Gene annotation
Transcriptome id Sobic.007G209700.1
Synonym
Functional annotation -
UniProt A0A1B6PIW4
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G307600 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
2 Sobic.002G234100 2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
3 Sobic.009G051201 - -
4 Sobic.007G123000 sex determination protein tasselseed-2, putative, expressed -
5 Sobic.010G181900 expressed protein -
6 Sobic.002G101200 zinc finger, C3HC4 type domain containing protein, expressed K10638: UHRF1, E3 ubiquitin-protein ligase UHRF1
7 Sobic.002G217000 expressed protein -
8 Sobic.001G297300 - -
9 Sobic.005G089101 - K08066: NFYC, nuclear transcription factor Y, gamma
10 Sobic.003G225800 AAA-type ATPase family protein, putative, expressed -
11 Sobic.003G378700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@DnaK family protein, putative, expressed K09490: HSPA5, endoplasmic reticulum chaperone BiP
12 Sobic.005G001500 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@Phylogenetic analysis of cloned SbDof genes along with other reported Dof proteins. The 3D structural prediction of SbDof proteins based on multiple threading method.(PubMedID : 22476870)@"PBF1(Ortholog in maize:Lang et al., 2014)"(PubMedID : 31659895)@Upregulated in response to drought and salt stress(PubMedID : 27230576)@dof zinc finger domain containing protein, putative, expressed -
13 Sobic.002G100000 OsFBL33 - F-box domain and LRR containing protein, expressed -
14 Sobic.005G197000 RNA recognition motif containing protein, putative, expressed K14411: RNA-binding protein Musashi
15 Sobic.003G355700 BBTI13 - Bowman-Birk type bran trypsin inhibitor precursor, expressed -
16 Sobic.003G213100 AAA-type ATPase family protein, putative, expressed -
17 Sobic.002G408700 OsFBX259 - F-box domain containing protein, expressed -
18 Sobic.007G122932 - -
19 Sobic.002G166800 RNA recognition motif containing protein, putative, expressed -
20 Sobic.010G010600 - -


Gene co-expression network
sample Sobic007G209700 Sobic007G209700 Sobic003G307600 Sobic003G307600 Sobic007G209700--Sobic003G307600 Sobic002G234100 Sobic002G234100 Sobic007G209700--Sobic002G234100 Sobic009G051201 Sobic009G051201 Sobic007G209700--Sobic009G051201 Sobic007G123000 Sobic007G123000 Sobic007G209700--Sobic007G123000 Sobic010G181900 Sobic010G181900 Sobic007G209700--Sobic010G181900 Sobic002G101200 Sobic002G101200 Sobic007G209700--Sobic002G101200 Sobic002G217000 Sobic002G217000 Sobic007G209700--Sobic002G217000 Sobic001G297300 Sobic001G297300 Sobic007G209700--Sobic001G297300 Sobic005G089101 Sobic005G089101 Sobic007G209700--Sobic005G089101 Sobic003G307600--Sobic010G181900 Sobic005G001500 Sobic005G001500 Sobic003G307600--Sobic005G001500 Sobic003G307600--Sobic005G089101 Sobic002G100000 Sobic002G100000 Sobic003G307600--Sobic002G100000 Sobic003G227800 Sobic003G227800 Sobic003G307600--Sobic003G227800 Sobic003G063900 Sobic003G063900 Sobic003G307600--Sobic003G063900 Sobic002G408700 Sobic002G408700 Sobic003G307600--Sobic002G408700 Sobic008G168400 Sobic008G168400 Sobic003G307600--Sobic008G168400 Sobic009G021300 Sobic009G021300 Sobic003G307600--Sobic009G021300 Sobic002G234100--Sobic007G209700 Sobic002G234100--Sobic009G051201 Sobic003G378700 Sobic003G378700 Sobic002G234100--Sobic003G378700 Sobic002G234100--Sobic003G307600 Sobic003G213100 Sobic003G213100 Sobic002G234100--Sobic003G213100 Sobic003G225800 Sobic003G225800 Sobic002G234100--Sobic003G225800 Sobic002G234100--Sobic002G217000 Sobic005G197000 Sobic005G197000 Sobic002G234100--Sobic005G197000 Sobic002G234100--Sobic002G101200 Sobic009G051201--Sobic003G213100 Sobic009G051201--Sobic003G225800 Sobic009G051201--Sobic002G101200 Sobic009G051201--Sobic002G217000 Sobic009G051201--Sobic005G197000 Sobic002G069800 Sobic002G069800 Sobic009G051201--Sobic002G069800 Sobic005G003100 Sobic005G003100 Sobic009G051201--Sobic005G003100 Sobic009G051201--Sobic007G209700 Sobic009G013200 Sobic009G013200 Sobic009G051201--Sobic009G013200 Sobic007G147300 Sobic007G147300 Sobic007G123000--Sobic007G147300 Sobic007G122932 Sobic007G122932 Sobic007G123000--Sobic007G122932 Sobic007G123000--Sobic009G021300 Sobic008G001700 Sobic008G001700 Sobic007G123000--Sobic008G001700 Sobic007G123000--Sobic005G001500 Sobic007G123000--Sobic002G408700 Sobic010G209300 Sobic010G209300 Sobic007G123000--Sobic010G209300 Sobic008G071900 Sobic008G071900 Sobic007G123000--Sobic008G071900 Sobic009G086800 Sobic009G086800 Sobic007G123000--Sobic009G086800 Sobic010G181900--Sobic008G168400 Sobic010G181900--Sobic002G100000 Sobic010G181900--Sobic005G089101 Sobic010G181900--Sobic003G307600 Sobic010G181900--Sobic003G063900 Sobic005G079300 Sobic005G079300 Sobic010G181900--Sobic005G079300 Sobic007G187100 Sobic007G187100 Sobic010G181900--Sobic007G187100 Sobic004G212350 Sobic004G212350 Sobic010G181900--Sobic004G212350 Sobic002G381600 Sobic002G381600 Sobic010G181900--Sobic002G381600 Sobic002G101200--Sobic002G217000 Sobic005G032500 Sobic005G032500 Sobic002G101200--Sobic005G032500 Sobic002G058900 Sobic002G058900 Sobic002G101200--Sobic002G058900 Sobic007G037200 Sobic007G037200 Sobic002G101200--Sobic007G037200 Sobic002G166800 Sobic002G166800 Sobic002G101200--Sobic002G166800 Sobic002G101200--Sobic002G100000 Sobic002G101200--Sobic003G225800 Sobic006G031000 Sobic006G031000 Sobic002G101200--Sobic006G031000 Sobic002G101200--Sobic009G051201 Sobic002G217000--Sobic003G225800 Sobic002G217000--Sobic002G101200 Sobic002G217000--Sobic005G197000 Sobic002G217000--Sobic002G058900 Sobic002G217000--Sobic007G037200 Sobic002G217000--Sobic005G089101 Sobic002G217000--Sobic005G032500 Sobic002G217000--Sobic002G100000 Sobic006G004100 Sobic006G004100 Sobic002G217000--Sobic006G004100 Sobic001G059800 Sobic001G059800 Sobic001G297300--Sobic001G059800 Sobic002G059100 Sobic002G059100 Sobic001G297300--Sobic002G059100 Sobic010G010600 Sobic010G010600 Sobic001G297300--Sobic010G010600 Sobic001G297300--Sobic007G209700 Sobic001G297300--Sobic007G123000 Sobic002G211501 Sobic002G211501 Sobic001G297300--Sobic002G211501 Sobic010G216800 Sobic010G216800 Sobic001G297300--Sobic010G216800 Sobic006G279000 Sobic006G279000 Sobic001G297300--Sobic006G279000 Sobic001G234000 Sobic001G234000 Sobic001G297300--Sobic001G234000 Sobic005G089101--Sobic002G100000 Sobic005G089101--Sobic003G225800 Sobic005G089101--Sobic010G181900 Sobic005G089101--Sobic005G197000 Sobic005G089101--Sobic002G217000 Sobic005G089101--Sobic003G307600 Sobic005G089101--Sobic005G001500 Sobic005G089101--Sobic007G037200 Sobic005G089101--Sobic004G212350
Octagon: transcription factors


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