Gene annotation
Transcriptome id Sobic.003G082900.3,Sobic.003G082900.2
Synonym HCT, Sb03g006970
Functional annotation transferase family protein, putative, expressed
UniProt C5XQT0
Pfam PF02458
Panther DB PTHR31642 PTHR31642:SF16
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016747; transferase activity, transferring acyl groups other than amino-acyl groups


Orthologs (automatic annotation)
TAIR AT5G48930 : hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase
RAP-DB (Rice) LOC_Os08g43040.2 : transferase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a023571 , Zm00025a023574 , Zm00025a023575
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G084500 expressed protein -
2 Sobic.007G116100 thioredoxin, putative, expressed -
3 Sobic.003G157500 oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed -
4 Sobic.005G020200 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
5 Sobic.002G190800 expressed protein -
6 Sobic.006G001400 Leucine Rich Repeat family protein, expressed -
7 Sobic.006G025700 - -
8 Sobic.001G228300 SAP domain containing protein, expressed -
9 Sobic.002G190100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.003G176200 - -
11 Sobic.001G188600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Rf1, mitochondrial precursor, putative, expressed -
12 Sobic.009G059100 Cupin domain containing protein, expressed -
13 Sobic.008G130700 expressed protein -
14 Sobic.002G124100 - -
15 Sobic.005G056201 - -
16 Sobic.004G253800 - -
17 Sobic.006G263800 HAD-superfamily hydrolase subfamily IA, variant 3, putative, expressed -
18 Sobic.001G120000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed -
19 Sobic.001G069500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GTP-binding protein, putative, expressed K06942: ribosome-binding ATPase
20 Sobic.009G098100 T-complex protein, putative, expressed -


Gene co-expression network
sample Sobic003G082900 Sobic003G082900 Sobic006G084500 Sobic006G084500 Sobic003G082900--Sobic006G084500 Sobic007G116100 Sobic007G116100 Sobic003G082900--Sobic007G116100 Sobic003G157500 Sobic003G157500 Sobic003G082900--Sobic003G157500 Sobic005G020200 Sobic005G020200 Sobic003G082900--Sobic005G020200 Sobic002G190800 Sobic002G190800 Sobic003G082900--Sobic002G190800 Sobic006G001400 Sobic006G001400 Sobic003G082900--Sobic006G001400 Sobic006G025700 Sobic006G025700 Sobic003G082900--Sobic006G025700 Sobic001G228300 Sobic001G228300 Sobic003G082900--Sobic001G228300 Sobic002G190100 Sobic002G190100 Sobic003G082900--Sobic002G190100 Sobic008G123600 Sobic008G123600 Sobic006G084500--Sobic008G123600 Sobic002G020100 Sobic002G020100 Sobic006G084500--Sobic002G020100 Sobic001G003600 Sobic001G003600 Sobic006G084500--Sobic001G003600 Sobic006G172700 Sobic006G172700 Sobic006G084500--Sobic006G172700 Sobic001G069500 Sobic001G069500 Sobic006G084500--Sobic001G069500 Sobic004G076000 Sobic004G076000 Sobic006G084500--Sobic004G076000 Sobic007G090424 Sobic007G090424 Sobic006G084500--Sobic007G090424 Sobic005G056201 Sobic005G056201 Sobic006G084500--Sobic005G056201 Sobic009G059100 Sobic009G059100 Sobic006G084500--Sobic009G059100 Sobic010G027200 Sobic010G027200 Sobic007G116100--Sobic010G027200 Sobic001G281500 Sobic001G281500 Sobic007G116100--Sobic001G281500 Sobic002G140000 Sobic002G140000 Sobic007G116100--Sobic002G140000 Sobic006G263800 Sobic006G263800 Sobic007G116100--Sobic006G263800 Sobic001G099000 Sobic001G099000 Sobic007G116100--Sobic001G099000 Sobic007G015300 Sobic007G015300 Sobic007G116100--Sobic007G015300 Sobic006G237100 Sobic006G237100 Sobic007G116100--Sobic006G237100 Sobic004G338300 Sobic004G338300 Sobic007G116100--Sobic004G338300 Sobic005G022800 Sobic005G022800 Sobic007G116100--Sobic005G022800 Sobic003G157500--Sobic006G025700 Sobic003G157500--Sobic009G059100 Sobic003G157500--Sobic005G020200 Sobic004G253800 Sobic004G253800 Sobic003G157500--Sobic004G253800 Sobic003G157500--Sobic002G020100 Sobic003G157500--Sobic005G056201 Sobic003G157500--Sobic001G003600 Sobic005G200600 Sobic005G200600 Sobic003G157500--Sobic005G200600 Sobic004G109000 Sobic004G109000 Sobic003G157500--Sobic004G109000 Sobic005G020200--Sobic003G157500 Sobic005G020200--Sobic009G059100 Sobic005G020200--Sobic005G200600 Sobic005G020200--Sobic004G253800 Sobic005G020200--Sobic006G001400 Sobic005G020200--Sobic005G056201 Sobic005G141000 Sobic005G141000 Sobic005G020200--Sobic005G141000 Sobic005G020200--Sobic006G025700 Sobic008G130700 Sobic008G130700 Sobic005G020200--Sobic008G130700 Sobic004G044000 Sobic004G044000 Sobic002G190800--Sobic004G044000 Sobic010G012900 Sobic010G012900 Sobic002G190800--Sobic010G012900 Sobic001G172300 Sobic001G172300 Sobic002G190800--Sobic001G172300 Sobic007G034500 Sobic007G034500 Sobic002G190800--Sobic007G034500 Sobic001G383900 Sobic001G383900 Sobic002G190800--Sobic001G383900 Sobic003G392000 Sobic003G392000 Sobic002G190800--Sobic003G392000 Sobic001G120000 Sobic001G120000 Sobic002G190800--Sobic001G120000 Sobic001G357200 Sobic001G357200 Sobic002G190800--Sobic001G357200 Sobic001G188600 Sobic001G188600 Sobic002G190800--Sobic001G188600 Sobic005G196500 Sobic005G196500 Sobic006G001400--Sobic005G196500 Sobic004G001200 Sobic004G001200 Sobic006G001400--Sobic004G001200 Sobic006G001400--Sobic009G059100 Sobic006G001400--Sobic005G020200 Sobic010G124200 Sobic010G124200 Sobic006G001400--Sobic010G124200 Sobic006G001400--Sobic003G157500 Sobic006G233600 Sobic006G233600 Sobic006G001400--Sobic006G233600 Sobic006G001400--Sobic006G172700 Sobic006G001400--Sobic005G056201 Sobic006G025700--Sobic003G157500 Sobic006G025700--Sobic009G059100 Sobic006G025700--Sobic002G020100 Sobic006G025700--Sobic004G253800 Sobic006G025700--Sobic001G003600 Sobic006G025700--Sobic002G190100 Sobic001G435600 Sobic001G435600 Sobic006G025700--Sobic001G435600 Sobic006G025700--Sobic004G109000 Sobic003G096100 Sobic003G096100 Sobic006G025700--Sobic003G096100 Sobic001G395300 Sobic001G395300 Sobic001G228300--Sobic001G395300 Sobic002G045700 Sobic002G045700 Sobic001G228300--Sobic002G045700 Sobic001G138000 Sobic001G138000 Sobic001G228300--Sobic001G138000 Sobic001G228300--Sobic006G263800 Sobic001G228300--Sobic003G392000 Sobic001G228300--Sobic007G116100 Sobic001G228300--Sobic002G140000 Sobic003G283100 Sobic003G283100 Sobic001G228300--Sobic003G283100 Sobic006G110200 Sobic006G110200 Sobic001G228300--Sobic006G110200 Sobic002G190100--Sobic006G025700 Sobic002G190100--Sobic006G263800 Sobic002G190100--Sobic008G130700 Sobic002G242600 Sobic002G242600 Sobic002G190100--Sobic002G242600 Sobic001G027600 Sobic001G027600 Sobic002G190100--Sobic001G027600 Sobic002G190100--Sobic004G044000 Sobic002G190100--Sobic004G253800 Sobic002G190100--Sobic009G059100 Sobic002G190100--Sobic001G120000
Octagon: transcription factors


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