Gene annotation
Transcriptome id Sobic.005G230400.2
Synonym GRAS2, SCL14, ATGRAS2, Sb05g027786
Functional annotation SCARECROW, putative, expressed
UniProt A0A1Z5RK64
Pfam PF03514
Panther DB PTHR31636 PTHR31636:SF59
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G07530 : SCARECROW-like 14
RAP-DB (Rice) LOC_Os12g38490.1 : SCARECROW, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.005G230400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G090100 - -
2 Sobic.010G008900 kinesin motor domain containing protein, expressed K11498: centromeric protein E
3 Sobic.001G382700 inactive receptor kinase At2g26730 precursor, putative, expressed -
4 Sobic.001G144200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF581 domain containing protein, expressed -
5 Sobic.001G196000 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
6 Sobic.003G118100 EMB3013, putative, expressed K17545: serine/threonine-protein kinase ULK4
7 Sobic.010G104400 cysteine-rich repeat secretory protein precursor, putative, expressed -
8 Sobic.009G208900 expressed protein -
9 Sobic.002G191000 STE_MEKK_ste11_MAP3K.2 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
10 Sobic.004G066900 protein kinase family protein, putative, expressed -
11 Sobic.006G035600 Kinesin motor domain domain containing protein, expressed K10400: kinesin family member 15
12 Sobic.003G296500 leucine rich repeat family protein, putative, expressed -
13 Sobic.003G294500 dynamin family protein, putative, expressed -
14 Sobic.004G287700 expressed protein -
15 Sobic.009G181500 Up-reguralion under heat(PubMedID : 24916767)@cyclin, putative, expressed -
16 Sobic.007G139500 phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
17 Sobic.003G134201 - -
18 Sobic.001G170800 "Transport protein(Ortholog in rice:Huang et al., 2012)"(PubMedID : 31659835)@transport protein-related, putative, expressed -
19 Sobic.004G233700 glycosyl hydrolase family 3 protein, putative, expressed -
20 Sobic.001G301900 ZOS10-07 - C2H2 zinc finger protein, expressed -


Gene co-expression network
sample Sobic005G230400 Sobic005G230400 Sobic008G090100 Sobic008G090100 Sobic005G230400--Sobic008G090100 Sobic010G008900 Sobic010G008900 Sobic005G230400--Sobic010G008900 Sobic001G382700 Sobic001G382700 Sobic005G230400--Sobic001G382700 Sobic001G144200 Sobic001G144200 Sobic005G230400--Sobic001G144200 Sobic001G196000 Sobic001G196000 Sobic005G230400--Sobic001G196000 Sobic003G118100 Sobic003G118100 Sobic005G230400--Sobic003G118100 Sobic010G104400 Sobic010G104400 Sobic005G230400--Sobic010G104400 Sobic009G208900 Sobic009G208900 Sobic005G230400--Sobic009G208900 Sobic002G191000 Sobic002G191000 Sobic005G230400--Sobic002G191000 Sobic005G098900 Sobic005G098900 Sobic008G090100--Sobic005G098900 Sobic010G165900 Sobic010G165900 Sobic008G090100--Sobic010G165900 Sobic007G139500 Sobic007G139500 Sobic008G090100--Sobic007G139500 Sobic008G127550 Sobic008G127550 Sobic008G090100--Sobic008G127550 Sobic002G101100 Sobic002G101100 Sobic008G090100--Sobic002G101100 Sobic008G090100--Sobic005G230400 Sobic005G108225 Sobic005G108225 Sobic008G090100--Sobic005G108225 Sobic005G140100 Sobic005G140100 Sobic008G090100--Sobic005G140100 Sobic008G090100--Sobic001G196000 Sobic005G000500 Sobic005G000500 Sobic010G008900--Sobic005G000500 Sobic003G314900 Sobic003G314900 Sobic010G008900--Sobic003G314900 Sobic001G170800 Sobic001G170800 Sobic010G008900--Sobic001G170800 Sobic007G168900 Sobic007G168900 Sobic010G008900--Sobic007G168900 Sobic001G029800 Sobic001G029800 Sobic010G008900--Sobic001G029800 Sobic001G177900 Sobic001G177900 Sobic010G008900--Sobic001G177900 Sobic003G294500 Sobic003G294500 Sobic010G008900--Sobic003G294500 Sobic004G271300 Sobic004G271300 Sobic010G008900--Sobic004G271300 Sobic008G148000 Sobic008G148000 Sobic010G008900--Sobic008G148000 Sobic002G016400 Sobic002G016400 Sobic001G382700--Sobic002G016400 Sobic010G216600 Sobic010G216600 Sobic001G382700--Sobic010G216600 Sobic001G382700--Sobic003G314900 Sobic003G418300 Sobic003G418300 Sobic001G382700--Sobic003G418300 Sobic009G242501 Sobic009G242501 Sobic001G382700--Sobic009G242501 Sobic007G208100 Sobic007G208100 Sobic001G382700--Sobic007G208100 Sobic001G382700--Sobic003G294500 Sobic005G098400 Sobic005G098400 Sobic001G382700--Sobic005G098400 Sobic006G149300 Sobic006G149300 Sobic001G382700--Sobic006G149300 Sobic009G206500 Sobic009G206500 Sobic001G144200--Sobic009G206500 Sobic010G042600 Sobic010G042600 Sobic001G144200--Sobic010G042600 Sobic010G067800 Sobic010G067800 Sobic001G144200--Sobic010G067800 Sobic005G025900 Sobic005G025900 Sobic001G144200--Sobic005G025900 Sobic002G275500 Sobic002G275500 Sobic001G144200--Sobic002G275500 Sobic001G144200--Sobic002G191000 Sobic004G271500 Sobic004G271500 Sobic001G144200--Sobic004G271500 Sobic007G040301 Sobic007G040301 Sobic001G144200--Sobic007G040301 Sobic001G144200--Sobic003G118100 Sobic001G437500 Sobic001G437500 Sobic001G196000--Sobic001G437500 Sobic001G196000--Sobic007G139500 Sobic004G243800 Sobic004G243800 Sobic001G196000--Sobic004G243800 Sobic001G196000--Sobic009G206500 Sobic004G274800 Sobic004G274800 Sobic001G196000--Sobic004G274800 Sobic006G081000 Sobic006G081000 Sobic001G196000--Sobic006G081000 Sobic007G173000 Sobic007G173000 Sobic001G196000--Sobic007G173000 Sobic008G174966 Sobic008G174966 Sobic001G196000--Sobic008G174966 Sobic001G159800 Sobic001G159800 Sobic001G196000--Sobic001G159800 Sobic006G035600 Sobic006G035600 Sobic003G118100--Sobic006G035600 Sobic003G118100--Sobic002G191000 Sobic003G118100--Sobic010G008900 Sobic003G118100--Sobic008G148000 Sobic003G118100--Sobic005G000500 Sobic007G125300 Sobic007G125300 Sobic003G118100--Sobic007G125300 Sobic001G131300 Sobic001G131300 Sobic003G118100--Sobic001G131300 Sobic003G118100--Sobic003G294500 Sobic003G118100--Sobic001G029800 Sobic010G104400--Sobic002G016400 Sobic003G296500 Sobic003G296500 Sobic010G104400--Sobic003G296500 Sobic010G104400--Sobic006G149300 Sobic010G104400--Sobic007G208100 Sobic010G104400--Sobic001G177900 Sobic002G020500 Sobic002G020500 Sobic010G104400--Sobic002G020500 Sobic004G233700 Sobic004G233700 Sobic010G104400--Sobic004G233700 Sobic001G403200 Sobic001G403200 Sobic010G104400--Sobic001G403200 Sobic004G287700 Sobic004G287700 Sobic010G104400--Sobic004G287700 Sobic009G208900--Sobic004G233700 Sobic005G144600 Sobic005G144600 Sobic009G208900--Sobic005G144600 Sobic002G142200 Sobic002G142200 Sobic009G208900--Sobic002G142200 Sobic003G179500 Sobic003G179500 Sobic009G208900--Sobic003G179500 Sobic010G274000 Sobic010G274000 Sobic009G208900--Sobic010G274000 Sobic003G410600 Sobic003G410600 Sobic009G208900--Sobic003G410600 Sobic009G208900--Sobic007G168900 Sobic004G047100 Sobic004G047100 Sobic009G208900--Sobic004G047100 Sobic009G208900--Sobic001G177900 Sobic002G191000--Sobic003G118100 Sobic002G191000--Sobic006G035600 Sobic010G051100 Sobic010G051100 Sobic002G191000--Sobic010G051100 Sobic002G191000--Sobic001G029800 Sobic002G191000--Sobic010G008900 Sobic001G070300 Sobic001G070300 Sobic002G191000--Sobic001G070300 Sobic002G191000--Sobic010G274000 Sobic002G191000--Sobic004G271500 Sobic009G181500 Sobic009G181500 Sobic002G191000--Sobic009G181500
Octagon: transcription factors


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