Gene annotation
Transcriptome id Sobic.010G010600.1
Synonym
Functional annotation -
UniProt C5Z2R9
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G216800 expressed protein -
2 Sobic.007G123000 sex determination protein tasselseed-2, putative, expressed -
3 Sobic.001G297300 - -
4 Sobic.010G209300 expressed protein -
5 Sobic.002G088000 cytokinin-N-glucosyltransferase 1, putative, expressed -
6 Sobic.006G271400 methyl-CpG binding domain containing protein, expressed -
7 Sobic.006G279000 expressed protein -
8 Sobic.008G001700 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@Phylogenetic analysis of cloned SbDof genes along with other reported Dof proteins. The 3D structural prediction of SbDof proteins based on multiple threading method.(PubMedID : 22476870)@"PBF1(Ortholog in maize:Lang et al., 2014)"(PubMedID : 31659911)@Upregulated in response to drought and salt stress(PubMedID : 27230576)@dof zinc finger domain containing protein, putative, expressed -
9 Sobic.001G059800 cupin domain containing protein, expressed -
10 Sobic.007G209700 - -
11 Sobic.002G408700 OsFBX259 - F-box domain containing protein, expressed -
12 Sobic.005G090500 - -
13 Sobic.002G211501 - -
14 Sobic.004G085100 mitochondrial carrier protein, putative, expressed -
15 Sobic.007G147300 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
16 Sobic.010G058000 myb-like DNA-binding domain, SHAQKYF class family protein, expressed -
17 Sobic.009G086800 no apical meristem protein, putative, expressed -
18 Sobic.001G362900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450 71D7, putative, expressed -
19 Sobic.009G021300 Jacalin-like lectin domain containing protein, putative, expressed -
20 Sobic.001G142600 OsFBX103 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic010G010600 Sobic010G010600 Sobic010G216800 Sobic010G216800 Sobic010G010600--Sobic010G216800 Sobic007G123000 Sobic007G123000 Sobic010G010600--Sobic007G123000 Sobic001G297300 Sobic001G297300 Sobic010G010600--Sobic001G297300 Sobic010G209300 Sobic010G209300 Sobic010G010600--Sobic010G209300 Sobic002G088000 Sobic002G088000 Sobic010G010600--Sobic002G088000 Sobic006G271400 Sobic006G271400 Sobic010G010600--Sobic006G271400 Sobic006G279000 Sobic006G279000 Sobic010G010600--Sobic006G279000 Sobic008G001700 Sobic008G001700 Sobic010G010600--Sobic008G001700 Sobic001G059800 Sobic001G059800 Sobic010G010600--Sobic001G059800 Sobic002G211501 Sobic002G211501 Sobic010G216800--Sobic002G211501 Sobic010G274300 Sobic010G274300 Sobic010G216800--Sobic010G274300 Sobic002G291132 Sobic002G291132 Sobic010G216800--Sobic002G291132 Sobic010G216800--Sobic010G010600 Sobic009G061800 Sobic009G061800 Sobic010G216800--Sobic009G061800 Sobic009G086800 Sobic009G086800 Sobic010G216800--Sobic009G086800 Sobic010G216800--Sobic002G088000 Sobic003G350900 Sobic003G350900 Sobic010G216800--Sobic003G350900 Sobic001G259300 Sobic001G259300 Sobic010G216800--Sobic001G259300 Sobic007G147300 Sobic007G147300 Sobic007G123000--Sobic007G147300 Sobic007G122932 Sobic007G122932 Sobic007G123000--Sobic007G122932 Sobic009G021300 Sobic009G021300 Sobic007G123000--Sobic009G021300 Sobic007G123000--Sobic008G001700 Sobic005G001500 Sobic005G001500 Sobic007G123000--Sobic005G001500 Sobic002G408700 Sobic002G408700 Sobic007G123000--Sobic002G408700 Sobic007G123000--Sobic010G209300 Sobic008G071900 Sobic008G071900 Sobic007G123000--Sobic008G071900 Sobic007G123000--Sobic009G086800 Sobic001G297300--Sobic001G059800 Sobic002G059100 Sobic002G059100 Sobic001G297300--Sobic002G059100 Sobic001G297300--Sobic010G010600 Sobic007G209700 Sobic007G209700 Sobic001G297300--Sobic007G209700 Sobic001G297300--Sobic007G123000 Sobic001G297300--Sobic002G211501 Sobic001G297300--Sobic010G216800 Sobic001G297300--Sobic006G279000 Sobic001G234000 Sobic001G234000 Sobic001G297300--Sobic001G234000 Sobic010G209300--Sobic002G408700 Sobic010G209300--Sobic007G122932 Sobic010G209300--Sobic009G021300 Sobic003G291100 Sobic003G291100 Sobic010G209300--Sobic003G291100 Sobic010G209300--Sobic005G001500 Sobic010G209300--Sobic006G271400 Sobic001G142600 Sobic001G142600 Sobic010G209300--Sobic001G142600 Sobic010G209300--Sobic007G147300 Sobic010G058000 Sobic010G058000 Sobic010G209300--Sobic010G058000 Sobic004G085100 Sobic004G085100 Sobic002G088000--Sobic004G085100 Sobic001G362900 Sobic001G362900 Sobic002G088000--Sobic001G362900 Sobic004G116200 Sobic004G116200 Sobic002G088000--Sobic004G116200 Sobic005G188000 Sobic005G188000 Sobic002G088000--Sobic005G188000 Sobic004G171500 Sobic004G171500 Sobic002G088000--Sobic004G171500 Sobic002G088000--Sobic008G001700 Sobic002G088000--Sobic003G350900 Sobic002G417900 Sobic002G417900 Sobic002G088000--Sobic002G417900 Sobic003G156100 Sobic003G156100 Sobic002G088000--Sobic003G156100 Sobic005G075000 Sobic005G075000 Sobic006G271400--Sobic005G075000 Sobic006G271400--Sobic010G209300 Sobic005G090500 Sobic005G090500 Sobic006G271400--Sobic005G090500 Sobic006G031000 Sobic006G031000 Sobic006G271400--Sobic006G031000 Sobic006G271400--Sobic010G058000 Sobic005G074900 Sobic005G074900 Sobic006G271400--Sobic005G074900 Sobic006G271400--Sobic002G408700 Sobic002G053100 Sobic002G053100 Sobic006G271400--Sobic002G053100 Sobic003G363300 Sobic003G363300 Sobic006G271400--Sobic003G363300 Sobic002G147500 Sobic002G147500 Sobic006G279000--Sobic002G147500 Sobic004G090300 Sobic004G090300 Sobic006G279000--Sobic004G090300 Sobic001G330600 Sobic001G330600 Sobic006G279000--Sobic001G330600 Sobic006G036201 Sobic006G036201 Sobic006G279000--Sobic006G036201 Sobic006G279000--Sobic005G074900 Sobic006G279000--Sobic003G363300 Sobic006G279000--Sobic005G075000 Sobic006G279000--Sobic006G271400 Sobic006G279000--Sobic001G234000 Sobic008G001700--Sobic004G171500 Sobic008G001700--Sobic008G071900 Sobic008G001700--Sobic001G362900 Sobic008G001700--Sobic004G116200 Sobic008G001700--Sobic009G021300 Sobic008G001700--Sobic004G085100 Sobic010G102900 Sobic010G102900 Sobic008G001700--Sobic010G102900 Sobic008G001700--Sobic007G147300 Sobic008G001700--Sobic002G088000 Sobic001G059800--Sobic001G297300 Sobic001G059800--Sobic002G059100 Sobic001G059800--Sobic002G211501 Sobic001G059800--Sobic010G216800 Sobic001G059800--Sobic010G010600 Sobic001G059800--Sobic010G274300 Sobic001G059800--Sobic001G234000 Sobic001G059800--Sobic007G123000 Sobic001G059800--Sobic007G209700
Octagon: transcription factors


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