Gene annotation
Transcriptome id Sobic.006G279000.1
Synonym Sb06g033980
Functional annotation expressed protein
UniProt C5YB37
Pfam -
Panther DB PTHR33527 PTHR33527:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os10g10320.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G147500 early fruit mRNA, putative, expressed -
2 Sobic.004G090300 OsFBX46 - F-box domain containing protein, expressed -
3 Sobic.001G330600 NAD dependent epimerase/dehydratase family protein, putative, expressed -
4 Sobic.006G036201 - -
5 Sobic.005G074900 LTPL33 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
6 Sobic.003G363300 hydrolase, alpha/beta fold family protein, putative, expressed -
7 Sobic.005G075000 LTPL33 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
8 Sobic.006G271400 methyl-CpG binding domain containing protein, expressed -
9 Sobic.001G234000 expressed protein -
10 Sobic.007G123000 sex determination protein tasselseed-2, putative, expressed -
11 Sobic.010G010600 - -
12 Sobic.007G147300 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
13 Sobic.010G209300 expressed protein -
14 Sobic.002G211501 - -
15 Sobic.009G013200 - -
16 Sobic.009G086800 no apical meristem protein, putative, expressed -
17 Sobic.002G291132 - -
18 Sobic.010G216800 expressed protein -
19 Sobic.007G122932 - -
20 Sobic.009G051301 - -


Gene co-expression network
sample Sobic006G279000 Sobic006G279000 Sobic002G147500 Sobic002G147500 Sobic006G279000--Sobic002G147500 Sobic004G090300 Sobic004G090300 Sobic006G279000--Sobic004G090300 Sobic001G330600 Sobic001G330600 Sobic006G279000--Sobic001G330600 Sobic006G036201 Sobic006G036201 Sobic006G279000--Sobic006G036201 Sobic005G074900 Sobic005G074900 Sobic006G279000--Sobic005G074900 Sobic003G363300 Sobic003G363300 Sobic006G279000--Sobic003G363300 Sobic005G075000 Sobic005G075000 Sobic006G279000--Sobic005G075000 Sobic006G271400 Sobic006G271400 Sobic006G279000--Sobic006G271400 Sobic001G234000 Sobic001G234000 Sobic006G279000--Sobic001G234000 Sobic002G147500--Sobic001G330600 Sobic009G013200 Sobic009G013200 Sobic002G147500--Sobic009G013200 Sobic007G147300 Sobic007G147300 Sobic002G147500--Sobic007G147300 Sobic002G147500--Sobic006G279000 Sobic007G122932 Sobic007G122932 Sobic002G147500--Sobic007G122932 Sobic007G123000 Sobic007G123000 Sobic002G147500--Sobic007G123000 Sobic002G147500--Sobic005G075000 Sobic009G086800 Sobic009G086800 Sobic002G147500--Sobic009G086800 Sobic010G209300 Sobic010G209300 Sobic002G147500--Sobic010G209300 Sobic004G090300--Sobic006G279000 Sobic004G090300--Sobic001G234000 Sobic004G090300--Sobic002G147500 Sobic002G291132 Sobic002G291132 Sobic004G090300--Sobic002G291132 Sobic001G530400 Sobic001G530400 Sobic004G090300--Sobic001G530400 Sobic004G187200 Sobic004G187200 Sobic004G090300--Sobic004G187200 Sobic002G211501 Sobic002G211501 Sobic004G090300--Sobic002G211501 Sobic004G090300--Sobic001G330600 Sobic004G090300--Sobic006G036201 Sobic001G330600--Sobic002G147500 Sobic001G330600--Sobic009G013200 Sobic001G330600--Sobic007G122932 Sobic001G330600--Sobic007G147300 Sobic001G330600--Sobic007G123000 Sobic001G330600--Sobic005G075000 Sobic001G330600--Sobic006G279000 Sobic001G330600--Sobic010G209300 Sobic009G021300 Sobic009G021300 Sobic001G330600--Sobic009G021300 Sobic006G036201--Sobic005G074900 Sobic009G051301 Sobic009G051301 Sobic006G036201--Sobic009G051301 Sobic006G036201--Sobic002G291132 Sobic006G036201--Sobic009G086800 Sobic006G036201--Sobic001G530400 Sobic004G196200 Sobic004G196200 Sobic006G036201--Sobic004G196200 Sobic009G061800 Sobic009G061800 Sobic006G036201--Sobic009G061800 Sobic005G148600 Sobic005G148600 Sobic006G036201--Sobic005G148600 Sobic006G036201--Sobic006G279000 Sobic005G074900--Sobic006G036201 Sobic005G074900--Sobic009G051301 Sobic005G074900--Sobic005G148600 Sobic005G074900--Sobic004G196200 Sobic005G090500 Sobic005G090500 Sobic005G074900--Sobic005G090500 Sobic005G074900--Sobic006G271400 Sobic005G074800 Sobic005G074800 Sobic005G074900--Sobic005G074800 Sobic005G074900--Sobic009G086800 Sobic005G074900--Sobic006G279000 Sobic003G363300--Sobic006G271400 Sobic003G363300--Sobic005G075000 Sobic003G363300--Sobic006G279000 Sobic003G363300--Sobic005G074900 Sobic003G363300--Sobic010G209300 Sobic003G363300--Sobic006G036201 Sobic003G363300--Sobic002G147500 Sobic006G031000 Sobic006G031000 Sobic003G363300--Sobic006G031000 Sobic003G363300--Sobic001G330600 Sobic005G075000--Sobic006G271400 Sobic005G075000--Sobic010G209300 Sobic005G075000--Sobic006G031000 Sobic005G003100 Sobic005G003100 Sobic005G075000--Sobic005G003100 Sobic005G075000--Sobic009G013200 Sobic005G075000--Sobic007G122932 Sobic005G075000--Sobic001G330600 Sobic009G051201 Sobic009G051201 Sobic005G075000--Sobic009G051201 Sobic003G291100 Sobic003G291100 Sobic005G075000--Sobic003G291100 Sobic006G271400--Sobic005G075000 Sobic006G271400--Sobic010G209300 Sobic006G271400--Sobic005G090500 Sobic006G271400--Sobic006G031000 Sobic010G058000 Sobic010G058000 Sobic006G271400--Sobic010G058000 Sobic006G271400--Sobic005G074900 Sobic002G408700 Sobic002G408700 Sobic006G271400--Sobic002G408700 Sobic002G053100 Sobic002G053100 Sobic006G271400--Sobic002G053100 Sobic006G271400--Sobic003G363300 Sobic001G234000--Sobic002G211501 Sobic001G234000--Sobic004G090300 Sobic007G064400 Sobic007G064400 Sobic001G234000--Sobic007G064400 Sobic001G234000--Sobic006G279000 Sobic001G234000--Sobic004G187200 Sobic001G234000--Sobic002G291132 Sobic001G234000--Sobic001G530400 Sobic001G234000--Sobic002G147500 Sobic010G274300 Sobic010G274300 Sobic001G234000--Sobic010G274300
Octagon: transcription factors


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