Gene annotation
Transcriptome id Sobic.009G013200.1
Synonym
Functional annotation -
UniProt A0A1Z5R0D2
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.009G013200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G330600 NAD dependent epimerase/dehydratase family protein, putative, expressed -
2 Sobic.007G122932 - -
3 Sobic.002G147500 early fruit mRNA, putative, expressed -
4 Sobic.003G213100 AAA-type ATPase family protein, putative, expressed -
5 Sobic.005G075000 LTPL33 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
6 Sobic.005G003100 expressed protein -
7 Sobic.007G123000 sex determination protein tasselseed-2, putative, expressed -
8 Sobic.009G051201 - -
9 Sobic.003G225800 AAA-type ATPase family protein, putative, expressed -
10 Sobic.003G291100 - -
11 Sobic.010G209300 expressed protein -
12 Sobic.007G147300 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
13 Sobic.002G408700 OsFBX259 - F-box domain containing protein, expressed -
14 Sobic.009G021300 Jacalin-like lectin domain containing protein, putative, expressed -
15 Sobic.007G054700 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed K08066: NFYC, nuclear transcription factor Y, gamma
16 Sobic.005G197000 RNA recognition motif containing protein, putative, expressed K14411: RNA-binding protein Musashi
17 Sobic.005G001500 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@Phylogenetic analysis of cloned SbDof genes along with other reported Dof proteins. The 3D structural prediction of SbDof proteins based on multiple threading method.(PubMedID : 22476870)@"PBF1(Ortholog in maize:Lang et al., 2014)"(PubMedID : 31659895)@Upregulated in response to drought and salt stress(PubMedID : 27230576)@dof zinc finger domain containing protein, putative, expressed -
18 Sobic.002G069800 OsFBX221 - F-box domain containing protein, expressed -
19 Sobic.005G052100 expressed protein -
20 Sobic.005G089101 - K08066: NFYC, nuclear transcription factor Y, gamma


Gene co-expression network
sample Sobic009G013200 Sobic009G013200 Sobic001G330600 Sobic001G330600 Sobic009G013200--Sobic001G330600 Sobic007G122932 Sobic007G122932 Sobic009G013200--Sobic007G122932 Sobic002G147500 Sobic002G147500 Sobic009G013200--Sobic002G147500 Sobic003G213100 Sobic003G213100 Sobic009G013200--Sobic003G213100 Sobic005G075000 Sobic005G075000 Sobic009G013200--Sobic005G075000 Sobic005G003100 Sobic005G003100 Sobic009G013200--Sobic005G003100 Sobic007G123000 Sobic007G123000 Sobic009G013200--Sobic007G123000 Sobic009G051201 Sobic009G051201 Sobic009G013200--Sobic009G051201 Sobic003G225800 Sobic003G225800 Sobic009G013200--Sobic003G225800 Sobic001G330600--Sobic002G147500 Sobic001G330600--Sobic009G013200 Sobic001G330600--Sobic007G122932 Sobic007G147300 Sobic007G147300 Sobic001G330600--Sobic007G147300 Sobic001G330600--Sobic007G123000 Sobic001G330600--Sobic005G075000 Sobic006G279000 Sobic006G279000 Sobic001G330600--Sobic006G279000 Sobic010G209300 Sobic010G209300 Sobic001G330600--Sobic010G209300 Sobic009G021300 Sobic009G021300 Sobic001G330600--Sobic009G021300 Sobic007G122932--Sobic009G021300 Sobic007G122932--Sobic007G147300 Sobic007G122932--Sobic007G123000 Sobic005G001500 Sobic005G001500 Sobic007G122932--Sobic005G001500 Sobic002G408700 Sobic002G408700 Sobic007G122932--Sobic002G408700 Sobic007G122932--Sobic010G209300 Sobic007G122932--Sobic009G013200 Sobic003G307600 Sobic003G307600 Sobic007G122932--Sobic003G307600 Sobic008G001700 Sobic008G001700 Sobic007G122932--Sobic008G001700 Sobic002G147500--Sobic001G330600 Sobic002G147500--Sobic009G013200 Sobic002G147500--Sobic007G147300 Sobic002G147500--Sobic006G279000 Sobic002G147500--Sobic007G122932 Sobic002G147500--Sobic007G123000 Sobic002G147500--Sobic005G075000 Sobic009G086800 Sobic009G086800 Sobic002G147500--Sobic009G086800 Sobic002G147500--Sobic010G209300 Sobic003G213100--Sobic003G225800 Sobic005G197000 Sobic005G197000 Sobic003G213100--Sobic005G197000 Sobic002G217000 Sobic002G217000 Sobic003G213100--Sobic002G217000 Sobic003G213100--Sobic009G051201 Sobic002G069800 Sobic002G069800 Sobic003G213100--Sobic002G069800 Sobic005G089101 Sobic005G089101 Sobic003G213100--Sobic005G089101 Sobic003G213100--Sobic005G003100 Sobic003G213100--Sobic009G013200 Sobic002G101200 Sobic002G101200 Sobic003G213100--Sobic002G101200 Sobic006G271400 Sobic006G271400 Sobic005G075000--Sobic006G271400 Sobic005G075000--Sobic010G209300 Sobic006G031000 Sobic006G031000 Sobic005G075000--Sobic006G031000 Sobic005G075000--Sobic005G003100 Sobic005G075000--Sobic009G013200 Sobic005G075000--Sobic007G122932 Sobic005G075000--Sobic001G330600 Sobic005G075000--Sobic009G051201 Sobic003G291100 Sobic003G291100 Sobic005G075000--Sobic003G291100 Sobic005G003100--Sobic003G213100 Sobic005G003100--Sobic002G069800 Sobic005G003100--Sobic009G051201 Sobic005G003100--Sobic005G075000 Sobic005G003100--Sobic003G225800 Sobic005G003100--Sobic009G013200 Sobic005G003100--Sobic002G101200 Sobic005G003100--Sobic002G217000 Sobic005G052100 Sobic005G052100 Sobic005G003100--Sobic005G052100 Sobic007G123000--Sobic007G147300 Sobic007G123000--Sobic007G122932 Sobic007G123000--Sobic009G021300 Sobic007G123000--Sobic008G001700 Sobic007G123000--Sobic005G001500 Sobic007G123000--Sobic002G408700 Sobic007G123000--Sobic010G209300 Sobic008G071900 Sobic008G071900 Sobic007G123000--Sobic008G071900 Sobic007G123000--Sobic009G086800 Sobic009G051201--Sobic003G213100 Sobic009G051201--Sobic003G225800 Sobic009G051201--Sobic002G101200 Sobic009G051201--Sobic002G217000 Sobic009G051201--Sobic005G197000 Sobic009G051201--Sobic002G069800 Sobic009G051201--Sobic005G003100 Sobic007G209700 Sobic007G209700 Sobic009G051201--Sobic007G209700 Sobic009G051201--Sobic009G013200 Sobic003G225800--Sobic005G197000 Sobic003G225800--Sobic003G213100 Sobic003G225800--Sobic002G217000 Sobic003G225800--Sobic005G089101 Sobic002G100000 Sobic002G100000 Sobic003G225800--Sobic002G100000 Sobic006G004100 Sobic006G004100 Sobic003G225800--Sobic006G004100 Sobic003G225800--Sobic002G101200 Sobic003G225800--Sobic003G307600 Sobic007G037200 Sobic007G037200 Sobic003G225800--Sobic007G037200
Octagon: transcription factors


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