Gene annotation
Transcriptome id Sobic.008G096401.1
Synonym -
Functional annotation -
UniProt A0A1Z5R6N3
Pfam PF01915 PF00933
Panther DB PTHR30620 PTHR30620:SF41
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT5G49360 : beta-xylosidase 1
RAP-DB (Rice) LOC_Os11g47350.1 : beta-D-xylosidase, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU4Hr1G028510.2 , HORVU4Hr1G028510.3 , HORVU4Hr1G028510.4
Wheat TraesCS4A02G173100 , TraesCS4A02G173100 , TraesCS4B02G143900 , TraesCS4B02G143900 , TraesCS4D02G142500 , TraesCS4D02G142500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G052700 hypothetical protein -
2 Sobic.007G120600 KED, putative, expressed -
3 Sobic.001G060001 - -
4 Sobic.004G181100 expressed protein -
5 Sobic.006G042800 expressed protein -
6 Sobic.010G267651 - -
7 Sobic.002G188800 anthocyanin 3-O-beta-glucosyltransferase, putative, expressed -
8 Sobic.010G146350 - -
9 Sobic.002G159400 expressed protein -
10 Sobic.005G207600 - -
11 Sobic.010G228200 expressed protein -
12 Sobic.006G088500 OsFBX135 - F-box domain containing protein, expressed -
13 Sobic.002G401301 - -
14 Sobic.004G274000 STE_MEK_ste7_MAP2K.4 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
15 Sobic.003G326100 nucleotide pyrophosphatase/phosphodiesterase, putative, expressed -
16 Sobic.007G007650 - -
17 Sobic.003G023100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@- -
18 Sobic.003G066250 - -
19 Sobic.001G190600 pleiotropic drug resistance protein 15, putative, expressed -
20 Sobic.003G120050 - -


Gene co-expression network
sample Sobic008G096401 Sobic008G096401 Sobic004G052700 Sobic004G052700 Sobic008G096401--Sobic004G052700 Sobic007G120600 Sobic007G120600 Sobic008G096401--Sobic007G120600 Sobic001G060001 Sobic001G060001 Sobic008G096401--Sobic001G060001 Sobic004G181100 Sobic004G181100 Sobic008G096401--Sobic004G181100 Sobic006G042800 Sobic006G042800 Sobic008G096401--Sobic006G042800 Sobic010G267651 Sobic010G267651 Sobic008G096401--Sobic010G267651 Sobic002G188800 Sobic002G188800 Sobic008G096401--Sobic002G188800 Sobic010G146350 Sobic010G146350 Sobic008G096401--Sobic010G146350 Sobic002G159400 Sobic002G159400 Sobic008G096401--Sobic002G159400 Sobic004G052700--Sobic008G096401 Sobic004G052700--Sobic007G120600 Sobic004G052700--Sobic001G060001 Sobic004G052700--Sobic004G181100 Sobic004G052700--Sobic006G042800 Sobic004G052700--Sobic010G267651 Sobic004G052700--Sobic002G188800 Sobic004G052700--Sobic010G146350 Sobic004G052700--Sobic002G159400 Sobic007G120600--Sobic004G052700 Sobic007G120600--Sobic008G096401 Sobic007G120600--Sobic001G060001 Sobic007G120600--Sobic010G146350 Sobic005G207600 Sobic005G207600 Sobic007G120600--Sobic005G207600 Sobic007G120600--Sobic010G267651 Sobic007G120600--Sobic004G181100 Sobic010G228200 Sobic010G228200 Sobic007G120600--Sobic010G228200 Sobic007G120600--Sobic002G188800 Sobic001G060001--Sobic007G120600 Sobic001G060001--Sobic004G052700 Sobic001G060001--Sobic008G096401 Sobic001G060001--Sobic010G146350 Sobic001G060001--Sobic005G207600 Sobic001G060001--Sobic010G228200 Sobic001G060001--Sobic004G181100 Sobic001G060001--Sobic010G267651 Sobic001G060001--Sobic006G042800 Sobic004G181100--Sobic006G042800 Sobic004G181100--Sobic002G188800 Sobic004G181100--Sobic002G159400 Sobic004G181100--Sobic008G096401 Sobic004G181100--Sobic004G052700 Sobic004G181100--Sobic007G120600 Sobic004G181100--Sobic010G267651 Sobic004G274000 Sobic004G274000 Sobic004G181100--Sobic004G274000 Sobic004G181100--Sobic001G060001 Sobic006G042800--Sobic002G159400 Sobic006G042800--Sobic004G181100 Sobic006G042800--Sobic002G188800 Sobic006G042800--Sobic008G096401 Sobic006G042800--Sobic004G052700 Sobic006G042800--Sobic007G120600 Sobic006G042800--Sobic010G267651 Sobic006G042800--Sobic004G274000 Sobic006G042800--Sobic001G060001 Sobic010G267651--Sobic002G188800 Sobic010G267651--Sobic007G120600 Sobic010G267651--Sobic008G096401 Sobic010G267651--Sobic004G052700 Sobic010G267651--Sobic004G181100 Sobic010G267651--Sobic001G060001 Sobic010G267651--Sobic006G042800 Sobic006G077900 Sobic006G077900 Sobic010G267651--Sobic006G077900 Sobic010G267651--Sobic002G159400 Sobic002G188800--Sobic004G181100 Sobic002G188800--Sobic010G267651 Sobic002G188800--Sobic006G042800 Sobic002G188800--Sobic002G159400 Sobic002G188800--Sobic008G096401 Sobic002G188800--Sobic004G052700 Sobic002G188800--Sobic004G274000 Sobic002G188800--Sobic007G120600 Sobic002G401301 Sobic002G401301 Sobic002G188800--Sobic002G401301 Sobic010G146350--Sobic005G207600 Sobic010G146350--Sobic010G228200 Sobic010G146350--Sobic007G120600 Sobic010G146350--Sobic001G060001 Sobic001G190600 Sobic001G190600 Sobic010G146350--Sobic001G190600 Sobic005G207550 Sobic005G207550 Sobic010G146350--Sobic005G207550 Sobic010G146350--Sobic004G052700 Sobic010G146350--Sobic008G096401 Sobic006G137900 Sobic006G137900 Sobic010G146350--Sobic006G137900 Sobic002G159400--Sobic006G042800 Sobic002G159400--Sobic004G181100 Sobic002G159400--Sobic002G188800 Sobic002G159400--Sobic008G096401 Sobic002G159400--Sobic004G052700 Sobic002G159400--Sobic004G274000 Sobic002G159400--Sobic007G120600 Sobic002G159400--Sobic010G267651 Sobic002G159400--Sobic001G060001
Octagon: transcription factors


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