005G105850 Sobic007G166600 Sobic007G166600 Sobic005G105850--Sobic007G166600 Sobic005G165400 Sobic005G165400 Sobic005G105850--Sobic005G165400 Sobic010G202700 Sobic010G202700 Sobic005G105850--Sobic010G202700 Sobic002G102700 Sobic002G102700 Sobic005G105850--Sobic002G102700 Sobic006G147500 Sobic006G147500 Sobic005G105850--Sobic006G147500 Sobic006G001400 Sobic006G001400 Sobic005G105850--Sobic006G001400 Sobic006G084500 Sobic006G084500 Sobic005G105850--Sobic006G084500 Sobic001G188600 Sobic001G188600 Sobic005G105850--Sobic001G188600 Sobic005G218201 Sobic005G218201 Sobic005G105850--Sobic005G218201 Sobic008G135701 Sobic008G135701 Sobic007G166600--Sobic008G135701 Sobic004G319800 Sobic004G319800 Sobic007G166600--Sobic004G319800 Sobic009G055900 Sobic009G055900 Sobic007G166600--Sobic009G055900 Sobic001G104300 Sobic001G104300 Sobic007G166600--Sobic001G104300 Sobic005G022000 Sobic005G022000 Sobic007G166600--Sobic005G022000 Sobic007G026200 Sobic007G026200 Sobic007G166600--Sobic007G026200 Sobic007G166600--Sobic005G105850 Sobic007G211100 Sobic007G211100 Sobic007G166600--Sobic007G211100 Sobic007G166600--Sobic010G202700 Sobic002G415400 Sobic002G415400 Sobic005G165400--Sobic002G415400 Sobic002G415300 Sobic002G415300 Sobic005G165400--Sobic002G415300 Sobic003G068300 Sobic003G068300 Sobic005G165400--Sobic003G068300 Sobic009G115050 Sobic009G115050 Sobic005G165400--Sobic009G115050 Sobic002G329500 Sobic002G329500 Sobic005G165400--Sobic002G329500 Sobic008G163200 Sobic008G163200 Sobic005G165400--Sobic008G163200 Sobic001G435600 Sobic001G435600 Sobic005G165400--Sobic001G435600 Sobic004G060700 Sobic004G060700 Sobic005G165400--Sobic004G060700 Sobic008G123600 Sobic008G123600 Sobic005G165400--Sobic008G123600 Sobic010G202700--Sobic006G001400 Sobic005G196500 Sobic005G196500 Sobic010G202700--Sobic005G196500 Sobic007G037700 Sobic007G037700 Sobic010G202700--Sobic007G037700 Sobic006G233600 Sobic006G233600 Sobic010G202700--Sobic006G233600 Sobic010G202700--Sobic001G188600 Sobic010G202700--Sobic006G147500 Sobic010G107200 Sobic010G107200 Sobic010G202700--Sobic010G107200 Sobic001G172300 Sobic001G172300 Sobic010G202700--Sobic001G172300 Sobic001G275800 Sobic001G275800 Sobic010G202700--Sobic001G275800 Sobic002G102700--Sobic006G147500 Sobic005G095640 Sobic005G095640 Sobic002G102700--Sobic005G095640 Sobic004G019300 Sobic004G019300 Sobic002G102700--Sobic004G019300 Sobic002G102700--Sobic003G068300 Sobic002G102700--Sobic007G211100 Sobic002G102700--Sobic010G202700 Sobic002G102700--Sobic001G188600 Sobic008G067400 Sobic008G067400 Sobic002G102700--Sobic008G067400 Sobic002G102700--Sobic005G165400 Sobic006G147500--Sobic002G102700 Sobic006G147500--Sobic001G188600 Sobic002G020100 Sobic002G020100 Sobic006G147500--Sobic002G020100 Sobic006G147500--Sobic007G211100 Sobic006G147500--Sobic010G202700 Sobic001G069500 Sobic001G069500 Sobic006G147500--Sobic001G069500 Sobic006G147500--Sobic008G067400 Sobic004G109000 Sobic004G109000 Sobic006G147500--Sobic004G109000 Sobic006G147500--Sobic003G068300 Sobic006G001400--Sobic005G196500 Sobic004G001200 Sobic004G001200 Sobic006G001400--Sobic004G001200 Sobic009G059100 Sobic009G059100 Sobic006G001400--Sobic009G059100 Sobic005G020200 Sobic005G020200 Sobic006G001400--Sobic005G020200 Sobic010G124200 Sobic010G124200 Sobic006G001400--Sobic010G124200 Sobic003G157500 Sobic003G157500 Sobic006G001400--Sobic003G157500 Sobic006G001400--Sobic006G233600 Sobic006G172700 Sobic006G172700 Sobic006G001400--Sobic006G172700 Sobic005G056201 Sobic005G056201 Sobic006G001400--Sobic005G056201 Sobic006G084500--Sobic008G123600 Sobic006G084500--Sobic002G020100 Sobic001G003600 Sobic001G003600 Sobic006G084500--Sobic001G003600 Sobic006G084500--Sobic006G172700 Sobic006G084500--Sobic001G069500 Sobic004G076000 Sobic004G076000 Sobic006G084500--Sobic004G076000 Sobic007G090424 Sobic007G090424 Sobic006G084500--Sobic007G090424 Sobic006G084500--Sobic005G056201 Sobic006G084500--Sobic009G059100 Sobic001G188600--Sobic001G069500 Sobic006G114300 Sobic006G114300 Sobic001G188600--Sobic006G114300 Sobic001G357200 Sobic001G357200 Sobic001G188600--Sobic001G357200 Sobic009G098100 Sobic009G098100 Sobic001G188600--Sobic009G098100 Sobic010G012900 Sobic010G012900 Sobic001G188600--Sobic010G012900 Sobic001G188600--Sobic004G109000 Sobic001G188600--Sobic007G211100 Sobic004G253800 Sobic004G253800 Sobic001G188600--Sobic004G253800 Sobic008G030000 Sobic008G030000 Sobic001G188600--Sobic008G030000 Sobic005G218600 Sobic005G218600 Sobic005G218201--Sobic005G218600 Sobic004G044200 Sobic004G044200 Sobic005G218201--Sobic004G044200 Sobic002G209800 Sobic002G209800 Sobic005G218201--Sobic002G209800 Sobic004G038300 Sobic004G038300 Sobic005G218201--Sobic004G038300 Sobic003G120500 Sobic003G120500 Sobic005G218201--Sobic003G120500 Sobic005G200600 Sobic005G200600 Sobic005G218201--Sobic005G200600 Sobic006G238100 Sobic006G238100 Sobic005G218201--Sobic006G238100 Sobic001G541300 Sobic001G541300 Sobic005G218201--Sobic001G541300 Sobic001G255300 Sobic001G255300 Sobic005G218201--Sobic001G255300
Octagon: transcription factors


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